Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M04.2
         (1487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical p...   118   1e-26
Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical pr...   118   1e-26

>Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical
            protein F27D4.1 protein.
          Length = 332

 Score =  118 bits (283), Expect = 1e-26
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
 Frame = +1

Query: 835  PIKVITVRGTAF-PAEPLEGGSAAIDKAPEGEL*ELIWLNF*SRN*PNLTDQNSLVLRNI 1011
            PIK++T RGT+F PA+  EGGS A++ AP  ++ +     F  +        +    + +
Sbjct: 163  PIKLLTFRGTSFEPAK--EGGSGAVENAPSADI-KTDLSEFLGQELSKSERPDLATAKVV 219

Query: 1012 VSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
            VSGGRGLKSGDNFKL+YDLADKL A VGASRAAVDAG+VPND+++GQ GK+VA
Sbjct: 220  VSGGRGLKSGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVA 272


>Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical protein
            F27D4.1 protein.
          Length = 332

 Score =  118 bits (283), Expect = 1e-26
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
 Frame = +1

Query: 835  PIKVITVRGTAF-PAEPLEGGSAAIDKAPEGEL*ELIWLNF*SRN*PNLTDQNSLVLRNI 1011
            PIK++T RGT+F PA+  EGGS A++ AP  ++ +     F  +        +    + +
Sbjct: 163  PIKLLTFRGTSFEPAK--EGGSGAVENAPSADI-KTDLSEFLGQELSKSERPDLATAKVV 219

Query: 1012 VSGGRGLKSGDNFKLLYDLADKLNAXVGASRAAVDAGFVPNDLKIGQXGKMVA 1170
            VSGGRGLKSGDNFKL+YDLADKL A VGASRAAVDAG+VPND+++GQ GK+VA
Sbjct: 220  VSGGRGLKSGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVA 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,369,986
Number of Sequences: 27780
Number of extensions: 270039
Number of successful extensions: 661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4277144658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)