SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L07.2
         (1274 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5DDP0 Cluster: SJCHGC09030 protein; n=1; Schistosoma j...    42   0.034
UniRef50_Q229W6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.56 
UniRef50_UPI00006CD034 Cluster: hypothetical protein TTHERM_0019...    38   0.73 
UniRef50_O44741 Cluster: Putative uncharacterized protein; n=1; ...    37   1.3  
UniRef50_UPI00006CAB3F Cluster: hypothetical protein TTHERM_0078...    36   1.7  
UniRef50_Q6DEJ2 Cluster: Zgc:101111; n=2; Danio rerio|Rep: Zgc:1...    36   1.7  
UniRef50_Q98RJ7 Cluster: Putative uncharacterized protein MYPU_0...    36   2.2  
UniRef50_Q8EPB2 Cluster: Septation ring formation regulator ezrA...    36   2.2  
UniRef50_UPI00006D001F Cluster: cyclic nucleotide-binding domain...    35   3.9  
UniRef50_UPI00006CB320 Cluster: Ubiquitin-conjugating enzyme fam...    35   5.2  
UniRef50_Q91SH3 Cluster: GP34; n=1; Guinea pig cytomegalovirus|R...    35   5.2  
UniRef50_A7T342 Cluster: Predicted protein; n=1; Nematostella ve...    35   5.2  
UniRef50_UPI0000F20575 Cluster: PREDICTED: similar to synArfGEF;...    34   6.8  
UniRef50_UPI0000498489 Cluster: hypothetical protein 192.t00004;...    34   6.8  
UniRef50_A3IBX1 Cluster: Transcriptional regulator, AsnC family ...    34   6.8  
UniRef50_A2FVB6 Cluster: Putative uncharacterized protein; n=2; ...    34   6.8  
UniRef50_Q6CD04 Cluster: Similar to ca|CA5054|IPF3704 Candida al...    34   6.8  
UniRef50_Q6BMH2 Cluster: Similar to CA4340|IPF3621 Candida albic...    34   6.8  

>UniRef50_Q5DDP0 Cluster: SJCHGC09030 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09030 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 368

 Score = 41.9 bits (94), Expect = 0.034
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = +2

Query: 506 EIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKIDQ-CIEEAFE 682
           EIDD  + I +     + LR+   + V CS S GE+   +TI  I   K  + C  E+FE
Sbjct: 128 EIDDKCRRIGKAGIELADLRDPTSNHV-CSFSDGEILVSNTITNIHMLKDRKICKYESFE 186

Query: 683 ELSGSFTSVCQNENSQESVTTLVKRFTSLLNSPTVQCGPRRQRQCCS 823
             + S T +  +++  +S+T  V  F + L +  +   P  Q  CCS
Sbjct: 187 --NDSKTDLAFSDSFTDSITFPVSSFQTELYTSRLNSDPIEQSPCCS 231


>UniRef50_Q229W6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1082

 Score = 37.9 bits (84), Expect = 0.56
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
 Frame = +2

Query: 311  KXTTFDSAQLLKKVRRKVAXQLSDKSIIDYNDFIRNLQNN-EANDQQFFFVNGQIISAVS 487
            K  +     L+KK + K+A      ++ID  D ++N     E ND + FF+    I+ + 
Sbjct: 602  KFQSLSQIHLVKK-KLKLARYNVISNLIDGYDSLKNTSTFFENNDDKEFFMLLPKINCLK 660

Query: 488  IEEICREIDDIFKSIDRLASATSTLRNRK-----PDVVQCSISTGELSFDDTIDQIDEEK 652
            + E  ++ D+    + R    T TL N K      D++Q + S    S  ++ D  D+  
Sbjct: 661  LIESYKKTDEYQIDLTRQKLQTETLINVKNIQFADDILQYTDSMSSNSSSESSD--DDSS 718

Query: 653  IDQCIEEAFEEL-SGSFTS--VCQNENSQESVTTLVKRFTSLLN 775
              Q I+E  ++L S S TS   C N+N   S + + +   S+ N
Sbjct: 719  SQQSIDENDQKLCSKSQTSRQSCGNKNELNSCSKVTEENNSIAN 762


>UniRef50_UPI00006CD034 Cluster: hypothetical protein
           TTHERM_00190770; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00190770 - Tetrahymena
           thermophila SB210
          Length = 526

 Score = 37.5 bits (83), Expect = 0.73
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = +2

Query: 608 ELSFDDTIDQIDEEKIDQCIEEAFEELSGSFTSVCQNENSQESVTTLVKRFTSLLNSP 781
           ++  +   D ID +K    I++ F E+SGS  + C N +S+++    +K  + LL+ P
Sbjct: 301 QIGLNKDTDLIDNQKNKPTIDQQFSEISGSALNFCNNNDSKDNNFAHLKAKSQLLSDP 358


>UniRef50_O44741 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 691

 Score = 36.7 bits (81), Expect = 1.3
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
 Frame = +2

Query: 386 SIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRLASATSTLR 565
           S ID  DF  + + N +   +   ++  +     IE+  ++ + +  SID ++SA   L 
Sbjct: 89  STIDKMDFFCS-KGNHSLPMEMSVLSITLPYEACIEKSAKKHETMVFSIDEVSSAVQHLE 147

Query: 566 NRKPDVVQCSISTGELSF--DDTIDQIDEE-KIDQCIEEAFEELSGSFTSVCQNENSQES 736
           N K DV +   STG+L F  +  I ++ EE +++  +E    +LS    S  ++ ++ E+
Sbjct: 148 NEKVDVEKRQSSTGKLIFQTEKEIMKLKEEIQVNTNLESNIIQLSLEKLSSVKDSSTSEN 207

Query: 737 V 739
           V
Sbjct: 208 V 208


>UniRef50_UPI00006CAB3F Cluster: hypothetical protein
           TTHERM_00781020; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00781020 - Tetrahymena
           thermophila SB210
          Length = 690

 Score = 36.3 bits (80), Expect = 1.7
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
 Frame = +2

Query: 380 DKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSI-DRLASATS 556
           D+ I DY  +  +LQN+  ND     ++ Q  + + + ++C+ +D   + I D L     
Sbjct: 71  DEVIKDYYQYYNSLQNSNQNDSISSNIDIQEKNLL-VSQLCKNLDKYHQQIKDYLQLFNL 129

Query: 557 TLRNRKPDVVQCSISTGELSFDDTIDQIDEEKIDQCIEEAFEELSGSFTSVCQNENSQES 736
            L+       + +    EL  +    Q++ +K DQ   +A  ++  SF ++ Q + SQ++
Sbjct: 130 ELKVVSNSQQEWANFCKELKKNQIFHQMNRKKCDQ---KANNQIKSSFQTIPQFKYSQKT 186

Query: 737 VTTLVKRFTSLLNSPT 784
           +    +      NS T
Sbjct: 187 IRQQQQNLNKYSNSAT 202


>UniRef50_Q6DEJ2 Cluster: Zgc:101111; n=2; Danio rerio|Rep:
           Zgc:101111 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 221

 Score = 36.3 bits (80), Expect = 1.7
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 560 LRNRKPDVVQCSISTGELSFDDTIDQIDEEKID-QCIEEAFEELSGSFTSVCQNENSQ 730
           L+N+ P V   +IS+G       +++I+    D +C+E + +EL   FT +    NSQ
Sbjct: 103 LQNKSPAVFTSNISSGSSITGQALNEIESRHKDIRCLEASIQELHNMFTDIAMLVNSQ 160


>UniRef50_Q98RJ7 Cluster: Putative uncharacterized protein
           MYPU_0110; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_0110 - Mycoplasma pulmonis
          Length = 458

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
 Frame = +2

Query: 374 LSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEI------CREIDDIFKSID 535
           L    I+ Y  F +  Q+N A+DQ+    NG+++S ++  EI        EI++    I 
Sbjct: 305 LQSTGILKYT-FSKENQDN-ASDQEPNSKNGKLVSNINSLEITGFKLPANEIEEELLKIS 362

Query: 536 RLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKID 658
           ++ +  STL+++KP  +  SI      F    ++  E KID
Sbjct: 363 KVVAINSTLKSKKPSQITQSILDIFSDFQPIDEEGQEYKID 403


>UniRef50_Q8EPB2 Cluster: Septation ring formation regulator ezrA;
           n=1; Oceanobacillus iheyensis|Rep: Septation ring
           formation regulator ezrA - Oceanobacillus iheyensis
          Length = 564

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = +2

Query: 380 DKSIIDYNDFIRNLQNNEANDQQFFFVNGQIIS-AVSIEEICREIDDIFKSIDRLASATS 556
           DK II Y D ++NLQ      QQ     G I   +  ++EI   I ++++S++  A A +
Sbjct: 253 DKEIITYQDQLKNLQ------QQ--IEQGDITDVSTKLDEIEERITEMYESLEGEAIAKN 304

Query: 557 TLRNRKPDVVQCSISTGELSFDDTIDQIDE 646
            L  R P+  + SIS    ++DDT  +++E
Sbjct: 305 YLEQRIPE-YEKSISEIAATYDDTKLEVEE 333


>UniRef50_UPI00006D001F Cluster: cyclic nucleotide-binding domain
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: cyclic nucleotide-binding domain containing
           protein - Tetrahymena thermophila SB210
          Length = 705

 Score = 35.1 bits (77), Expect = 3.9
 Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
 Frame = +2

Query: 350 VRRKVAXQLSDKSIIDYNDFIRNL--QNNEANDQQFFFVNGQIISAVSIEEICREIDDIF 523
           + +K+  QL +K   +YN + + L  Q+NE N+Q +  +N Q  S++S EE   + +   
Sbjct: 314 INKKICEQL-EKDCKNYNSYTQLLYQQDNEKNNQSYETINQQDKSSLS-EENTEQSNQ-- 369

Query: 524 KSIDRLASATSTLRNRKPDV--VQCSISTGELSFDDTI-DQIDEE-KIDQ------CIEE 673
            S+++     +TL N K     +    +T  LS    + +Q++E+ K DQ       ++E
Sbjct: 370 SSVEKQFQYRNTLSNIKISQFHINDQNNTSNLSSVTAVNEQLNEDNKKDQNQINLLMLQE 429

Query: 674 AFEELS-GSFTSVCQNENSQESVTTLVKRFTSLLNSPTVQCGPRRQRQCCSRFQEL 838
                +     ++C ++ +QE ++   K +  L+ S   +    + R     +Q +
Sbjct: 430 NLNNKNQQQIQAICNDQINQEIISNFSKSYNILIESDQTRTNLNKARLSSKTYQSI 485


>UniRef50_UPI00006CB320 Cluster: Ubiquitin-conjugating enzyme family
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Ubiquitin-conjugating enzyme family protein -
           Tetrahymena thermophila SB210
          Length = 309

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 27/138 (19%), Positives = 67/138 (48%)
 Frame = +2

Query: 326 DSAQLLKKVRRKVAXQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICR 505
           D+ Q L+ ++R  +   +D      +   +    N +NDQQ  F+N   I+ ++ +E+  
Sbjct: 174 DAKQSLENLQRSQSQSQNDTMSSSTSSQTKLTSTNTSNDQQTKFINN--INTINHKELSF 231

Query: 506 EIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKIDQCIEEAFEE 685
           + ++   S++++ +      + + +  Q ++  GE +  + I++ +EE     +++  E 
Sbjct: 232 QKNN---SLNQVQNVKQKYYDEEEEEKQNNVYKGEAADKEQIEEEEEELYCGSVQQLSEI 288

Query: 686 LSGSFTSVCQNENSQESV 739
              S + + Q+E  +E V
Sbjct: 289 SQTSCSELSQSEIDKECV 306


>UniRef50_Q91SH3 Cluster: GP34; n=1; Guinea pig cytomegalovirus|Rep:
           GP34 - Guinea pig cytomegalovirus
          Length = 527

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
 Frame = +2

Query: 485 SIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQID-EEKIDQ 661
           +++ + R +   +KSI R       L +  PD +    +T    F   +D  D E  + Q
Sbjct: 23  NVDALVRAVSQEYKSIRRAECRKRLLDHHLPDFITSKTATSTFIFCTKVDWQDAEHGLIQ 82

Query: 662 CIEEAFEELSGSFTSVCQNENSQESVTTLVKRFTSLLNSPTVQCGPRRQRQCCSRFQELA 841
                ++  S   +++   E   + +   +++  S LN P  Q      R  C  F  LA
Sbjct: 83  LKRTGYDPDSDGTSAI---EQMMQQIRCRIRKNQSKLNDPAKQRMILTIRAFCVTFNRLA 139

Query: 842 DFWNNRAFH 868
                R +H
Sbjct: 140 FLARTRHYH 148


>UniRef50_A7T342 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1205

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
 Frame = +2

Query: 488  IEEICRE----IDDIFKSIDRLASATSTLRNRKPDVVQCSIST-GELSFDDTIDQIDEEK 652
            +EE+C E    + +I ++I RL   ++  RNR    ++  ++T  EL   +T +  D+E+
Sbjct: 964  LEELCEEKVNALSEIKQNIRRLKEKSTATRNR---TLKKQLTTLNELL--NTSNFSDDEE 1018

Query: 653  IDQCIEEAFEELSGSFTSVCQ 715
            +D  +E A +  SG +T  CQ
Sbjct: 1019 LDNILEVAMQASSGLYTVTCQ 1039


>UniRef50_UPI0000F20575 Cluster: PREDICTED: similar to synArfGEF;
           n=3; Danio rerio|Rep: PREDICTED: similar to synArfGEF -
           Danio rerio
          Length = 1051

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 680 EELSGSFTSVCQNE--NSQESVTTLVKRFTSLLNSPTVQCGPRRQRQCCSRFQELAD 844
           E L+G +  + Q E  ++++ VT + +   S+L   T+   P R+  CCSR  E+ D
Sbjct: 703 EMLAGIYERIQQRELRSNEDHVTYVTRVEQSILGMKTILSVPHRRLVCCSRLYEVTD 759


>UniRef50_UPI0000498489 Cluster: hypothetical protein 192.t00004;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 192.t00004 - Entamoeba histolytica HM-1:IMSS
          Length = 685

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +2

Query: 290 MLSALDLKXTTFDSAQLLKKVRRKVAXQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQ 469
           M+  L  K   ++ ++LLKKV + +   +   + ID+ + + +  N     QQ F +   
Sbjct: 63  MVITLSSKQNQYEKSELLKKVLKIIYAYIKSINKIDFTNGVLSFNNKPLFPQQVFSMFSI 122

Query: 470 IISAV--SIEEICREIDDIFKSIDRLASATS 556
           IIS    SI  I R  + +F  I+ +   T+
Sbjct: 123 IISTEIGSISIIPRNSEIVFNIIEHITLHTT 153


>UniRef50_A3IBX1 Cluster: Transcriptional regulator, AsnC family
           protein; n=4; Bacillaceae|Rep: Transcriptional
           regulator, AsnC family protein - Bacillus sp. B14905
          Length = 149

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +2

Query: 482 VSIEEICREIDDI--FKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKI 655
           V+I+++ R I  I  FKSID    + S   N  PDV++C    GE+S+   +     E +
Sbjct: 55  VNIKKMERTIQAIILFKSID--CKSLSAFCNSHPDVLECYRVAGEISYIVKLATYSVETL 112

Query: 656 DQCIEEAFEELSGSFTSVCQNENSQESVT 742
           +Q I+      + S T++  + N ++ +T
Sbjct: 113 EQFIDATMPYGTPS-TNIVLSSNEKKVIT 140


>UniRef50_A2FVB6 Cluster: Putative uncharacterized protein; n=2;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1684

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
 Frame = +2

Query: 380  DKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSI------EEICREIDDIFKSIDRL 541
            DK I + N+ +  LQN   N          IIS++        EEI    DD  K I+ L
Sbjct: 698  DKEISELNEKLEKLQNQVNNLSSEKVTKDDIISSLQSEVNDLQEEIESRKDDKQKEINSL 757

Query: 542  ASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKIDQCIEEAFEELSGSFTSVCQNE 721
                 TL N K   +Q S++      ++ I  +  EK    +E   E+LS     + + E
Sbjct: 758  KEKIETLENEKIS-LQDSMNEEIHKLEEEISNLQNEK--SVLETENEKLSKQIEELQEKE 814

Query: 722  -NSQESVTTLVKR 757
             +SQE    L K+
Sbjct: 815  KSSQEENEELSKQ 827


>UniRef50_Q6CD04 Cluster: Similar to ca|CA5054|IPF3704 Candida
           albicans unknown function; n=1; Yarrowia lipolytica|Rep:
           Similar to ca|CA5054|IPF3704 Candida albicans unknown
           function - Yarrowia lipolytica (Candida lipolytica)
          Length = 626

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
 Frame = +2

Query: 341 LKKVRRKVAXQLSDKSIIDYNDFIRN--LQNNEANDQQFFFVNGQIISAVSIEEICREID 514
           LKK+  K   ++ ++S++ YND   +  +   E  D      +G + SA++I E+   + 
Sbjct: 269 LKKLSMKDIKEVVERSLVKYNDTAEHEVILPTEVIDYIAGIADGDVRSALNILELVVSVC 328

Query: 515 DIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEKIDQCIEEAFEELSG 694
           DI +           +   KP+  +   +T   + +DT D  +E   D     +  E + 
Sbjct: 329 DIVEE-----QPEKAVEEEKPEETK-DTTTEACAANDTTDATNEATPDDSAILSDSEAAE 382

Query: 695 SFTSVCQNENSQESVT 742
           +  S  Q+ +SQ +VT
Sbjct: 383 NPASSSQDASSQLTVT 398


>UniRef50_Q6BMH2 Cluster: Similar to CA4340|IPF3621 Candida albicans
           IPF3621; n=1; Debaryomyces hansenii|Rep: Similar to
           CA4340|IPF3621 Candida albicans IPF3621 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 831

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
 Frame = +2

Query: 392 IDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRLASATSTLRNR 571
           IDY +F++ L NN  + QQ +  + +    +    +  +ID +  S+D L  + S   N 
Sbjct: 457 IDYEEFVK-LSNNHHSLQQQYLSSQENWKLIE-SNLLNKIDVLTSSVDSLKKSKSKSMN- 513

Query: 572 KPDVVQCSISTGELSFDDTIDQIDE-----EKI---DQCIEEAFEELSGSFTSVCQNENS 727
           +   +Q S+      +D  I++ DE     E+I   +Q  +  ++EL   F    Q  N+
Sbjct: 514 EIQKLQNSLQRKMEEYDQLIEKFDELTNEKEEIVFQNQVKDTDYQELQEKFDKFQQIYNT 573

Query: 728 -QESVTTLVKRFTSLL----NSPTVQCGPRRQ 808
            ++++ + +K+ T  L    N+     GP  Q
Sbjct: 574 DRQNLNSKIKQLTESLEKSKNNSNTSLGPFEQ 605


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,763,594
Number of Sequences: 1657284
Number of extensions: 13264160
Number of successful extensions: 40644
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 38961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40615
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129984699639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -