Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L11.2
(1325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.15
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 34 0.26
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.60
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 4.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 4.2
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 30 4.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 5.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 7.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.4
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 9.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 9.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 9.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 9.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 9.7
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/41 (46%), Positives = 19/41 (46%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNR 93
G GGGR G G GGGG G GG G G GR R
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGG----RGGGGRGR 135
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 224 PXXGXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNR 93
P G GGG G G GGG G GG G G G R
Sbjct: 53 PGWGRGGGGSGWGGGRGGG--WGNNGGGGNWGGNGGGGNGGGGR 94
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRR 90
G GGGR GGGG G GG G G G R
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GG G G GGGG G GG G G G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G G G G G GGGG G GG G G G
Sbjct: 86 GGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGG--GGXXGXXXGGXXXGXEXDXGEXGR 99
G GGG G G GG GG G GG G G GR
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGR 128
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 33.9 bits (74), Expect = 0.26
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 230 PXPXXGXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRN 96
P G GGG G G GGGG G G G + G G N
Sbjct: 782 PTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGN 826
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.60
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRRTR 84
G GGGR G GGGG GG G G G RR+R
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRRRSR 278
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -1
Query: 230 PXPXXGXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
P G GGG G G GGG G GG G + D G G
Sbjct: 209 PSQRGGSGGG---GGGGGGGGYGSGGGWGGGGGGRDRDRGGWG 248
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXD 117
G GGGR G G GGG G GG D
Sbjct: 249 GGGGGRGYGGGGGGGGYGYGGGGGGRRRSRSRD 281
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 209 GGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXG 111
GGG G G GGGG G GG G D G
Sbjct: 190 GGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGG 222
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGG G G GGGG G GG G G G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGG 160
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGG G G GGGG G GG G G G
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 230 PXPXXGXGGGRXXXGPGEGGGGXXGXXXGG 141
P G GGG G G GGGG G GG
Sbjct: 116 PACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 230 PXPXXGXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
P P GGG G G GGGG G GG G G G
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGG-GCGGGGGCGGGGGGCGGGG 96
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRR 90
G GGG G G GGG G GG G G GR +R
Sbjct: 157 GGGGGGCGGGGGGCGGGGGGGCGGGGGGGC---GGGCGRKKR 195
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 209 GGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRRTR 84
GGGR G GGGG G GG G + G G +R R
Sbjct: 88 GGGRGGFGGSRGGGGYDG-GRGGSRGGYDGGRGGYGGDRGGR 128
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 GXGGGRXXXGPGEG-GGGXXGXXXGGXXXGXEXDXGEXGRN 96
G GGG G G G GGG G GG G G G N
Sbjct: 30 GGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSN 70
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGG G G GGGG G GG G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGG G G GGGG G GG G G G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 209 GGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRN 96
GGGR G G GG G G GG G G N
Sbjct: 112 GGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGN 149
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 215 GXGGGRXXXGP-GEGGGGXXGXXXGGXXXGXEXDXGEXGRN 96
G GGGR G G+ GGG G G G + G G N
Sbjct: 117 GNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGN 157
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 230 PXPXXGXGGGRXXXGPGEGGGGXXGXXXGG 141
P P G GGG G G GGGG G GG
Sbjct: 455 PIPAGGGGGG--SGGYGAGGGGSGGYGAGG 482
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Frame = -1
Query: 209 GGGRXXXG---PGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRRTRXXXGL 69
GGGR G PG GGG G GG G G G R G+
Sbjct: 138 GGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGERIAEGV 187
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXG---XXXGGXXXGXEXDXGEXGRN 96
G GGGR G G GGGG G GG G + G G N
Sbjct: 80 GNGGGRGDWG-GNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNN 121
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXGRNRR 90
G GG G G GGGG G G D G G R
Sbjct: 124 GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGR 165
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGGR G G GGG G G G G
Sbjct: 55 GRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGG 92
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXG 129
G GGGR G GG G G GG G
Sbjct: 339 GGGGGRADSGGAAGGAGGAGGYSGGGGGG 367
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGGXXXGXEXDXGEXG 102
G GGG G G GGG G GG G G G
Sbjct: 813 GRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGG 850
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGGGXXGXXXGG 141
G GGG G G GGGG G GG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGGGG 120
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGG-GXXGXXXGGXXXGXEXDXG 111
G GGG GP + GG G G GG G D G
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYG 257
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGG-GXXGXXXGGXXXGXEXDXG 111
G GGG GP + GG G G GG G D G
Sbjct: 184 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYG 219
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 215 GXGGGRXXXGPGEGGG-GXXGXXXGGXXXGXEXDXG 111
G GGG GP + GG G G GG G D G
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYG 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,410,884
Number of Sequences: 27780
Number of extensions: 69293
Number of successful extensions: 745
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3715184046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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