Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M02.2
         (1237 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1261 + 27410921-27413401                                         34   0.26 
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    33   0.35 
01_01_0115 - 856957-858055,858479-858538,858802-859583                 29   10.0 

>12_02_1261 + 27410921-27413401
          Length = 826

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
 Frame = +2

Query: 224 CYNKNXFKHA------SFVNSRRALQSGADKITRTFRSVRNTFGNLSQXXXXXXXXXXXX 385
           C  +N F +A      SFVNSR AL+ G   + RT +  +N  G+ S             
Sbjct: 341 CSTENAFTNAAVETSDSFVNSRAALKPGKCALKRTRKQGQNEGGSSSTKTEKRGKKSPAA 400

Query: 386 AEAGSPCRTPSTPVMKKKQLLGRSPTK 466
           A       TP+ P+ + +    RSPTK
Sbjct: 401 ALGCGVTITPAIPIRQARAEDIRSPTK 427


>01_01_0588 +
           4372877-4372949,4374328-4376262,4376940-4377015,
           4378900-4378970,4379038-4379144,4379241-4379711,
           4379791-4379976,4380132-4380425,4380820-4381434,
           4382219-4382615,4382768-4382850,4383397-4383567,
           4384046-4384243,4384754-4385314,4385401-4385460,
           4385553-4385869,4385980-4386403,4386539-4387006,
           4387093-4387209,4387306-4387427,4387506-4388247,
           4388453-4388485,4388625-4388879,4388975-4389160,
           4390115-4390453,4391293-4392045
          Length = 3017

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -3

Query: 674 RWECKLCR*FTNGWFIGTTLVASSWLECAMSVSNLYDVLVIIRDL 540
           +WEC      ++G+ IG  L+ +  + C +   N+ D+LV++ +L
Sbjct: 226 QWECLKVLPSSSGYLIGLVLIRNEPVSCEVHQRNMKDILVVVIEL 270


>01_01_0115 - 856957-858055,858479-858538,858802-859583
          Length = 646

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -2

Query: 573 PLRRFGDNP*SGVSGIYGDILNSRPCGVSIPNGLYSFVGLLPSNCFFFI 427
           P RR GD P  GV+       + +P  + I NG Y  + +   +  F++
Sbjct: 53  PFRRRGDPPECGVASYELTCTDDKPATIQIDNGTYLVMDIKYKDSTFWV 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,024,632
Number of Sequences: 37544
Number of extensions: 518120
Number of successful extensions: 1094
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)