BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M08.2
(1396 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 0.61
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 27 1.2
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 2.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 3.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 3.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 29 5.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.9
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 5.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.9
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 29 5.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 29 5.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 29 5.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.9
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 5.9
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 5.9
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 5.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 5.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 5.9
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 24 7.2
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 24 8.1
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 576 PPPPPPPPP 584
Score = 26.6 bits (56), Expect(2) = 0.61
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 1283 PPPPPPPP 1306
PPPPPPPP
Sbjct: 589 PPPPPPPP 596
Score = 24.6 bits (51), Expect(2) = 0.61
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 1265 GAXXXXPPPPPPP 1303
G PPPPPPP
Sbjct: 555 GTNVPIPPPPPPP 567
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical protein
ZC168.5 protein.
Length = 172
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 1281 PPPPPPPP 1304
PPPPPPPP
Sbjct: 39 PPPPPPPP 46
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1287 PPPPPPP 1307
PPPPPPP
Sbjct: 54 PPPPPPP 60
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like (grd
related) protein29 protein.
Length = 172
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 1253 GXXGGAXXXXPPPPPPPP 1306
G GG PPPPPPPP
Sbjct: 56 GYGGGYGCGIPPPPPPPP 73
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 1263 GGXXXXPPPPPPPPP 1307
G PPPPPPPPP
Sbjct: 149 GATSSAPPPPPPPPP 163
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 2 PPPPPPPPP 10
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 3 PPPPPPPPP 11
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 4 PPPPPPPPP 12
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 5 PPPPPPPPP 13
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 6 PPPPPPPPP 14
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 7 PPPPPPPPP 15
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 8 PPPPPPPPP 16
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 9 PPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 1263 GGXXXXPPPPPPPPP 1307
G PPPPPPPPP
Sbjct: 149 GATSSAPPPPPPPPP 163
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 2 PPPPPPPPP 10
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 3 PPPPPPPPP 11
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 4 PPPPPPPPP 12
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 5 PPPPPPPPP 13
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 6 PPPPPPPPP 14
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 7 PPPPPPPPP 15
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 8 PPPPPPPPP 16
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 9 PPPPPPPPP 17
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 1266 GXXXXPPPPPPPPP 1307
G PPPPPPPPP
Sbjct: 243 GAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 1266 GXXXXPPPPPPPPP 1307
G PPPPPPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 1266 GXXXXPPPPPPPPP 1307
G PPPPPPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 357 PPPPPPPPP 365
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 358 PPPPPPPPP 366
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 359 PPPPPPPPP 367
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 360 PPPPPPPPP 368
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 361 PPPPPPPPP 369
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 362 PPPPPPPPP 370
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical protein
Y45F10B.13b protein.
Length = 618
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 250 PPPPPPPPP 258
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 251 PPPPPPPPP 259
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical protein
Y45F10B.13a protein.
Length = 633
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 265 PPPPPPPPP 273
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 266 PPPPPPPPP 274
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical protein
F49B2.3 protein.
Length = 322
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 264 PPPPPPPPP 272
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical protein
R06C1.3 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 358 PPPPPPPPP 366
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical protein
F42G4.3a protein.
Length = 603
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 3 PPPPPPPPP 11
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical protein
C15C6.3 protein.
Length = 541
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 476 PPPPPPPPP 484
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 576 PPPPPPPPP 584
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 577 PPPPPPPPP 585
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
F07A11.4 protein.
Length = 1095
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 360 PPPPPPPPP 368
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 361 PPPPPPPPP 369
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 362 PPPPPPPPP 370
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 765 PPPPPPPPP 773
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 766 PPPPPPPPP 774
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 808 PPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 765 PPPPPPPPP 773
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 766 PPPPPPPPP 774
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 808 PPPPPPPPP 816
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 302 PPPPPPPPP 310
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 303 PPPPPPPPP 311
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 304 PPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 302 PPPPPPPPP 310
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 303 PPPPPPPPP 311
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 304 PPPPPPPPP 312
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical protein
W03B1.9 protein.
Length = 633
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 445 PPPPPPPPP 453
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical protein
W03B1.5 protein.
Length = 581
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 393 PPPPPPPPP 401
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 609 PPPPPPPPP 617
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 630 PPPPPPPPP 638
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 649 PPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 435 PPPPPPPPP 443
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 456 PPPPPPPPP 464
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 475 PPPPPPPPP 483
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 140 PPPPPPPPP 148
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 141 PPPPPPPPP 149
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 63 PPPPPPPPP 71
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 64 PPPPPPPPP 72
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 769 PPPPPPPPP 777
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1281 PPPPPPP 1301
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1287 PPPPPPP 1307
PPPPPPP
Sbjct: 742 PPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 769 PPPPPPPPP 777
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1281 PPPPPPP 1301
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1287 PPPPPPP 1307
PPPPPPP
Sbjct: 742 PPPPPPP 748
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 512 PPPPPPPPP 520
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 513 PPPPPPPPP 521
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 514 PPPPPPPPP 522
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 515 PPPPPPPPP 523
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 51 PPPPPPPPP 59
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 52 PPPPPPPPP 60
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 754 PPPPPPPPP 762
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 5.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 1262 GGAXXXXPPPPPPPP 1306
GG PPPPPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 250 PPPPPPPPP 258
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 251 PPPPPPPPP 259
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 265 PPPPPPPPP 273
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 266 PPPPPPPPP 274
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 5.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 1262 GGAXXXXPPPPPPPP 1306
GG PPPPPPPP
Sbjct: 667 GGLGGFMPPPPPPPP 681
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 67 PPPPPPPPP 75
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 84 PPPPPPPPP 92
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 85 PPPPPPPPP 93
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 352 PPPPPPPPP 360
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1281 PPPPPPP 1301
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 1287 PPPPPPP 1307
PPPPPPP
Sbjct: 325 PPPPPPP 331
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 141 PPPPPPPPP 149
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 142 PPPPPPPPP 150
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 1338 PPPPPPPPP 1346
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 1339 PPPPPPPPP 1347
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 1340 PPPPPPPPP 1348
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 791 PPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 690 PPPPPPPPP 698
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 84 PPPPPPPPP 92
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 1012 PPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.5 bits (63), Expect = 5.9
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PPPPPPPPP
Sbjct: 251 PPPPPPPPP 259
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 23.8 bits (49), Expect(2) = 7.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 1253 GXXGGAXXXXPPPPPPPP 1306
G G A PP PPPP
Sbjct: 215 GTSGSAKKKVRPPAPPPP 232
Score = 23.8 bits (49), Expect(2) = 7.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 1283 PPPPPPPPXR 1312
PP PPPPP +
Sbjct: 226 PPAPPPPPTK 235
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 24.2 bits (50), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1266 GXXXXPPPPPPPP 1304
G PPP PPPP
Sbjct: 383 GLQTPPPPAPPPP 395
Score = 23.0 bits (47), Expect(2) = 8.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 1281 PPPPPPPPP 1307
PP PPPP P
Sbjct: 389 PPAPPPPAP 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,800,681
Number of Sequences: 27780
Number of extensions: 108793
Number of successful extensions: 6903
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2973
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3954537640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -