Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L08.2
         (1284 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030973-1|AAH30973.1|  392|Homo sapiens UBE4A protein protein.        32   5.2  
BC047898-1|AAH47898.1|  692|Homo sapiens PPP1R12A protein protein.     31   9.1  

>BC030973-1|AAH30973.1|  392|Homo sapiens UBE4A protein protein.
          Length = 392

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +3

Query: 186 SCLXXXXXXXXRTEXXRXEKKKKRXKRXXXLIKKQHEXXKKXKKXEKK 329
           SCL        + +  + +KKKK+ K+     KK+ +  KK KK +KK
Sbjct: 337 SCLLKTPGVVEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 384


>BC047898-1|AAH47898.1|  692|Homo sapiens PPP1R12A protein protein.
          Length = 692

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 219 RTEXXRXEKKKKRXKRXXXLIKKQHEXXKKXKKXEKK 329
           R+   R +KKKK+ K+     KK+ +  KK KK +KK
Sbjct: 656 RSTRTREQKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 692


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,597,311
Number of Sequences: 237096
Number of extensions: 819762
Number of successful extensions: 14504
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12805
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18440487050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)