Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L15.2
         (1425 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           25   3.7  
07_01_0080 + 587674-588510                                             30   5.1  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   6.8  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   6.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.8  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 24.6 bits (51), Expect(2) = 3.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 932 PPXXXXKXGGXPPPPXGP 879
           PP       G PPPP GP
Sbjct: 190 PPGVPPAFPGGPPPPPGP 207



 Score = 24.2 bits (50), Expect(2) = 3.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 905 GXPPPPXGPQ 876
           G PPPP GPQ
Sbjct: 244 GMPPPPPGPQ 253


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 961 GGGXXKKKXPPPXXXKKXGGXPPPPXGP 878
           G G  ++  PPP      G  PPPP  P
Sbjct: 84  GDGMFRRPPPPPPPPPSSGSPPPPPPPP 111


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 934 PPPXXXKKXGGXPPPPXGP 878
           PPP    K GG PPPP  P
Sbjct: 625 PPPPPPGKPGGPPPPPPRP 643


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 934 PPPXXXKKXGGXPPPPXGP 878
           PPP    K GG PPPP  P
Sbjct: 930 PPPPPPGKPGGPPPPPPPP 948


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -3

Query: 934 PPPXXXKKXGGXPPPPXG 881
           PPP   KK G  PPPP G
Sbjct: 367 PPPPGGKKGGPPPPPPKG 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,890,716
Number of Sequences: 37544
Number of extensions: 291268
Number of successful extensions: 799
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4513220012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)