Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M05.2
         (1300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 13/46 (28%), Positives = 14/46 (30%)
 Frame = -2

Query: 528 FPPXFXEXPFPPXGGGXPXXPPPXPGAXXFXGGEXXGXPXTXPXXP 391
           FP  F   P        P  PP  P      GG   G   + P  P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -2

Query: 540 FFXGFPPXFXEXPFPPXGGGXPXXPPPXPGAXXFXGGEXXGXP 412
           F  GFP      P P      P  PPP P A    GG     P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = -3

Query: 482 GXPXPPPQXXGPXXFXGGXGXG-PXKPTPXPPGXXXXFXPXKPXPPPP 342
           G P P PQ   P    G    G P +P P  PG      P  P P  P
Sbjct: 184 GMP-PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.148    0.481 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,171
Number of Sequences: 2352
Number of extensions: 8728
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149601402
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)