Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L24.2
         (1207 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    25   1.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   1.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   7.1  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 659 YLIC-RPFFTVFFGKFFCILCKFLPIFEKFF 570
           +++C  PFFT++  + FC  C    +F   F
Sbjct: 18  FILCWLPFFTMYLVRAFCRNCIHPTVFSVLF 48


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 659 YLIC-RPFFTVFFGKFFCILCKFLPIFEKFF 570
           +++C  PFFT++  + FC  C    +F   F
Sbjct: 466 FILCWLPFFTMYLVRAFCRNCIHPTVFSVLF 496


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 728 IFYYFSMITFRHCCKSKLKILIVYLIC 648
           +FY  S   FR   +    I+  +L+C
Sbjct: 345 VFYIISRYVFRSALEDYCNIVATHLVC 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,496
Number of Sequences: 438
Number of extensions: 5620
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41211342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)