Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L08.2
         (1284 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family ...    29   7.1  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   9.4  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   9.4  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   9.4  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   9.4  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   9.4  

>L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family
           protein 1, isoform b protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 15/36 (41%), Positives = 15/36 (41%)
 Frame = +1

Query: 433 GGGGGGXRXXXXSXXXGGGXGXXGGXXLPQKXXXGG 540
           GGGGGG          GGG G  GG    Q    GG
Sbjct: 59  GGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
           P P  FG  P     P PP P    G           +   PPPPPP
Sbjct: 615 PPPQSFGMAPISSAAPPPPPPPPPMG----LPAVGAGAPPPPPPPPP 657


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 538 PXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
           P P  FG  P     P PP P    G           +   PPPPPP
Sbjct: 441 PPPQSFGMAPISSAAPPPPPPPPPMG----LPAVGAGAPPPPPPPPP 483


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
           SP P    G P P    SPP P                 +   PPPPP
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301



 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPP-----PPP 398
           SP P   GG P P    SPP P    G           +   PPP     PPP
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
           SP P    G P P    SPP P                 +   PPPPP
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322



 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPP-----PPP 398
           SP P   GG P P    SPP P    G           +   PPP     PPP
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPPPPP 398
           SP P    G P P    SPP P                 +   PPPPP
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307



 Score = 28.7 bits (61), Expect = 9.4
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
 Frame = -3

Query: 541 SPXPXFFGGXPXPXXXPSPPXPXWXXGXXXXXXXXXXXSQXXPPP-----PPP 398
           SP P   GG P P    SPP P    G           +   PPP     PPP
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,075,877
Number of Sequences: 27780
Number of extensions: 105810
Number of successful extensions: 1630
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)