Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M21.2
(1272 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 304 4e-82
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 304 5e-82
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 304 5e-82
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 303 8e-82
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 296 1e-79
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 36 0.24
BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open readi... 34 1.3
BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open readi... 34 1.3
AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open readi... 34 1.3
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 8.9
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 304 bits (747), Expect = 4e-82
Identities = 143/218 (65%), Positives = 167/218 (76%)
Frame = +2
Query: 128 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 307
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 308 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 487
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132
Query: 488 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 667
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+
Sbjct: 133 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 192
Query: 668 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 193 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 230
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 230 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 289
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 290 NYNLPMHKM 298
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 304 bits (746), Expect = 5e-82
Identities = 143/217 (65%), Positives = 166/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 276 NYNLPMHKM 284
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 303 bits (744), Expect = 8e-82
Identities = 143/217 (65%), Positives = 165/217 (76%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
+GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 67.3 bits (157), Expect = 1e-10
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IW +SAF +L L+G+W+ +
Sbjct: 216 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKS 275
Query: 960 NXNLXQPKM 986
N NL +M
Sbjct: 276 NYNLPMHEM 284
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 296 bits (727), Expect = 1e-79
Identities = 142/217 (65%), Positives = 164/217 (75%)
Frame = +2
Query: 131 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 310
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 311 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 490
HQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 491 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 670
++GH IE+ PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 671 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 781
I KVY SQR+RAGKGKMRN RRIQR+GP II+N+D G
Sbjct: 180 IKKVYASQRMRAGKGKMRN-RRIQRRGPCIIYNEDNG 215
Score = 71.3 bits (167), Expect = 7e-12
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 780 GLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLXPLFGSWKTPSKQXX 959
G+ +AFRNIPG+ APGGH+GRF IWT+SAF +L L+G+W+ +
Sbjct: 215 GIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKS 274
Query: 960 NXNLXQPKM 986
N NL KM
Sbjct: 275 NYNLPMHKM 283
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 36.3 bits (80), Expect = 0.24
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 550 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 449
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 1.3
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -3
Query: 643 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 488
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 487 SEVDATVPAPPGL 449
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 1.3
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -3
Query: 643 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 488
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 487 SEVDATVPAPPGL 449
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.9 bits (74), Expect = 1.3
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -3
Query: 643 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 488
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 487 SEVDATVPAPPGL 449
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 8.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 127 ESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTS 234
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,094,781
Number of Sequences: 237096
Number of extensions: 3296116
Number of successful extensions: 8076
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8046
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18220302130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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