Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M20.2
         (1251 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   4.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   6.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   8.3  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = +1

Query: 691 ESSHDLCESLKIDYDDQTNEWLNEVKPN 774
           ++S+  C++L+  +D+Q +  ++   PN
Sbjct: 203 DNSYQFCDNLQYSFDNQCSGTIDWALPN 230


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 616 LELNCDSAAAYKFRG--RAYRLLGKFEESSHD 705
           L L CDSA +   +     Y+L+ KF E SH+
Sbjct: 291 LVLICDSAKSESQQTVFLCYKLMEKFPERSHE 322


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +1

Query: 691 ESSHDLCESLKIDYDDQTNEWLNEVKPNAE 780
           ++S+  C++L+  +D+Q +  ++   P  E
Sbjct: 194 DNSYQFCDNLQYSFDNQCSGTIDWALPKQE 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,565
Number of Sequences: 336
Number of extensions: 3929
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36685677
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)