Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L14.2
         (1233 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.29 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    26   0.67 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   6.2  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 0.29
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +1

Query: 214 IKPKYKFVNVYTEFHEFTRKEIKXYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLG 393
           + P + F N+  EF +   +E K          E    ++D+         L   +T +G
Sbjct: 130 LTPAFHF-NILQEFIQIFNEETKRLVEDLEA--ESHKPYIDVVVPITQFTLLSIGETAMG 186

Query: 394 LKAMISEVDEDGDNKISFR-EFLLIYRKAR 480
           +K   S+ D+DG  +  ++   LL YR  R
Sbjct: 187 IKLNASDNDKDGYKRAVYKIGQLLTYRAPR 216


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +1

Query: 214 IKPKYKFVNVYTEFHEFTRKEIKXYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLG 393
           + P + F N+  EF +   +E K          E    ++D+         L   +T +G
Sbjct: 130 LTPAFHF-NILQEFIQIFNEETKRLVEDLEA--ECHKPYIDVVVPITQFTLLSIGETAMG 186

Query: 394 LKAMISEVDEDGDNKISFR-EFLLIYRKAR 480
           +K   S+ D+DG  +  ++   LL YR  R
Sbjct: 187 IKLNASDNDKDGYKRAVYKIGQLLTYRAPR 216


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 756 SVRCYVTNAWDEL 794
           SV CYVT AW  +
Sbjct: 144 SVTCYVTYAWSPI 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,089
Number of Sequences: 336
Number of extensions: 3984
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)