Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K23.2
(1276 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0082 - 40965947-40967023 36 0.090
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 34 0.28
03_05_0067 - 20460206-20460703,20461255-20461530 32 0.84
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.84
07_03_0600 + 19866757-19867218,19867920-19868429 31 1.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 2.6
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 4.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 4.5
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 30 4.5
06_01_1013 - 7931756-7935109 30 4.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 4.5
09_02_0603 - 11150739-11150746,11150791-11151340 29 5.9
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 29 5.9
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 7.8
08_01_0059 - 394001-394708 29 7.8
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 29 7.8
01_05_0433 - 22094784-22095659 29 7.8
>01_07_0082 - 40965947-40967023
Length = 358
Score = 35.5 bits (78), Expect = 0.090
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = -1
Query: 1219 PXXAXPXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGG 1040
P A P GP P+ PPP G PPP Q + + PPP GGG
Sbjct: 236 PVTAYPAAAGPSTAAPYGTAPPPQY------GYGYPAQPPPPQAGYGYPPPPPQAGYGGG 289
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.9 bits (74), Expect = 0.28
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Frame = -1
Query: 1231 HFWXPXXAXPXXXGPXXXXPFFXFPP--PXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPP 1058
H P A P P P PP P P G + PPP Q ++ PPPP
Sbjct: 40 HMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGP-GPPQQQQPPPPPQMYYQPPPPPPP 98
Query: 1057 XFXGGGXPPXXXKXXXXPP 1001
PP PP
Sbjct: 99 YGVNSSQPPPPPPPPPSPP 117
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 32.3 bits (70), Expect = 0.84
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 1105 PPPXQXFFFFXXPPPPXFXGGGXPPXXXKXXXXPP 1001
PPP Q F PPPP + G PP PP
Sbjct: 15 PPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPPP 49
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.84
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = -1
Query: 1219 PXXAXPXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGG 1040
P P P P PPP +G P PPP PPPP GG
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP---------PPPPGGKKGG 376
Query: 1039 XPPXXXKXXXXPP 1001
PP K P
Sbjct: 377 PPPPPPKGGASRP 389
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXP 1034
PPP G P G + PP Q + P PP + G P
Sbjct: 18 PPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +1
Query: 1003 GGXPXFXXKXG-GXPPPXXXXXXXXXXXXXXXXXXAPLXXPGXPGGPPXKXGG 1158
GG P G PPP AP PG PGGPP GG
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
>12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 1070 PPPPXFXGGGXPPXXXKKXGXPPP 999
PPPP G PP K G PPP
Sbjct: 615 PPPPRPPGAPPPPPPPGKPGGPPP 638
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 1070 PPPPXFXGGGXPPXXXKKXGXPPP 999
PPPP G PP K G PPP
Sbjct: 920 PPPPRPPGAPPPPPPPGKPGGPPP 943
>08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -1
Query: 1105 PPPXQXFFFFXXPPPPXFXGGGXPPXXXKXXXXPPXXFFFFXXXPQ 968
PPP Q + PPPP G PP PP ++ PQ
Sbjct: 38 PPPPQ-MWGQAPPPPPQMWGQAPPPPQPAYGQPPPAQAGYYGAPPQ 82
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 551 GGGXXXGPPPXXPXGKKPPPP 613
GGG GPP P PPPP
Sbjct: 80 GGGQRRGPPQERPSAAPPPPP 100
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 642 PPXXXKKXXXGGGGFXPXGFXGGGPXXXPPPXKK 541
PP GGGG P GG PPP KK
Sbjct: 370 PPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKK 403
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = -1
Query: 1174 PFFXFPPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPP----PPXFXGGGXPP 1031
P F FPPP G PPP FF PP PP G PP
Sbjct: 39 PPFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPPQLGVPP 90
>04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 29.5 bits (63), Expect = 5.9
Identities = 23/88 (26%), Positives = 26/88 (29%), Gaps = 4/88 (4%)
Frame = -1
Query: 1252 PPISLXXHFWXPXXAXPXXXGPXXXXPFFXFPPP---XXRGXPXGXXGXXRXP-PPXQXF 1085
PP ++ + P P GP PF PP P P PP Q
Sbjct: 64 PPAAIAGYRGPPPPQRPFGAGPPQQGPFAAAAPPPQGPFTSAPSSQGPFAAAPQPPSQGP 123
Query: 1084 FFFXXPPPPXFXGGGXPPXXXKXXXXPP 1001
F PP G PP PP
Sbjct: 124 FGTAPPPSQGPFGTAPPPSQGPFGTAPP 151
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 612 GGGGFXPXGFXGGGP 568
GGGG P GF GGGP
Sbjct: 10 GGGGGGPRGFGGGGP 24
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -1
Query: 1204 PXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPPXX 1025
P P P PPP R P R PPP + PPPP PP
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPY--APPPPSHPLAPPPPHI 59
Query: 1024 XKXXXXPP 1001
PP
Sbjct: 60 SPPAPVPP 67
>07_01_1143 - 10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 1070 PPPPXFXGGGXPPXXXKKXGXPPP 999
PPPP + GG PP G PP
Sbjct: 410 PPPPYYHGGQYPPYYPPYGGYMPP 433
>01_05_0433 - 22094784-22095659
Length = 291
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 551 GGGXXXGPPPXXPXGKKPPPP 613
GGG PPP P G+ PPPP
Sbjct: 36 GGGGAARPPPMVP-GRVPPPP 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,713,033
Number of Sequences: 37544
Number of extensions: 650636
Number of successful extensions: 2836
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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