Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M02.2
         (1237 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118966-1|AAM50826.1|  604|Drosophila melanogaster LD44821p pro...    31   2.5  

>AY118966-1|AAM50826.1|  604|Drosophila melanogaster LD44821p
           protein.
          Length = 604

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -1

Query: 823 MMLKSLKKYTINFIKKKFTHNLFCNLYRNSNNNYLAYVKIILRKRQS 683
           M LK+L++    F KK+FT N + N Y++  ++++    IILR   S
Sbjct: 535 MELKNLER----FFKKQFTRNYYPNFYQHCQDDFIDVRAIILRCENS 577


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,532,718
Number of Sequences: 53049
Number of extensions: 888228
Number of successful extensions: 1942
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6600886020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)