Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L18.2
         (1257 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           30   4.4  
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518...    29   5.8  
07_03_1160 - 24430240-24431268                                         29   7.7  
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978...    29   7.7  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 22/77 (28%), Positives = 25/77 (32%)
 Frame = -1

Query: 639 PXXXPFXXLXSXRXPPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXT 460
           P   P+        PP  P  P  PPY +     P   P  P P P         P   +
Sbjct: 87  PPTPPYVPSPPPYVPPYIP--PPTPPY-VPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPS 143

Query: 459 PXPPXLXRFPKALKTSP 409
           P P      P A KT P
Sbjct: 144 PPPYVPPPSPPATKTCP 160


>08_02_0110 +
           12650328-12650552,12650827-12651423,12651480-12651857,
           12651997-12652218,12652407-12652483,12652553-12652631,
           12652920-12653105
          Length = 587

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/68 (26%), Positives = 20/68 (29%)
 Frame = -1

Query: 597 PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFPKALK 418
           PP  P  P  PP       +P   P  P P P         P    P P      P  L+
Sbjct: 205 PPRIPVSPSRPPVVASPRDSPIASPSRPEP-PVASPPGPEPPVASPPVPEPQVASPPVLE 263

Query: 417 TSPXXPYT 394
                P T
Sbjct: 264 PPVASPQT 271


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/70 (25%), Positives = 23/70 (32%)
 Frame = -1

Query: 609 SXRXPPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFP 430
           S +  P  P  P  PP  + N      QP  P P P    +    P      PP   + P
Sbjct: 215 STQPNPNGPSIPNQPPQPIPNGPIKPDQP--PQPNPDMPPKPDQPPQPCPDGPPKPDQPP 272

Query: 429 KALKTSPXXP 400
           +     P  P
Sbjct: 273 QPNPNGPPKP 282


>06_01_1155 +
           9777611-9777808,9777899-9780132,9780218-9780469,
           9780550-9780660,9780750-9780831,9781106-9781297
          Length = 1022

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/66 (27%), Positives = 22/66 (33%)
 Frame = -1

Query: 609 SXRXPPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEAXXCPXXXTPXPPXLXRFP 430
           S R PP  P     PP       +P  QP  P P P              P PP +   P
Sbjct: 578 SPRHPPSPPPLRS-PPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSP 636

Query: 429 KALKTS 412
              ++S
Sbjct: 637 PTPQSS 642


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,080,086
Number of Sequences: 37544
Number of extensions: 76047
Number of successful extensions: 265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3887643768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)