Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K23.2
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.007
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.020
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.020
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.33
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.33
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.33
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.76
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.76
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 3.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 7.0
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 7.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 7.0
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 9.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 9.3
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -1
Query: 1192 GPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPPXXXKXX 1013
G P F PPP G G PPP F PPPP GG PP
Sbjct: 55 GQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMM--GGIPPPPPMFG 112
Query: 1012 XXPP 1001
PP
Sbjct: 113 APPP 116
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.020
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Frame = -1
Query: 1252 PPISLXXHFWXPXXAXPXXXGPXXXX-PFFXFPPPXXRGXPXGXXGXXRXPPPXQXF-FF 1079
PP W P P P P PPP R P G G PPP +
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 1078 FXXPPPPXFXGGG---XPPXXXKXXXXPP 1001
PPPP + G PP PP
Sbjct: 347 MPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.020
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Frame = -1
Query: 1252 PPISLXXHFWXPXXAXPXXXGPXXXX-PFFXFPPPXXRGXPXGXXGXXRXPPPXQXF-FF 1079
PP W P P P P PPP R P G G PPP +
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 1078 FXXPPPPXFXGGG---XPPXXXKXXXXPP 1001
PPPP + G PP PP
Sbjct: 357 MPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPP 1031
PPP G P G PPP PPPP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPP 1031
PPP G P G PPP PPPP GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPP 1031
PPP G P G PPP PPPP GG PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.76
Identities = 29/87 (33%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Frame = -1
Query: 1273 PPTXF*XPPISLXXHFWXPXXAXPXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPX 1094
PP F PP HF P P G PF PP G P G PPP
Sbjct: 291 PPFGFFPPPPR--GHFPPPP---PHFMGRGMPPPFMPPPPHFGMGPPRGFM-----PPPH 340
Query: 1093 QXFFF------FXXPPPPXFXGGGXPP 1031
F F PPPP F PP
Sbjct: 341 PMMFRGGPYPPFFPPPPPHFMRPSSPP 367
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.76
Identities = 29/87 (33%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Frame = -1
Query: 1273 PPTXF*XPPISLXXHFWXPXXAXPXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXPPPX 1094
PP F PP HF P P G PF PP G P G PPP
Sbjct: 291 PPFGFFPPPPR--GHFPPPP---PHFMGRGMPPPFMPPPPHFGMGPPRGFM-----PPPH 340
Query: 1093 QXFFF------FXXPPPPXFXGGGXPP 1031
F F PPPP F PP
Sbjct: 341 PMMFRGGPYPPFFPPPPPHFMRPSSPP 367
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 1002 GGXXXFFXXXGGXPPPXKXGGGGXXKKKKXXXGGGXLXXPXXPXGXPLXXGGG 1160
GG GG PP GGG GGG P P G GGG
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 551 GGGXXXGPPPXXPXGKKPPPPXXXFXXXXGGXKKKXXFXKXPXXKKKGGGXXXXXXGGG 727
GGG P P PPPP GG + GGG GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 1002 GGXXXFFXXXGGXPPPXKXGGGGXXKKKKXXXGGGXLXXPXXPXGXPLXXGGG 1160
GG GG PP GGG GGG P P G GGG
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 551 GGGXXXGPPPXXPXGKKPPPPXXXFXXXXGGXKKKXXFXKXPXXKKKGGGXXXXXXGGG 727
GGG P P PPPP GG + GGG GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 3.1
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 7/101 (6%)
Frame = -1
Query: 1252 PPISLXXHFWXPXX---AXPXXXGPXXXXPFFXFPPPXXRGXPXGXXGXXRXP----PPX 1094
PP + HF P P P P F PP R P G R PP
Sbjct: 114 PPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHR-PPEHYPGPPRPQAPAAPPP 172
Query: 1093 QXFFFFXXPPPPXFXGGGXPPXXXKXXXXPPXXFFFFXXXP 971
+ F P P F P PP FF P
Sbjct: 173 KSLFPSAQKPKPLFAAASSAPSFFGAPQRPPPQLHFFQESP 213
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Frame = -1
Query: 1156 PPXXRGXPXGXXGXXRXPPPX-QXFFFFXXPPPPXFXGGG------XPPXXXKXXXXPPX 998
PP +G P + PPP Q F PPPP G G PP PP
Sbjct: 726 PPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
Query: 997 XF 992
F
Sbjct: 786 SF 787
Score = 29.1 bits (62), Expect = 7.0
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXF----FFFXXPPPPXFXGG---GXPP 1031
PPP G P PPP Q F PPPP F G G PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPP 757
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 1091 LXGGGXPXXPXGXXGXPPXXGG 1156
+ GGG P P G G PP GG
Sbjct: 158 MGGGGDPRGPPGGMGGPPGHGG 179
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 1091 LXGGGXPXXPXGXXGXPPXXGG 1156
+ GGG P P G G PP GG
Sbjct: 438 MGGGGDPRGPPGGMGGPPGHGG 459
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 1108 PLXXPGXPGGPPXKXGGEXKKRXXXXKGPXXXAXPPWXAKNGG 1236
P PG P GPP G + +GP PP A N G
Sbjct: 182 PAGGPG-PAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPG 223
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPP 1031
PPP P G + PP Q + PPP G G PP
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1
Query: 1159 PPPXXRGXPXGXXGXXRXPPPXQXFFFFXXPPPPXFXGGGXPP 1031
PPP P G + PP Q + PPP G G PP
Sbjct: 694 PPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,090
Number of Sequences: 27780
Number of extensions: 401931
Number of successful extensions: 1538
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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