Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M09.2
(1319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 54 3e-07
09_06_0213 - 21610887-21611198 54 3e-07
09_04_0227 + 15861410-15861721 54 3e-07
07_03_0825 + 21773710-21774021 54 3e-07
05_05_0150 + 22758060-22758371 54 3e-07
05_05_0128 - 22591720-22592031 54 3e-07
04_04_0926 - 29462363-29462674 54 3e-07
03_01_0134 + 1060551-1060862 54 3e-07
02_05_0333 - 28012829-28013140 54 3e-07
01_06_1262 + 35833882-35834193 54 3e-07
05_05_0130 - 22598744-22599043,22599296-22599307 46 7e-05
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495... 30 4.7
>10_08_0780 - 20500344-20500655
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>09_06_0213 - 21610887-21611198
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>09_04_0227 + 15861410-15861721
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>07_03_0825 + 21773710-21774021
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>05_05_0150 + 22758060-22758371
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>05_05_0128 - 22591720-22592031
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>04_04_0926 - 29462363-29462674
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>03_01_0134 + 1060551-1060862
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>02_05_0333 - 28012829-28013140
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>01_06_1262 + 35833882-35834193
Length = 103
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
AVTYT HA+R TVTAMDVVYALKRQG TL
Sbjct: 70 AVTYTEHARRKTVTAMDVVYALKRQGRTL 98
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 180 PAIRXXARRGGVXRXSGL 233
PAIR ARRGGV R SGL
Sbjct: 33 PAIRRLARRGGVKRISGL 50
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 46.0 bits (104), Expect = 7e-05
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2
Query: 293 AVTYTAHAKRXTVTAMDVVYALKRQGXTL 379
A+TYT HA R TV AMDVVYALK QG T+
Sbjct: 70 AITYTEHAHRKTVMAMDVVYALKLQGRTI 98
>09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,
4954991-4955167,4955705-4955761,4955988-4956174,
4956910-4957055,4957213-4957395,4957860-4957970,
4959386-4959505,4959596-4959740,4960001-4960164,
4960816-4960902,4961062-4961390,4963426-4963507,
4963616-4963746,4963976-4964225,4965112-4965393,
4966780-4966986
Length = 1087
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 343 VHGCYGXPFSVRCVSNRXPG*RARE 269
+HG +G P +V C+S + PG R R+
Sbjct: 947 LHGLFGSPPNVSCISFKLPGRRGRD 971
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,179,720
Number of Sequences: 37544
Number of extensions: 106352
Number of successful extensions: 202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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