Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L08.2
(1284 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 33 0.84
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 33 0.84
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 33 0.84
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 33 0.84
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 33 0.84
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 33 0.84
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 33 0.84
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 33 0.84
AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-P... 31 3.4
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 31 4.5
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 31 4.5
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 31 4.5
BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 31 4.5
AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 31 4.5
AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 31 4.5
AY094783-1|AAM11136.1| 118|Drosophila melanogaster LD12750p pro... 30 7.9
AE014298-1712|AAF48112.1| 118|Drosophila melanogaster CG1840-PA... 30 7.9
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 33.1 bits (72), Expect = 0.84
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P P F P P P PP P G S PPPPPP
Sbjct: 493 PLPAFVA-PPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 538
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 33.1 bits (72), Expect = 0.84
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P P F P P P PP P G S PPPPPP
Sbjct: 588 PLPAFVA-PPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAPPPPPP 633
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 33.1 bits (72), Expect = 0.84
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P P F P P P PP P G S PPPPPP
Sbjct: 721 PLPAFVA-PPPPPPPPPPPPPMANYGAPPPPPPPPPGSGSAPPPPPP 766
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P F P P P PP P G S PPPPPP
Sbjct: 483 PLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 529
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P F P P P PP P G S PPPPPP
Sbjct: 493 PLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 539
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P F P P P PP P G S PPPPPP
Sbjct: 483 PLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 529
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P F P P P PP P G S PPPPPP
Sbjct: 641 PLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 687
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
P F P P P PP P G S PPPPPP
Sbjct: 588 PLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPP 634
>AE014296-3444|AAF51657.1| 98|Drosophila melanogaster CG11458-PA
protein.
Length = 98
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +1
Query: 424 AXXGGGGGGXRXXXXSXXXGGGXGXXGGXXLPQKXXXGG 540
A GGGGGG + GGG G GG QK GG
Sbjct: 20 AGGGGGGGGGQGGWQKNGGGGGGGGQGGW---QKGGGGG 55
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 215 GGGGGGGRGGFGGRRGGGGGGGGGG 239
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 177 GGGGGGGRGGFGGRRGGGGGGGGGG 201
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 215 GGGGGGGRGGFGGRRGGGGGGGGGG 239
>BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p
protein.
Length = 399
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 216 GGGGGGGRGGFGGRRGGGGGGGGGG 240
>AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB,
isoform B protein.
Length = 399
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 216 GGGGGGGRGGFGGRRGGGGGGGGGG 240
>AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA,
isoform A protein.
Length = 399
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGG 507
GGGGGG R GGG G GG
Sbjct: 216 GGGGGGGRGGFGGRRGGGGGGGGGG 240
>AY094783-1|AAM11136.1| 118|Drosophila melanogaster LD12750p
protein.
Length = 118
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGGXXLPQK 525
GGGGGG GGG G GG P +
Sbjct: 69 GGGGGGGGGGGGGGGGGGGSGYRGGGLRPNR 99
>AE014298-1712|AAF48112.1| 118|Drosophila melanogaster CG1840-PA
protein.
Length = 118
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGGXXLPQK 525
GGGGGG GGG G GG P +
Sbjct: 69 GGGGGGGGGGGGGGGGGGGSGYRGGGLRPNR 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,904,731
Number of Sequences: 53049
Number of extensions: 269798
Number of successful extensions: 5465
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4445
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6926855700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -