Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L21.2
(1264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 391 e-109
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 391 e-109
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 390 e-109
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 390 e-109
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 390 e-109
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 386 e-107
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 386 e-107
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 386 e-107
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 383 e-106
AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical... 33 0.57
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 32 0.75
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 391 bits (962), Expect = e-109
Identities = 201/292 (68%), Positives = 228/292 (78%), Gaps = 7/292 (2%)
Frame = +2
Query: 128 SKIGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQ 304
+ +GINGFGR+GRLVLRA++ K QVVA N PFI + MV LFKY STHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 XGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 469
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 470 VIISAPSADAPMFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 646
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 647 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 826
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 243
Query: 827 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
+VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 244 PDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSD 295
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 391 bits (962), Expect = e-109
Identities = 201/292 (68%), Positives = 228/292 (78%), Gaps = 7/292 (2%)
Frame = +2
Query: 128 SKIGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQ 304
+ +GINGFGR+GRLVLRA++ K QVVA N PFI + MV LFKY STHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 XGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 469
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 470 VIISAPSADAPMFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 646
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 647 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 826
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 243
Query: 827 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
+VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 244 PDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSD 295
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 390 bits (961), Expect = e-109
Identities = 200/292 (68%), Positives = 228/292 (78%), Gaps = 7/292 (2%)
Frame = +2
Query: 128 SKIGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQ 304
+ +GINGFGR+GRLVLRA++ K QVVA N PFI + MV LFKY STHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 XGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 469
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 470 VIISAPSADAPMFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 646
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 647 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 826
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 243
Query: 827 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
+VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 244 PDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSD 295
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 390 bits (961), Expect = e-109
Identities = 200/292 (68%), Positives = 228/292 (78%), Gaps = 7/292 (2%)
Frame = +2
Query: 128 SKIGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQ 304
+ +GINGFGR+GRLVLRA++ K QVVA N PFI + MV LFKY STHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 XGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 469
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 470 VIISAPSADAPMFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 646
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 647 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 826
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 243
Query: 827 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
+VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 244 PDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSD 295
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 390 bits (961), Expect = e-109
Identities = 200/292 (68%), Positives = 228/292 (78%), Gaps = 7/292 (2%)
Frame = +2
Query: 128 SKIGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQ 304
+ +GINGFGR+GRLVLRA++ K QVVA N PFI + MV LFKY STHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 XGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 469
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 470 VIISAPSADAPMFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 646
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 647 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPV 826
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPT 243
Query: 827 ANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
+VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 244 PDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSD 295
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 386 bits (949), Expect = e-107
Identities = 196/290 (67%), Positives = 228/290 (78%), Gaps = 7/290 (2%)
Frame = +2
Query: 134 IGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQXG 310
+GINGFGR+GRLVLRA++ K + VVA N PFI + MV LF+Y STHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 475
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 476 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 652
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 653 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVAN 832
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPD 245
Query: 833 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 246 VSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSD 295
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 386 bits (949), Expect = e-107
Identities = 196/290 (67%), Positives = 228/290 (78%), Gaps = 7/290 (2%)
Frame = +2
Query: 134 IGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQXG 310
+GINGFGR+GRLVLRA++ K + VVA N PFI + MV LF+Y STHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 475
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 476 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 652
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 653 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVAN 832
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPD 245
Query: 833 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 246 VSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSD 295
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 386 bits (949), Expect = e-107
Identities = 196/290 (67%), Positives = 228/290 (78%), Gaps = 7/290 (2%)
Frame = +2
Query: 134 IGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQXG 310
+GINGFGR+GRLVLRA++ K + VVA N PFI + MV LF+Y STHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 475
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 476 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 652
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 653 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVAN 832
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPD 245
Query: 833 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 246 VSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSD 295
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 383 bits (942), Expect = e-106
Identities = 195/290 (67%), Positives = 227/290 (78%), Gaps = 7/290 (2%)
Frame = +2
Query: 134 IGINGFGRMGRLVLRASLXKGA-QVVAXNAPFIGLXSMVXLFKYXSTHGRFKGSVEVQXG 310
+GINGFGR+GRLVLRA++ K + V A N PFI + MV LF+Y STHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 475
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 476 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 652
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 653 XXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVAN 832
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP LNGKLTGMAFRVP +
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPD 245
Query: 833 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEXQVVSSXFMGD 982
VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTE QVVS+ F+ D
Sbjct: 246 VSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSD 295
>AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical
protein Y71H2AM.3 protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.57
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 833 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPL 925
V+V D +R+G P + EA+ ++ KEAA GP+
Sbjct: 62 VNVTDNYIRIGAPPTPEALIKREKEAANGPM 92
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 32.3 bits (70), Expect = 0.75
Identities = 24/85 (28%), Positives = 32/85 (37%)
Frame = -2
Query: 933 MPFKGPSAASLTFCLMAS*LAGFPRRTVRSTTDTLATGTRNAIPVSLPLRAGITLPTALA 754
+P P+AA C A+ A P + TD+ RNA A P
Sbjct: 445 VPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPAD 504
Query: 753 APVEAGMMFC*APRPSRHNFPEGPS 679
APVE + AP P+ P P+
Sbjct: 505 APVEQAPVAVPAPAPAAAPAPAAPA 529
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/82 (28%), Positives = 31/82 (37%)
Frame = -2
Query: 933 MPFKGPSAASLTFCLMAS*LAGFPRRTVRSTTDTLATGTRNAIPVSLPLRAGITLPTALA 754
+P P+AA C A+ A P + TD+ RNA A P
Sbjct: 117 VPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPAD 176
Query: 753 APVEAGMMFC*APRPSRHNFPE 688
APVE + AP P+ P+
Sbjct: 177 APVEQAPVAVPAPAPAAAPAPD 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,588,302
Number of Sequences: 27780
Number of extensions: 428334
Number of successful extensions: 868
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3516412346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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