Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L15.2
         (1425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   115   9e-28
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   115   9e-28
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.8  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  115 bits (277), Expect = 9e-28
 Identities = 54/84 (64%), Positives = 61/84 (72%)
 Frame = +3

Query: 198 DXLXNTXSSXGSTLLDCIQSGVENLDSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXT 377
           D L    +S  STLLDCIQSG+ENLDSGVGIY PDAE+Y +F  L DPIIE YH GFK T
Sbjct: 20  DQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKT 79

Query: 378 DXHPXXNXGDVYTLGNLXPAGECV 449
           D HP  + GDV +LGNL PA E +
Sbjct: 80  DKHPPKDFGDVDSLGNLDPANEFI 103


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  115 bits (277), Expect = 9e-28
 Identities = 54/84 (64%), Positives = 61/84 (72%)
 Frame = +3

Query: 198 DXLXNTXSSXGSTLLDCIQSGVENLDSGVGIYXPDAESYAVFXXLPDPIIEXYHXGFKXT 377
           D L    +S  STLLDCIQSG+ENLDSGVGIY PDAE+Y +F  L DPIIE YH GFK T
Sbjct: 36  DQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKT 95

Query: 378 DXHPXXNXGDVYTLGNLXPAGECV 449
           D HP  + GDV +LGNL PA E +
Sbjct: 96  DKHPPKDFGDVDSLGNLDPANEFI 119


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 428 EVPERVHVSPVLXRVLVGXLEXXVVXLDDRVGQXXEHGIRLGVRRV-DTDAGVQVLDTRL 252
           E  +R+   PV+ +  V  LE  +  LD    Q    G+R+G   + D D     L+  +
Sbjct: 127 ERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVPGVRIGAHILDDCDNDTYGLEMSV 186

Query: 251 DTVK 240
           D +K
Sbjct: 187 DFIK 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,599
Number of Sequences: 438
Number of extensions: 2922
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 49706082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)