Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L23.2
         (1238 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0203 + 12986685-12988691                                         29   7.6  

>06_02_0203 + 12986685-12988691
          Length = 668

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +3

Query: 492 PIAETTPSVQAKTPVKRK---ATDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVE 662
           P A TT   +A  PV      A DE +  +T+G+H    +  Q  T +     + +   +
Sbjct: 492 PPATTTLDAEAAMPVPNSNAIAADEAHGNATAGEHDKKETAEQTTTTSASTVGQQQEARD 551

Query: 663 NLGGDVKL 686
            +G  VKL
Sbjct: 552 QVGQLVKL 559


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,549,543
Number of Sequences: 37544
Number of extensions: 375476
Number of successful extensions: 791
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3817805856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)