Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L20.2
         (1326 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118662-1|AAM50031.1|  642|Drosophila melanogaster SD10038p pro...   189   9e-48
AF289995-1|AAG02460.1|  642|Drosophila melanogaster thyroid horm...   189   9e-48
AF244916-1|AAF63336.1|  642|Drosophila melanogaster mediator tra...   189   9e-48
AE014297-2456|AAF55506.1|  642|Drosophila melanogaster CG7957-PA...   189   9e-48
BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p pro...    30   8.2  
AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-P...    30   8.2  

>AY118662-1|AAM50031.1|  642|Drosophila melanogaster SD10038p
           protein.
          Length = 642

 Score =  189 bits (460), Expect = 9e-48
 Identities = 90/154 (58%), Positives = 111/154 (72%)
 Frame = +3

Query: 510 ESSSDTKSDEXNKDQSYQSSLWPWXSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPVQ 689
           E S+   +DE      +Q SLWPW +VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+ 
Sbjct: 59  EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPLL 118

Query: 690 PEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASEXMRMARNMPDFHIDLLRLRQNWR 869
            E  +++P+VQVY RKK           G ERLR +   +  RN+ DFHI+LLRLRQNWR
Sbjct: 119 EEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFHIELLRLRQNWR 178

Query: 870 LKKVSNTIIGDLSYRTAGSKFSQTGVFEVTKAPE 971
           LKKVSN IIGDLSYRTAGSKF  +G FEVTKA E
Sbjct: 179 LKKVSNAIIGDLSYRTAGSKFGMSGTFEVTKAEE 212


>AF289995-1|AAG02460.1|  642|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP80 protein.
          Length = 642

 Score =  189 bits (460), Expect = 9e-48
 Identities = 90/154 (58%), Positives = 111/154 (72%)
 Frame = +3

Query: 510 ESSSDTKSDEXNKDQSYQSSLWPWXSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPVQ 689
           E S+   +DE      +Q SLWPW +VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+ 
Sbjct: 59  EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPLL 118

Query: 690 PEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASEXMRMARNMPDFHIDLLRLRQNWR 869
            E  +++P+VQVY RKK           G ERLR +   +  RN+ DFHI+LLRLRQNWR
Sbjct: 119 EEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFHIELLRLRQNWR 178

Query: 870 LKKVSNTIIGDLSYRTAGSKFSQTGVFEVTKAPE 971
           LKKVSN IIGDLSYRTAGSKF  +G FEVTKA E
Sbjct: 179 LKKVSNAIIGDLSYRTAGSKFGMSGTFEVTKAEE 212


>AF244916-1|AAF63336.1|  642|Drosophila melanogaster mediator
           transcriptional cofactorTRAP80 protein.
          Length = 642

 Score =  189 bits (460), Expect = 9e-48
 Identities = 90/154 (58%), Positives = 111/154 (72%)
 Frame = +3

Query: 510 ESSSDTKSDEXNKDQSYQSSLWPWXSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPVQ 689
           E S+   +DE      +Q SLWPW +VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+ 
Sbjct: 59  EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPLL 118

Query: 690 PEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASEXMRMARNMPDFHIDLLRLRQNWR 869
            E  +++P+VQVY RKK           G ERLR +   +  RN+ DFHI+LLRLRQNWR
Sbjct: 119 EEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFHIELLRLRQNWR 178

Query: 870 LKKVSNTIIGDLSYRTAGSKFSQTGVFEVTKAPE 971
           LKKVSN IIGDLSYRTAGSKF  +G FEVTKA E
Sbjct: 179 LKKVSNAIIGDLSYRTAGSKFGMSGTFEVTKAEE 212


>AE014297-2456|AAF55506.1|  642|Drosophila melanogaster CG7957-PA
           protein.
          Length = 642

 Score =  189 bits (460), Expect = 9e-48
 Identities = 90/154 (58%), Positives = 111/154 (72%)
 Frame = +3

Query: 510 ESSSDTKSDEXNKDQSYQSSLWPWXSVRNKLRSALTEVSVLADVLNIAKEKRYMVLDPVQ 689
           E S+   +DE      +Q SLWPW +VRNKL+ ALTE+ VL+DV++IAK+KRY+VLDP+ 
Sbjct: 59  EKSAAAAADEDKDATQFQESLWPWDAVRNKLKDALTEICVLSDVISIAKDKRYLVLDPLL 118

Query: 690 PEKVESRPMVQVYGRKKXXXXXXXXXXXGMERLRASEXMRMARNMPDFHIDLLRLRQNWR 869
            E  +++P+VQVY RKK           G ERLR +   +  RN+ DFHI+LLRLRQNWR
Sbjct: 119 EEADDTKPIVQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFHIELLRLRQNWR 178

Query: 870 LKKVSNTIIGDLSYRTAGSKFSQTGVFEVTKAPE 971
           LKKVSN IIGDLSYRTAGSKF  +G FEVTKA E
Sbjct: 179 LKKVSNAIIGDLSYRTAGSKFGMSGTFEVTKAEE 212


>BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p protein.
          Length = 1324

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 783  RLRASEXMRMARNMPDFHI-DLLRLRQNWRLKK-VSNTIIGDLSYRTAGSKFSQTGVFEV 956
            RL  +   R  R   DF + +  RL Q+  L +  SN   G+L   T  + F+   +   
Sbjct: 903  RLLKNALRRSYRKGKDFFLAEKQRLAQSLNLSRDQSNQTDGELDSSTYYANFNVDSLLND 962

Query: 957  TKAPEEQIAQAMSM 998
            +  P EQ+AQA+S+
Sbjct: 963  SLNPNEQLAQAVSI 976


>AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-PA
            protein.
          Length = 1324

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 783  RLRASEXMRMARNMPDFHI-DLLRLRQNWRLKK-VSNTIIGDLSYRTAGSKFSQTGVFEV 956
            RL  +   R  R   DF + +  RL Q+  L +  SN   G+L   T  + F+   +   
Sbjct: 903  RLLKNALRRSYRKGKDFFLAEKQRLAQSLNLSRDQSNQTDGELDSSTYYANFNVDSLLND 962

Query: 957  TKAPEEQIAQAMSM 998
            +  P EQ+AQA+S+
Sbjct: 963  SLNPNEQLAQAVSI 976


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,531,807
Number of Sequences: 53049
Number of extensions: 615591
Number of successful extensions: 1064
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7212079170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)