Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M09.2
(1319 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 55 5e-06
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 55 5e-06
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 55 5e-06
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 55 5e-06
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 55 5e-06
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 55 5e-06
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 54 1e-05
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 54 1e-05
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 52 3e-05
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 42 0.027
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 38 0.44
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 35 4.1
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 35 5.4
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 34 7.2
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 187 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 215
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 201 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 229
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 54.8 bits (126), Expect = 5e-06
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HAKR TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHAKRKTVTAMDVVYALKRQGRTL 98
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 53.6 bits (123), Expect = 1e-05
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 219 AVTYTEHARRKTVTAMDVVYALKRQGRTL 247
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 53.6 bits (123), Expect = 1e-05
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 252 AVTYTEHARRKTVTAMDVVYALKRQGRTL 280
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 52.4 bits (120), Expect = 3e-05
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
+VTYT HAKR TVTA+DVVYALKRQG TL
Sbjct: 74 SVTYTEHAKRKTVTALDVVYALKRQGKTL 102
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 42.3 bits (95), Expect = 0.027
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
A+ YT HA+R TV AMDVVYALK+ G L
Sbjct: 74 AIIYTEHAQRNTVQAMDVVYALKKYGRNL 102
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 38.3 bits (85), Expect = 0.44
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R T+TAMDVVY QG TL
Sbjct: 43 AVTYTEHARRKTLTAMDVVY----QGRTL 67
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 35.1 bits (77), Expect = 4.1
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 299 TYTAHAKRXTVTAMDVVYALKRQGXTL 379
+Y AKR T+ +DVVYALKRQG L
Sbjct: 76 SYADCAKRKTIIPLDVVYALKRQGRNL 102
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 34.7 bits (76), Expect = 5.4
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 278 TLSGXAVTYTAHAKRXTVTAMDVVYALKRQG 370
TLS A Y HAKR T+T D++++LKR G
Sbjct: 68 TLS-IACIYATHAKRKTITCSDILHSLKRMG 97
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 34.3 bits (75), Expect = 7.2
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
+ YT +A++ TVTA DVV AL++QG L
Sbjct: 68 STAYTEYARKKTVTACDVVNALRKQGHIL 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,620,603
Number of Sequences: 1657284
Number of extensions: 3143472
Number of successful extensions: 5515
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5499
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 136058751024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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