Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L18.2
         (1257 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        32   5.0  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     32   5.0  

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
 Frame = -1

Query: 648 AXTPXXXPFXXLXSXRX--PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEA--- 484
           A  P   P   L S      P  P     PP       TP  QP  P P P     +   
Sbjct: 64  AAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPP 123

Query: 483 XXCPXXXTPXPPXLXRFPKALKTSPXXP 400
              P   +P PP L   P     SP  P
Sbjct: 124 LVAPTPSSPPPPPLPPPPPPAMPSPPPP 151


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
 Frame = -1

Query: 648 AXTPXXXPFXXLXSXRX--PPXXPXFPGXPPYXLXNXXTPXXQPDXPXPXPXXXXEA--- 484
           A  P   P   L S      P  P     PP       TP  QP  P P P     +   
Sbjct: 609 AAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPP 668

Query: 483 XXCPXXXTPXPPXLXRFPKALKTSPXXP 400
              P   +P PP L   P     SP  P
Sbjct: 669 LVAPTPSSPPPPPLPPPPPPAMPSPPPP 696


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,482,807
Number of Sequences: 237096
Number of extensions: 441833
Number of successful extensions: 998
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17945070980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)