Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L08.2
         (1284 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   4.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +1

Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGGXXLPQKXXXG 537
           GGGGGG      S   G G    GG   P+    G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAG 551



 Score = 24.6 bits (51), Expect = 6.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
           GGGG G      S   GGG    GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 477  GXGGXGXXXGXGSPPKKXGXGEXRIKXXAXKKAPKKKK 590
            G GG G   G G+P ++   GE + +        +K+K
Sbjct: 921  GGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRK 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,146
Number of Sequences: 2352
Number of extensions: 3078
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)