Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L04.2
         (2082 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6PV85 Cluster: Chromosome segregation ATPases-like pro...    35   9.4  

>UniRef50_A6PV85 Cluster: Chromosome segregation ATPases-like protein;
            n=2; Victivallis vadensis ATCC BAA-548|Rep: Chromosome
            segregation ATPases-like protein - Victivallis vadensis
            ATCC BAA-548
          Length = 720

 Score = 34.7 bits (76), Expect = 9.4
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = +1

Query: 1525 KKXXXKKXKIKKKEKXXLXXKXEKXNKXG*NKXKKAXLXXXEXNXKXXXEXKKN*KKMGX 1704
            KK   KK K KKK+K     K +   K    K KKA     +   K   + KK  KK   
Sbjct: 173  KKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKANNQKKKQKKKRKKQKKKKKKKQKK 232

Query: 1705 RXXXEXXXXXKXEXXXKXKKXXXKWNQNXXLKXK 1806
            +   +     K     K KK   K  +    K K
Sbjct: 233  KKKKKKNKKKKKNKKKKKKKKNKKKKKKKKKKKK 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,271,563
Number of Sequences: 1657284
Number of extensions: 5277409
Number of successful extensions: 5011
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4994
length of database: 575,637,011
effective HSP length: 106
effective length of database: 399,964,907
effective search space used: 234779400409
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)