Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L02.2
(1223 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p pro... 243 3e-64
BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p pro... 243 3e-64
AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p pro... 243 3e-64
AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB... 243 3e-64
AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA... 243 3e-64
BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p pro... 40 0.009
AY070580-1|AAL48051.1| 228|Drosophila melanogaster RE63575p pro... 30 7.4
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 30 7.4
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 30 7.4
AE013599-903|AAF58913.2| 228|Drosophila melanogaster CG30000-PA... 30 7.4
>BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p
protein.
Length = 190
Score = 243 bits (595), Expect = 3e-64
Identities = 112/164 (68%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 ISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPG 255
+S+ S A +KVGD LP+ DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPG
Sbjct: 27 LSKTSAAMVKVGDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPG 86
Query: 256 YVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTN 432
YV +AD+LKS GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +
Sbjct: 87 YVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTID 146
Query: 433 LPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 564
LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 147 LPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p
protein.
Length = 190
Score = 243 bits (595), Expect = 3e-64
Identities = 112/164 (68%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 ISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPG 255
+S+ S A +KVGD LP+ DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPG
Sbjct: 27 LSKTSAAMVKVGDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPG 86
Query: 256 YVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTN 432
YV +AD+LKS GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +
Sbjct: 87 YVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTID 146
Query: 433 LPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 564
LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 147 LPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p
protein.
Length = 190
Score = 243 bits (595), Expect = 3e-64
Identities = 112/164 (68%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 ISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPG 255
+S+ S A +KVGD LP+ DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPG
Sbjct: 27 LSKTSAAMVKVGDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPG 86
Query: 256 YVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTN 432
YV +AD+LKS GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +
Sbjct: 87 YVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTID 146
Query: 433 LPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 564
LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 147 LPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB,
isoform B protein.
Length = 190
Score = 243 bits (595), Expect = 3e-64
Identities = 112/164 (68%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 ISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPG 255
+S+ S A +KVGD LP+ DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPG
Sbjct: 27 LSKTSAAMVKVGDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPG 86
Query: 256 YVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTN 432
YV +AD+LKS GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +
Sbjct: 87 YVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTID 146
Query: 433 LPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 564
LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 147 LPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA,
isoform A protein.
Length = 190
Score = 243 bits (595), Expect = 3e-64
Identities = 112/164 (68%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 ISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPG 255
+S+ S A +KVGD LP+ DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPG
Sbjct: 27 LSKTSAAMVKVGDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPG 86
Query: 256 YVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTN 432
YV +AD+LKS GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +
Sbjct: 87 YVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTID 146
Query: 433 LPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 564
LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 147 LPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p
protein.
Length = 133
Score = 39.5 bits (88), Expect = 0.009
Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -1
Query: 356 C*APQAAITYGSLTDTHTISATPS-DFSLSAFCT 258
C PQA IT GSLT+T TIS+TP DFS SA T
Sbjct: 100 CSLPQADITKGSLTETQTISSTPCLDFSSSAELT 133
>AY070580-1|AAL48051.1| 228|Drosophila melanogaster RE63575p
protein.
Length = 228
Score = 29.9 bits (64), Expect = 7.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 106 VGDQLPAADLFEDSPANKVNICELTAGKK 192
VGD+L AD+F S N++ +C+ +K
Sbjct: 161 VGDKLTVADIFGSSEINQMKLCQYNVNEK 189
>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch
depedent uracil/thymineDNA glycosylase protein.
Length = 1738
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 462 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 304
FGA SE Q + Q Q L + + H HL S +S ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498
>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
protein.
Length = 1738
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 462 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 304
FGA SE Q + Q Q L + + H HL S +S ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498
>AE013599-903|AAF58913.2| 228|Drosophila melanogaster CG30000-PA
protein.
Length = 228
Score = 29.9 bits (64), Expect = 7.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 106 VGDQLPAADLFEDSPANKVNICELTAGKK 192
VGD+L AD+F S N++ +C+ +K
Sbjct: 161 VGDKLTVADIFGSSEINQMKLCQYNVNEK 189
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,117,728
Number of Sequences: 53049
Number of extensions: 1001392
Number of successful extensions: 2318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2313
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6519393600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -