Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K20.2
         (1313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    28   8.3  
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    28   8.3  

>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect(2) = 8.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 14  PLHGAXLSXXPSVPXLXASLPFXFSXXSFXPPPPPP 121
           P HG  +   PS P   +++P   +     PPPPPP
Sbjct: 893 PTHGRPVIASPSYPC-HSAIPHAGASLPPPPPPPPP 927



 Score = 21.4 bits (43), Expect(2) = 8.3
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 104 PPPPPPXXRXXXSPIXXXG 160
           PPPPPP       P    G
Sbjct: 932 PPPPPPPPPPPPPPALDVG 950


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect(2) = 8.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 14  PLHGAXLSXXPSVPXLXASLPFXFSXXSFXPPPPPP 121
           P HG  +   PS P   +++P   +     PPPPPP
Sbjct: 893 PTHGRPVIASPSYPC-HSAIPHAGASLPPPPPPPPP 927



 Score = 21.4 bits (43), Expect(2) = 8.3
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 104 PPPPPPXXRXXXSPIXXXG 160
           PPPPPP       P    G
Sbjct: 932 PPPPPPPPPPPPPPALDVG 950


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,420,359
Number of Sequences: 237096
Number of extensions: 1630437
Number of successful extensions: 16039
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8776
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18990949350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)