Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M04.2
(1487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein. 114 7e-25
BT009796-1|AAP88798.1| 333|Homo sapiens electron-transfer-flavo... 114 7e-25
BC095457-1|AAH95457.1| 333|Homo sapiens electron-transfer-flavo... 114 7e-25
BC015526-1|AAH15526.1| 333|Homo sapiens electron-transfer-flavo... 114 7e-25
AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer flavo... 114 7e-25
>J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein.
Length = 333
Score = 114 bits (275), Expect = 7e-25
Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Frame = +1
Query: 838 IKVITVRGTAFPAEPLEGGSAAIDKAPEGEL*ELI-WLN--F*SRN*PNLTDQNSLVLRN 1008
+KV +VRGT+F A GGSA+ +KA E+ WL+ + P LT +
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGA-----KV 217
Query: 1009 IVSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
+VSGGRGLKSG+NFKLLYDLAD+L+A VGASRAAVDAGFVPND+++GQ GK+VA
Sbjct: 218 VVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVA 271
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 789 TIYAGNAILTLEAKESYQGHHCSWYSIPCRAVGGRVCSN**ST*GRTIRTDLVEFLKQEL 968
TIYAGNA+ T++ E + S A G S+ T ++ E+L Q+L
Sbjct: 147 TIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASS--EKASSTSPVEISEWLDQKL 204
Query: 969 TKSDRPELTSAK 1004
TKSDRPELT AK
Sbjct: 205 TKSDRPELTGAK 216
>BT009796-1|AAP88798.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 114 bits (275), Expect = 7e-25
Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Frame = +1
Query: 838 IKVITVRGTAFPAEPLEGGSAAIDKAPEGEL*ELI-WLN--F*SRN*PNLTDQNSLVLRN 1008
+KV +VRGT+F A GGSA+ +KA E+ WL+ + P LT +
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGA-----KV 217
Query: 1009 IVSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
+VSGGRGLKSG+NFKLLYDLAD+L+A VGASRAAVDAGFVPND+++GQ GK+VA
Sbjct: 218 VVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVA 271
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 789 TIYAGNAILTLEAKESYQGHHCSWYSIPCRAVGGRVCSN**ST*GRTIRTDLVEFLKQEL 968
TIYAGNA+ T++ E + S A G S+ T ++ E+L Q+L
Sbjct: 147 TIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASS--EKASSTSPVEISEWLDQKL 204
Query: 969 TKSDRPELTSAK 1004
TKSDRPELT AK
Sbjct: 205 TKSDRPELTGAK 216
>BC095457-1|AAH95457.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 114 bits (275), Expect = 7e-25
Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Frame = +1
Query: 838 IKVITVRGTAFPAEPLEGGSAAIDKAPEGEL*ELI-WLN--F*SRN*PNLTDQNSLVLRN 1008
+KV +VRGT+F A GGSA+ +KA E+ WL+ + P LT +
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGA-----KV 217
Query: 1009 IVSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
+VSGGRGLKSG+NFKLLYDLAD+L+A VGASRAAVDAGFVPND+++GQ GK+VA
Sbjct: 218 VVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVA 271
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 789 TIYAGNAILTLEAKESYQGHHCSWYSIPCRAVGGRVCSN**ST*GRTIRTDLVEFLKQEL 968
TIYAGNA+ T++ E + S A G S+ T ++ E+L Q+L
Sbjct: 147 TIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASS--EKASSTSPVEISEWLDQKL 204
Query: 969 TKSDRPELTSAK 1004
TKSDRPELT AK
Sbjct: 205 TKSDRPELTGAK 216
>BC015526-1|AAH15526.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 114 bits (275), Expect = 7e-25
Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Frame = +1
Query: 838 IKVITVRGTAFPAEPLEGGSAAIDKAPEGEL*ELI-WLN--F*SRN*PNLTDQNSLVLRN 1008
+KV +VRGT+F A GGSA+ +KA E+ WL+ + P LT +
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGA-----KV 217
Query: 1009 IVSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
+VSGGRGLKSG+NFKLLYDLAD+L+A VGASRAAVDAGFVPND+++GQ GK+VA
Sbjct: 218 VVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVA 271
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 789 TIYAGNAILTLEAKESYQGHHCSWYSIPCRAVGGRVCSN**ST*GRTIRTDLVEFLKQEL 968
TIYAGNA+ T++ E + S A G S+ T ++ E+L Q+L
Sbjct: 147 TIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASS--EKASSTSPVEISEWLDQKL 204
Query: 969 TKSDRPELTSAK 1004
TKSDRPELT AK
Sbjct: 205 TKSDRPELTGAK 216
>AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer
flavoprotein alpha-subunit protein.
Length = 333
Score = 114 bits (275), Expect = 7e-25
Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Frame = +1
Query: 838 IKVITVRGTAFPAEPLEGGSAAIDKAPEGEL*ELI-WLN--F*SRN*PNLTDQNSLVLRN 1008
+KV +VRGT+F A GGSA+ +KA E+ WL+ + P LT +
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGA-----KV 217
Query: 1009 IVSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
+VSGGRGLKSG+NFKLLYDLAD+L+A VGASRAAVDAGFVPND+++GQ GK+VA
Sbjct: 218 VVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVA 271
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 789 TIYAGNAILTLEAKESYQGHHCSWYSIPCRAVGGRVCSN**ST*GRTIRTDLVEFLKQEL 968
TIYAGNA+ T++ E + S A G S+ T ++ E+L Q+L
Sbjct: 147 TIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASS--EKASSTSPVEISEWLDQKL 204
Query: 969 TKSDRPELTSAK 1004
TKSDRPELT AK
Sbjct: 205 TKSDRPELTGAK 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,234,167
Number of Sequences: 237096
Number of extensions: 1896514
Number of successful extensions: 5772
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5109
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22033271868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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