Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L15.2
(1425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 90 3e-18
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 83 5e-16
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 83 5e-16
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 72 9e-13
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 72 9e-13
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 59 7e-09
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 30 4.6
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 30 4.6
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 90.2 bits (214), Expect = 3e-18
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Frame = +3
Query: 93 STPQXSRNXXAGYXKLQXIRL*VAC*RSTLPGXXXDXLXNTXSSXGSTLLDCIQSGVENL 272
+TP+ ++ Y KLQ + + L + + G+TLLD IQSG ENL
Sbjct: 3 ATPEVQKSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENL 62
Query: 273 DSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXTDXHPXXNXGD--VYTLGNLXPAGEC 446
DSGVGIY PDAESY +F L +P+IE YH GFK TD P + G+ V L +L P G+
Sbjct: 63 DSGVGIYAPDAESYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKF 122
Query: 447 V 449
+
Sbjct: 123 I 123
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 96 TPQXSRNXXAGYXKLQXIRL*VAC*RSTLPGXXXDXLXNTXSSXGSTLLDCIQSGVENLD 275
+P GY KLQ + + L D L + + G+ LLD IQSGV NLD
Sbjct: 4 SPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANLD 63
Query: 276 SGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXTDXHPXXNXGDVYT--LGNLXPAGECV 449
SGVG+Y PDAE+Y +F L DP+I+ YH GF P + G+ T L +L P G+ +
Sbjct: 64 SGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFI 123
Query: 450 D 452
+
Sbjct: 124 N 124
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 83.0 bits (196), Expect = 5e-16
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 96 TPQXSRNXXAGYXKLQXIRL*VAC*RSTLPGXXXDXLXNTXSSXGSTLLDCIQSGVENLD 275
+P GY KLQ + + L D L + + G+ LLD IQSGV NLD
Sbjct: 41 SPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANLD 100
Query: 276 SGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXTDXHPXXNXGDVYT--LGNLXPAGECV 449
SGVG+Y PDAE+Y +F L DP+I+ YH GF P + G+ T L +L P G+ +
Sbjct: 101 SGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFI 160
Query: 450 D 452
+
Sbjct: 161 N 161
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 72.1 bits (169), Expect = 9e-13
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +3
Query: 198 DXLXNTXSSXGSTLLDCIQSGVENLDSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXT 377
+ L + G+TL DCI+SGV NLD+GVG+Y PDAE+Y +F L D IIE YH GF
Sbjct: 78 EKLKTKRTKLGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPK 136
Query: 378 DXHPXXNXGD 407
P + G+
Sbjct: 137 QKQPPVDLGE 146
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 72.1 bits (169), Expect = 9e-13
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +3
Query: 198 DXLXNTXSSXGSTLLDCIQSGVENLDSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXT 377
+ L + G+TL DCI+SGV NLD+GVG+Y PDAE+Y +F L D IIE YH GF
Sbjct: 106 EKLKTKRTKVGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFSPK 164
Query: 378 DXHPXXNXGD 407
P + G+
Sbjct: 165 QKQPPVDLGE 174
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 59.3 bits (137), Expect = 7e-09
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +3
Query: 198 DXLXNTXSSXGSTLLDCIQSGVENLDSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXT 377
+ L + G+ L DCI+SGV LD+ VG+Y PDAE+Y +F L D IIE YH G
Sbjct: 51 EKLKTKSTKLGANLYDCIRSGVYCLDALVGVYAPDAEAYTLFAPLFDKIIEDYH-GLGPD 109
Query: 378 DXHPXXNXGD 407
P + G+
Sbjct: 110 QKQPPVDLGE 119
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 958 GGXXKKKXPPPXXXKKXGGXPPPPXGP 878
G KKK PPP K G PP P P
Sbjct: 22 GCGGKKKPPPPKSASKMGPPPPAPAPP 48
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 958 GGXXKKKXPPPXXXKKXGGXPPPPXGP 878
G KKK PPP K G PP P P
Sbjct: 22 GCGGKKKPPPPKSASKMGPPPPAPAPP 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,874,416
Number of Sequences: 27780
Number of extensions: 184527
Number of successful extensions: 657
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4058604420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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