Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L18.2
         (1257 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7DWG3 Cluster: Cell wall glycoprotein GP2; n=4; Chlamy...    36   2.9  
UniRef50_Q3HYB9 Cluster: Proline-and threonine-rich protein; n=2...    35   3.8  
UniRef50_Q6K8Z4 Cluster: Diaphanous homologue-like; n=6; Oryza s...    34   8.9  

>UniRef50_A7DWG3 Cluster: Cell wall glycoprotein GP2; n=4;
            Chlamydomonas reinhardtii|Rep: Cell wall glycoprotein GP2
            - Chlamydomonas reinhardtii
          Length = 1226

 Score = 35.5 bits (78), Expect = 2.9
 Identities = 20/70 (28%), Positives = 21/70 (30%)
 Frame = -1

Query: 597  PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFPKALK 418
            PP  P  P  PP        P   P  P P P     A   P    P PP     P   +
Sbjct: 979  PPPSPPPPAPPPPSPPPPVPPPPSPPPPSPPPPSPPPAAASPPPSPPPPPPPSPPPPVAR 1038

Query: 417  TSPXXPYTXN 388
              P  P   N
Sbjct: 1039 LPPWPPLPVN 1048


>UniRef50_Q3HYB9 Cluster: Proline-and threonine-rich protein; n=2;
           Coccidioides|Rep: Proline-and threonine-rich protein -
           Coccidioides posadasii
          Length = 281

 Score = 35.1 bits (77), Expect = 3.8
 Identities = 20/66 (30%), Positives = 21/66 (31%)
 Frame = -1

Query: 597 PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFPKALK 418
           PP  P  P  PP        P   P  P P P     +   P    P PP     P A K
Sbjct: 101 PPPPPPPPPPPPPAPTTTQAPQYPPPPPPPPPPAPTTSKAAPPPPPPPPPPPPPAPPAPK 160

Query: 417 TSPXXP 400
            S   P
Sbjct: 161 PSKPAP 166


>UniRef50_Q6K8Z4 Cluster: Diaphanous homologue-like; n=6; Oryza
           sativa|Rep: Diaphanous homologue-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 1391

 Score = 33.9 bits (74), Expect = 8.9
 Identities = 19/66 (28%), Positives = 24/66 (36%)
 Frame = -1

Query: 597 PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFPKALK 418
           PP  P  P  PP+ + +   P   P  P   P    +A   P    P PP +    K   
Sbjct: 729 PPPPPPPPPPPPFPVSSFSPPQPPPQPPSAVPGL--QASPVPPPPPPPPPPMIPGMKTPP 786

Query: 417 TSPXXP 400
           T P  P
Sbjct: 787 TPPPPP 792


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,012,130
Number of Sequences: 1657284
Number of extensions: 2099130
Number of successful extensions: 6634
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5528
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127555079085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)