Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M20.2
         (1251 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   5.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   5.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   7.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   9.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   9.7  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 976 GIPPGTLGMPPGKPGNPRV 920
           G P  +L  PP +PG PR+
Sbjct: 129 GPPSVSLSSPPREPGTPRI 147


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 580 CLVLDTPVPV*QTTKHSVDLIVWL 509
           CL L+  VP  +T   S+ +I W+
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWI 128


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 580 CLVLDTPVPV*QTTKHSVDLIVWL 509
           CL L+  VP  +T   S+ +I W+
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWI 128


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 742 FDHHSQSLRIHKDRGKI 692
           FD    +LRIH+ RG +
Sbjct: 298 FDEERLTLRIHRGRGSV 314


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +2

Query: 959 CPWWYACW 982
           C WW  CW
Sbjct: 488 CCWWKICW 495


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +2

Query: 959 CPWWYACW 982
           C WW  CW
Sbjct: 541 CCWWKICW 548


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,487
Number of Sequences: 438
Number of extensions: 4602
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42742428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)