Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L06.2
         (1271 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0386 + 5100249-5100562,5100877-5100927,5101201-5101204           31   1.9  
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502...    30   4.5  

>04_01_0386 + 5100249-5100562,5100877-5100927,5101201-5101204
          Length = 122

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +2

Query: 467 GSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLY 646
           GS D R       + A++   D +    ++ P +TP H +     +   +   R A HL 
Sbjct: 38  GSIDVRAGGAGDGSAASEYCHDAVAAAAEVIPLLTPLHAVPAAPAASDQVSGGRTARHLT 97

Query: 647 SIIDGKPKEVL 679
            ++ G  +E+L
Sbjct: 98  EVVAGGGREIL 108


>11_06_0197 +
           21149453-21149630,21149930-21149996,21150142-21150244,
           21150901-21150971,21151091-21151154,21151239-21151304,
           21151416-21151463,21151544-21151606,21151680-21151736,
           21151884-21151950,21151969-21152042,21152176-21152244,
           21152323-21152414,21152782-21152860,21153233-21153398,
           21153826-21153950,21154089-21154351,21154473-21154569,
           21154659-21154820,21154904-21155008,21155935-21156180
          Length = 753

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 590 EEGQSGFHLQITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTV 721
           E  Q+     +    EH  SI++ K +E  G   +R+KE  STV
Sbjct: 512 ELDQTTIRKMVMELREHARSIVEEKAREEAGNVLMRMKERFSTV 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,697,833
Number of Sequences: 37544
Number of extensions: 275455
Number of successful extensions: 529
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)