Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M02.2
         (1237 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42439-2|AAA83506.1|  162|Caenorhabditis elegans Hypothetical pr...    29   6.8  
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    29   9.0  
AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical...    29   9.0  
AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    29   9.0  

>U42439-2|AAA83506.1|  162|Caenorhabditis elegans Hypothetical
           protein F19C7.5 protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
 Frame = +3

Query: 693 FRSIILTYAK*LLFEFR*RLQNKL*VNFFLMKL-IVYFFNDFNIIVI*RWRLGKYY-RPI 866
           F ++ + +     F+F+  +      N FL+ L +V F   F      +W    Y   P+
Sbjct: 22  FLAVTVLFTTVFPFDFKPNITFSKYENIFLIILWVVIFLLHFLPSYYSKWFPANYVISPV 81

Query: 867 TGWHSSVPVFKLKPCTVXINWRLITGV*RNVP 962
             + S++   +L  CT+  NWR       NVP
Sbjct: 82  VSFSSNICCIRL--CTILANWRYKKSAGGNVP 111


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -2

Query: 543 SGVSGIYGDILNSRPCGVSIPNGLYSFVGLL---PSNCFFFITGVDG 412
           +G+ G Y + L +  CGV +P   YS+  +     S+C++ I   +G
Sbjct: 412 TGLEGTYCERLQTSNCGVELPRADYSWRNISYSGSSDCYWRIVSANG 458


>AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18b protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 452 RSPTKLYSPFGIETPQGREFRMSPYMPDTPDHGLSPKRRKGLTHSWHILAKKRPRA 619
           +   K+Y    ++TP+  +   S Y  +TP       R   ++HS  ++   +P+A
Sbjct: 113 KKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISHSSDVIRPSQPKA 168


>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 452 RSPTKLYSPFGIETPQGREFRMSPYMPDTPDHGLSPKRRKGLTHSWHILAKKRPRA 619
           +   K+Y    ++TP+  +   S Y  +TP       R   ++HS  ++   +P+A
Sbjct: 473 KKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSISHSSDVIRPSQPKA 528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,931,622
Number of Sequences: 27780
Number of extensions: 463655
Number of successful extensions: 935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)