Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_L01.2
(1247 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 251 3e-66
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 250 1e-65
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 250 1e-65
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 249 1e-65
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 238 3e-62
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 237 8e-62
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 237 8e-62
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 145 3e-34
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 145 3e-34
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 145 3e-34
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 145 3e-34
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 145 3e-34
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 144 6e-34
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 144 6e-34
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 72 5e-12
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 72 5e-12
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 72 5e-12
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 72 5e-12
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 45 5e-04
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 31 8.7
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 251 bits (615), Expect = 3e-66
Identities = 119/197 (60%), Positives = 138/197 (70%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y +VDIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 250 bits (611), Expect = 1e-65
Identities = 118/197 (59%), Positives = 137/197 (69%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 250 bits (611), Expect = 1e-65
Identities = 118/197 (59%), Positives = 137/197 (69%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 249 bits (610), Expect = 1e-65
Identities = 118/197 (59%), Positives = 136/197 (69%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM+
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKH 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 238 bits (582), Expect = 3e-62
Identities = 118/207 (57%), Positives = 137/207 (66%), Gaps = 10/207 (4%)
Frame = +2
Query: 317 RYAQLIVGPAGSGK----------STYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLV 466
RYAQL++GPAGSGK STYC+T+V+H R V VVNLDPAAEHF+Y +
Sbjct: 23 RYAQLVMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMA 82
Query: 467 DIRELIHLDDAMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIE 646
DIRELI +DD MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIE
Sbjct: 83 DIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIE 142
Query: 647 LYTHLPVMRRLVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXX 826
LYTHLPVM++LV L W F +C VFLVDSQFM++ KF+S + LS M
Sbjct: 143 LYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNI 202
Query: 827 XXKMDLXXKXXXKXIXNXLXPDPXVLL 907
KMDL K K I L PD LL
Sbjct: 203 MTKMDLLSKKAKKEIEKFLDPDMYSLL 229
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 237 bits (579), Expect = 8e-62
Identities = 112/197 (56%), Positives = 133/197 (67%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYA ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 237 bits (579), Expect = 8e-62
Identities = 112/197 (56%), Positives = 133/197 (67%)
Frame = +2
Query: 317 RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 496
RYA ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 497 AMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 676
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 677 LVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXKX 856
LV L W F +C VFLVDSQFM++ KF+S + LS M KMDL K
Sbjct: 123 LVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKK 182
Query: 857 XXKXIXNXLXPDPXVLL 907
K I L PD LL
Sbjct: 183 AKKEIEKFLDPDMYSLL 199
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 145 bits (352), Expect = 3e-34
Identities = 74/175 (42%), Positives = 98/175 (56%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 145 bits (352), Expect = 3e-34
Identities = 74/175 (42%), Positives = 98/175 (56%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 145 bits (352), Expect = 3e-34
Identities = 74/175 (42%), Positives = 98/175 (56%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 145 bits (352), Expect = 3e-34
Identities = 74/175 (42%), Positives = 98/175 (56%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 145 bits (352), Expect = 3e-34
Identities = 74/175 (42%), Positives = 98/175 (56%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 144 bits (349), Expect = 6e-34
Identities = 74/175 (42%), Positives = 97/175 (55%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 144 bits (349), Expect = 6e-34
Identities = 74/175 (42%), Positives = 97/175 (55%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
+ Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D
Sbjct: 10 FGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDV 69
Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R +
Sbjct: 70 MD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSI 127
Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 128 FSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 182
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 71.7 bits (168), Expect = 5e-12
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Frame = +2
Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 682
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
+ L + +F V++++D+ + F+S + S++
Sbjct: 141 EALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSIL 177
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 71.7 bits (168), Expect = 5e-12
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Frame = +2
Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 7 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 66
Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 682
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 67 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 124
Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
+ L + +F V++++D+ + F+S + S++
Sbjct: 125 EALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSIL 161
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 71.7 bits (168), Expect = 5e-12
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Frame = +2
Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 682
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
+ L + +F V++++D+ + F+S + S++
Sbjct: 141 EALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSIL 177
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 71.7 bits (168), Expect = 5e-12
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Frame = +2
Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 682
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
+ L + +F V++++D+ + F+S + S++
Sbjct: 141 EALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSIL 177
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 45.2 bits (102), Expect = 5e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYE 457
+ Q ++GP GSGK+TYC + + R V VVNLDPA E Y+
Sbjct: 10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYD 55
Score = 33.5 bits (73), Expect = 1.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 689 LXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
+ W+ + V LVDS + D AKF+S L+ M KMDL
Sbjct: 60 MAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDL 111
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 31.1 bits (67), Expect = 8.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 593 VAPLTSQNSLRGSQYKTLDHHLVQISIPHLP*HHQGVLIL*CLRVAHSQSVQLLDPSLLH 414
+ P+ L LDHHLVQ+ H P H GV + + +++ P L
Sbjct: 796 LGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKSFINSIRRAINKYPPINLK 855
Query: 413 LQC 405
++C
Sbjct: 856 IKC 858
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,541,908
Number of Sequences: 237096
Number of extensions: 1982243
Number of successful extensions: 4666
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4650
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17779932290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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