Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M18.2
         (1279 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X6T3 Cluster: Putative uncharacterized protein; n=1; ...    40   0.18 
UniRef50_Q8VAY0 Cluster: Wsv239; n=1; Shrimp white spot syndrome...    39   0.24 
UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep...    38   0.74 
UniRef50_Q0V5Y9 Cluster: Predicted protein; n=1; Phaeosphaeria n...    37   1.3  
UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    36   1.7  
UniRef50_Q16JP6 Cluster: Eukaryotic translation initiation facto...    35   3.9  
UniRef50_Q10M51 Cluster: Retrotransposon protein, putative, Ty1-...    35   5.2  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    35   5.2  

>UniRef50_Q4X6T3 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium chabaudi|Rep: Putative uncharacterized protein
            - Plasmodium chabaudi
          Length = 141

 Score = 39.5 bits (88), Expect = 0.18
 Identities = 18/46 (39%), Positives = 18/46 (39%)
 Frame = -2

Query: 1080 PXPPXFXKXXXFXPPFXGXXPPPXXFFFFXXXPXXPPXXXXPPPPL 943
            P PP F        PF    PPP   F     P  PP    PPPPL
Sbjct: 52   PFPPPFPSPIPTPSPFFSFQPPPTPPFASLAPPLFPPIPRFPPPPL 97


>UniRef50_Q8VAY0 Cluster: Wsv239; n=1; Shrimp white spot syndrome
            virus|Rep: Wsv239 - White spot syndrome virus (WSSV)
          Length = 127

 Score = 39.1 bits (87), Expect = 0.24
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = -2

Query: 1080 PXPPXFXKXXXFXPPFXGXXPPPXXFFFFXXXPXXPPXXXXPPPP 946
            P PP F     F PP     PPP  F      P  PP    PPPP
Sbjct: 30   PFPPPFPFPPPFVPPPPPSPPPPPPFVVPEPFPFVPPPPPSPPPP 74



 Score = 35.9 bits (79), Expect = 2.2
 Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = -3

Query: 1109 FXPXXXXXXXPXPPXFXKXXF-FXPLFXGXXPPPXXFFFFXXXPXXPPXXXXPPPPXP 939
            F P       P PP      F F P      PPP  F      P  PP    PPPP P
Sbjct: 41   FVPPPPPSPPPPPPFVVPEPFPFVPPPPPSPPPPPPFVVPVPFPFVPPPPPSPPPPPP 98



 Score = 35.5 bits (78), Expect = 3.0
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
 Frame = -2

Query: 1080 PXPPXFX--KXXXFXPPFXGXXPPPXXFFFFXXXPXXPPXXXXPPPP 946
            P PP F   +   F PP     PPP  F      P  PP    PPPP
Sbjct: 50   PPPPPFVVPEPFPFVPPPPPSPPPPPPFVVPVPFPFVPPPPPSPPPP 96


>UniRef50_Q5C113 Cluster: SJCHGC03128 protein; n=4; Eukaryota|Rep:
            SJCHGC03128 protein - Schistosoma japonicum (Blood fluke)
          Length = 145

 Score = 37.5 bits (83), Expect = 0.74
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = +3

Query: 948  GGGGXXXGGGXXXXXKKKKXXGGGGXPXKK 1037
            GGGG   GGG     KKKK  GGGG   KK
Sbjct: 99   GGGGPPGGGGGLSFFKKKKGRGGGGAQKKK 128



 Score = 33.9 bits (74), Expect = 9.1
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +2

Query: 944  RGGGGXXXXGGXXGXXKKKKXFXGGGXXPKKGG 1042
            +GGGG    GG     KKKK   GGG   KK G
Sbjct: 98   KGGGGPPGGGGGLSFFKKKKGRGGGGAQKKKRG 130


>UniRef50_Q0V5Y9 Cluster: Predicted protein; n=1; Phaeosphaeria
            nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
            (Septoria nodorum)
          Length = 305

 Score = 36.7 bits (81), Expect = 1.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = -2

Query: 1080 PXPPXFXKXXXFXPPFXGXXPPPXXFFFFXXXPXXPPXXXXPPPP 946
            P PP + +     PP  G  PPP    +    P  PP    PPPP
Sbjct: 75   PPPPGYGEPPPPPPPGYGEQPPPPPPGYAAEPPPPPPGMQPPPPP 119


>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
            shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome 13 SCAF15000, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 36.3 bits (80), Expect = 1.7
 Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
 Frame = -2

Query: 1113 FFFXXXXXXXXPXPPXFXKXXXFXPPFXGXXPPPXXFF--FFXXXPXXPPXXXXPPPP 946
            FFF        P PP       + PP     PPP   F  F    P  PP    PPPP
Sbjct: 148  FFFFPFSFFPPPFPPSPPLSPPYFPPPPPLPPPPFPLFPLFPPPPPPPPPPPFSPPPP 205


>UniRef50_Q16JP6 Cluster: Eukaryotic translation initiation factor 4
            gamma; n=1; Aedes aegypti|Rep: Eukaryotic translation
            initiation factor 4 gamma - Aedes aegypti (Yellowfever
            mosquito)
          Length = 674

 Score = 35.1 bits (77), Expect = 3.9
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = +3

Query: 945  GGGGGXXXGGGXXXXXKKKKXXGGGGXPXKK 1037
            GGGGG   GGG     KK    GGGG   KK
Sbjct: 633  GGGGGSKGGGGYGGGNKKSGGGGGGGGSGKK 663


>UniRef50_Q10M51 Cluster: Retrotransposon protein, putative, Ty1-copia
            subclass; n=6; Oryza sativa (japonica
            cultivar-group)|Rep: Retrotransposon protein, putative,
            Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
          Length = 1061

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 945  GGGGGXXXGGGXXXXXKKKKXXGGGGXPXKKGXK 1046
            GGGGG   GGG     ++++  GGGG   ++G +
Sbjct: 18   GGGGGGGGGGGGGKRRRRRRRSGGGGEGGREGLR 51


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
            japonicum|Rep: SJCHGC03138 protein - Schistosoma
            japonicum (Blood fluke)
          Length = 156

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 15/32 (46%), Positives = 15/32 (46%)
 Frame = -3

Query: 1040 PLFXGXXPPPXXFFFFXXXPXXPPXXXXPPPP 945
            PLF    PPP   FFF      PP    PPPP
Sbjct: 27   PLFFYGAPPPPPPFFFNKKKRPPPPPGGPPPP 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,397,719
Number of Sequences: 1657284
Number of extensions: 6125427
Number of successful extensions: 53724
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34135
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130389636398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)