Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_L01.2
         (1247 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-15|CAA22102.1|  272|Caenorhabditis elegans Hypothetical...   218   6e-57
U97196-2|AAB52461.2|  268|Caenorhabditis elegans Hypothetical pr...   119   5e-27
U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon g...    74   2e-13
AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.      74   2e-13
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z81064-3|CAB02961.2|  268|Caenorhabditis elegans Hypothetical pr...    29   9.1  
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr...    29   9.1  

>AL033514-15|CAA22102.1|  272|Caenorhabditis elegans Hypothetical
           protein Y75B8A.14 protein.
          Length = 272

 Score =  218 bits (533), Expect = 6e-57
 Identities = 96/193 (49%), Positives = 133/193 (68%)
 Frame = +2

Query: 314 MRYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLD 493
           M+YAQL++GPAGSGKSTYCS +  H L + R + +VNLDPA E F+Y  +VD+R+LI ++
Sbjct: 1   MKYAQLVMGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVN 60

Query: 494 DAMEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMR 673
           D  EDEEL  GPNG LVFC+E L++N +WL ++L + +DDY + DCPGQIELY+HLPVMR
Sbjct: 61  DVQEDEELILGPNGALVFCMEYLVQNLEWLHDELDEGEDDYFVIDCPGQIELYSHLPVMR 120

Query: 674 RLVDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDLXXK 853
           ++VD L +W+F +C VFL+D+ F++D  KF+S  +  LS M            KMDL  +
Sbjct: 121 QIVDALKSWDFNVCSVFLIDTNFVLDAEKFISGALTALSAMVAIETPAINVLTKMDLLSE 180

Query: 854 XXXKXIXNXLXPD 892
              + +   L  D
Sbjct: 181 RNKQLVDEFLETD 193


>U97196-2|AAB52461.2|  268|Caenorhabditis elegans Hypothetical
           protein B0207.6 protein.
          Length = 268

 Score =  119 bits (286), Expect = 5e-27
 Identities = 61/175 (34%), Positives = 94/175 (53%)
 Frame = +2

Query: 320 YAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDA 499
           Y  L++G  G+GKST+C+ +      +KR    +NLDPA +   Y P V+I E+I ++D 
Sbjct: 2   YGVLVIGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDV 61

Query: 500 MEDEELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
           M+   L  GPNG L +CIETL  N +WL +++      Y++ DCPGQ+ELY     + ++
Sbjct: 62  MD--RLGLGPNGALKYCIETLGANCNWLLQKIEANHKKYLIIDCPGQLELYKSEGELWKV 119

Query: 680 VDLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVMXXXXXXXXXXXXKMDL 844
           +  L      +C + L DS +  D +KF+S  +  L+ M            K DL
Sbjct: 120 IRFLEKSGVRLCALHLADSLYCSDPSKFISVALSTLATMVTMEMPQVNCLSKADL 174


>U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon gene
           protein 2 protein.
          Length = 355

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
 Frame = +2

Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
           L++G AGSGK+T+   +       K    V+NLDPA     Y   VDIR+ +   + M  
Sbjct: 34  LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVM-- 91

Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDY--ILFDCPGQIELYTHLPVMRRLV 682
           +E   GPNG ++ C+  +    D + E +     D+   L D PGQIE +T       + 
Sbjct: 92  KEFGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIIT 151

Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
           D L + +    V+++VDS    +   F+S  +   S++
Sbjct: 152 DSLAS-SHPTVVMYIVDSARATNPTTFMSNMLYACSIL 188


>AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.
          Length = 355

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
 Frame = +2

Query: 329 LIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 508
           L++G AGSGK+T+   +       K    V+NLDPA     Y   VDIR+ +   + M  
Sbjct: 34  LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVM-- 91

Query: 509 EELKFGPNGGLVFCIETLLENSDWLEEQLGDVDDDY--ILFDCPGQIELYTHLPVMRRLV 682
           +E   GPNG ++ C+  +    D + E +     D+   L D PGQIE +T       + 
Sbjct: 92  KEFGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIIT 151

Query: 683 DLLXNWNFXICVVFLVDSQFMIDGAKFLSXTMXXLSVM 796
           D L + +    V+++VDS    +   F+S  +   S++
Sbjct: 152 DSLAS-SHPTVVMYIVDSARATNPTTFMSNMLYACSIL 188


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 317  RYAQLIVGPAGSGKSTYCSTIVKHXLDSKRIVDVVNLDPAA 439
            R   ++VG AGSGKST    + +  + +K+ + V   +P A
Sbjct: 1914 RIGVVVVGAAGSGKSTIWKILQRSLILTKKPLKVTQFNPKA 1954


>Z81064-3|CAB02961.2|  268|Caenorhabditis elegans Hypothetical
           protein F16B12.4 protein.
          Length = 268

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 554 ETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRL 679
           E L E  D++EE+  + DDD  +    G+   +TH  + R L
Sbjct: 59  ENLAEIPDFIEEKCDEFDDDEYILQPTGEDSKFTHNDMNRVL 100


>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
            C05A9.1 protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 332  IVGPAGSGKSTYCSTIVK--HXLDSKRIVDVVNL 427
            +VGP+GSGKST  S + +  H +D +  +D  N+
Sbjct: 1069 LVGPSGSGKSTIISLLERFYHAVDGEVKIDEENV 1102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,756
Number of Sequences: 27780
Number of extensions: 323855
Number of successful extensions: 863
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)