Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M19.2
         (1302 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1412 + 26893221-26893613,26894205-26894587,26894697-268948...   154   2e-37
04_03_0791 + 19685720-19685914,19686436-19686459,19686823-196872...   139   4e-33

>08_02_1412 +
           26893221-26893613,26894205-26894587,26894697-26894814,
           26894998-26895192,26895318-26895542,26895773-26895832,
           26895956-26896036,26896142-26896547,26896730-26896965
          Length = 698

 Score =  154 bits (373), Expect = 2e-37
 Identities = 68/137 (49%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = +2

Query: 581 RAKMEDLIKRRFFYDQSFAIYGGITGQFDFGPMGCALKSNMIHLWKKFFILQEQMLEVEC 760
           R  + + ++R+ FY  SF IY G+ G +D+GP GCA+K+N++  W++ F+L+E MLEV+C
Sbjct: 85  RQAVVNTLERKLFYIPSFKIYRGVAGLYDYGPPGCAVKANVLAFWRQHFVLEENMLEVDC 144

Query: 761 SILTPEPVLKASGHVERFADLMTKDIKTGECFRLDHLIKGHL-EKIKSDKNTKIELKAEI 937
             +TPE VLKASGHVE+F DLM KD KTG C+R DHL+K H  EK++ D     E  AE+
Sbjct: 145 PCVTPEVVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDHCKEKLEKDLTLSPEKAAEL 204

Query: 938 EDILIKLDGMNADEMSA 988
           + +L  LD ++ADE+ A
Sbjct: 205 KHVLAVLDDLSADELGA 221


>04_03_0791 +
           19685720-19685914,19686436-19686459,19686823-19687205,
           19687282-19687379,19687622-19687800,19687912-19688136,
           19688619-19688678,19688816-19688896,19688983-19689388,
           19690035-19690285
          Length = 633

 Score =  139 bits (337), Expect = 4e-33
 Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 9/145 (6%)
 Frame = +2

Query: 581 RAKMEDLIKRRFFYDQSFAIYGGITGQFDFGPMGCALKSNMIHLWKKF--------FILQ 736
           R  + + ++RR FY  SF IYGG+ G +D+GP GCA+K+N++  W++         F+L+
Sbjct: 19  RVAVTNTLERRLFYVPSFKIYGGVAGLYDYGPPGCAVKANVLAFWRQMCRSTRYLHFVLE 78

Query: 737 EQMLEVECSILTPEPVLKASGHVERFADLMTKDIKTGECFRLDHLIKGHL-EKIKSDKNT 913
           E MLEV+C  +TPE VLKASGHV++F DLM KD KTG C+R DHL+K    +K++ D   
Sbjct: 79  EGMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKDKLEKDNTL 138

Query: 914 KIELKAEIEDILIKLDGMNADEMSA 988
             E  AE   +L  LD ++A+++ A
Sbjct: 139 SPEKTAEFNHVLAVLDDLSAEQLGA 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,199,857
Number of Sequences: 37544
Number of extensions: 354630
Number of successful extensions: 683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)