Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L07.2
         (1274 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1013 + 23554996-23555139,23555456-23555541,23556375-235563...    32   0.84 
02_03_0200 - 16282220-16282255,16283662-16284126,16284491-16284595     31   1.5  
05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89...    29   5.9  
05_03_0276 - 11485123-11485136,11486549-11487557                       29   7.8  

>08_02_1013 +
           23554996-23555139,23555456-23555541,23556375-23556399,
           23556655-23556711,23556795-23556852,23557767-23558614,
           23558862-23558921
          Length = 425

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 90  CLFKXXVSHGRVRHAVNVSTXAWVQXSSPWXPSCSVTRNGCNSKQP 227
           C     +S   +RH+  +    WV+ +  W P+  V  N C S +P
Sbjct: 15  CQSSPALSEDNLRHSFRLGDITWVKHTGSWWPA-QVVENSCISSKP 59


>02_03_0200 - 16282220-16282255,16283662-16284126,16284491-16284595
          Length = 201

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +2

Query: 605 GELSFDDTIDQIDEEKIDQCIEEAFEELSGSFTSVCQNENSQESVTTLVKRFTSLLNSPT 784
           GE   +DT+D+++EE+  Q I    E  SG        E +QE    L+  F+ L  +  
Sbjct: 21  GEAGVEDTVDRVEEERDVQRILAISEIYSGDACMTITGEMNQE----LIYNFSGLYATAQ 76

Query: 785 VQCGPRRQRQ 814
            +   RR+R+
Sbjct: 77  RKAPARRRRR 86


>05_01_0133 +
           895107-895280,895960-896271,896815-897081,897161-897265
          Length = 285

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 341 LKKVRRKVAXQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDI 520
           +KK  R     LSD   +D     R  Q   A+D     +NG+I+S    + +  EI++ 
Sbjct: 69  IKKRGRASLVDLSDILGVDLYHVERQSQKVVADDPSLMLINGEIMSQSYWDTVTEEINEK 128

Query: 521 FKSIDRLASA 550
            +   ++A A
Sbjct: 129 LQERSQIALA 138


>05_03_0276 - 11485123-11485136,11486549-11487557
          Length = 340

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 17/72 (23%), Positives = 32/72 (44%)
 Frame = +2

Query: 596 ISTGELSFDDTIDQIDEEKIDQCIEEAFEELSGSFTSVCQNENSQESVTTLVKRFTSLLN 775
           + T E   +  +  + +E   Q + E +E+         Q E+    +T   +R   ++N
Sbjct: 200 VETDEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNCKRR---IVN 256

Query: 776 SPTVQCGPRRQR 811
            P + CG +RQR
Sbjct: 257 IPVIPCGNQRQR 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,431,605
Number of Sequences: 37544
Number of extensions: 350318
Number of successful extensions: 880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)