Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L24.2
         (1207 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.21 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    27   0.21 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.86 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   1.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   4.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   4.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   6.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 513 LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 617
           L  +  D EP HP+R      F  +R  F  NA++
Sbjct: 367 LTLIATDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 513 LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 617
           L  +  D EP HP+R      F  +R  F  NA++
Sbjct: 367 LTLIATDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -1

Query: 910 LFYFILVIK---WWFYFISLSFDIHMTLYV 830
           LFY +L+I    ++FY+  + F +H+ L V
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHLLLLV 256



 Score = 25.0 bits (52), Expect = 1.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -3

Query: 722 YYFSMITFRHCCKSKLKILIVYLICRPFFTVFFGKFFC 609
           Y    I + +C      + +++L+C  +FTV    F+C
Sbjct: 51  YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHL-LFYC 87



 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -1

Query: 919 CGHLFYF---ILVIKWWFYFISLSFDIHMTLYVLQLLF 815
           C + FY+   IL+  ++FY+  + F +H+ L++L + +
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFIIFTVHL-LFLLCIYY 135



 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -1

Query: 937 HKF*VYCGHLFYFILVIKWWFYFISLSFDIHMTLYVLQLLFM 812
           + F ++  HL   +LV  ++FY++ L F     ++ + LLF+
Sbjct: 243 YAFILFTVHLL--LLVCIYYFYYMHLLFCCAFIIFTMHLLFL 282



 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/19 (36%), Positives = 17/19 (89%)
 Frame = -1

Query: 883 WWFYFISLSFDIHMTLYVL 827
           ++FY +S++F++H+ L++L
Sbjct: 57  YYFYCVSITFNVHL-LFLL 74


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 12/149 (8%)
 Frame = -3

Query: 785 YQYSLVIYFNINIVKAKQ*IFYYFSMITFRHCCKSKLKILIVYLICRPFFTVFFGKFFCI 606
           YQ+ L + +   +V     +FY +++I      + + K++ + +    FF+    +   +
Sbjct: 30  YQFFLAVQYPRIVVSTFNIVFYMYTLIL-----EERFKLINLIIKQEEFFSPKIKRMVLL 84

Query: 605 LCKFLPIFEKFFG*FRPQWMLWFWI--------IHKSH*CLDNLISLGSRLPIFCTNDGQ 450
               + + +     F PQ +LW  +        +H     L N + LG + P+       
Sbjct: 85  HKTLVRVAKSLNQVFAPQLLLWVLLGVMVVTVDLHVFFFTLFNKL-LG-QYPVGIVGVKN 142

Query: 449 AHL----TLFINVRVVNLCFETNFRGFEW 375
           A L     +F++ R   LC E N   F W
Sbjct: 143 ASLFIFDLIFLSFRCTKLCKEANKTAFLW 171


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
 Frame = +3

Query: 288 LTWQGLIVPDNPPYNKGAFRIEI-NFPAEYPFKPPKISFKTKIYHP 422
           + W    V  +P +    F     + P  YP  PP  +     YHP
Sbjct: 133 IAWPYAAVYTDPAFAASIFHAAATSLPLHYPPPPPVYTHHYARYHP 178


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 840 HYMYFNCYLWVELII 796
           H  Y  CYLWV ++I
Sbjct: 170 HEFYGFCYLWVLILI 184


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 474 WKPATKTDQVIQALVALVNDPEPE 545
           W+P  KTD    ALV+  +D E +
Sbjct: 150 WEPKNKTDDDDDALVSDSDDREKD 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,082
Number of Sequences: 336
Number of extensions: 5026
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35144262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)