Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K19.2
         (1320 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1228 - 25009736-25010965                                         33   0.66 
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701...    31   2.7  
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    30   4.7  
08_01_0047 - 328895-329404,329492-329821,330253-330626,330712-33...    30   4.7  
05_07_0251 - 28677293-28677748,28677891-28678217                       30   4.7  
12_01_0166 - 1241367-1241879,1241959-1242274,1243197-1243266,124...    29   6.2  
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294...    29   8.2  
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849...    29   8.2  

>07_03_1228 - 25009736-25010965
          Length = 409

 Score = 32.7 bits (71), Expect = 0.66
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 EHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEHV 755
           EHQ +   L++  + C+ C + G  +C RCK+C    HV
Sbjct: 12  EHQLTRTKLKNP-FNCKVCTKPGDTTCYRCKSCKFSIHV 49


>01_07_0344 -
           42869465-42869502,42869597-42869771,42869923-42870117,
           42870678-42870788,42870899-42871111,42871551-42871658,
           42871732-42871873,42872150-42873449,42874032-42874085,
           42874491-42874923
          Length = 922

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -2

Query: 698 VTRLTLVGFRFQNLT*GL-MLKLVIFAQKSLAETAPENPTTMLPYTSLALQAHGIHERTG 522
           V +L ++ F+ + +T  L M++   +   +  + A  N T +L  +S  +Q +G+H  TG
Sbjct: 159 VLKLLIILFKAKEITSDLYMMQDDSYQHDTDRQGANCNGTDLL--SSSKVQ-YGLHRETG 215

Query: 521 ARMGRETFSTMTHPCLTEVTYSTHHSHSRVVNTWMSNN 408
           A  G  + S    PCL E    + HS++ ++ + +S +
Sbjct: 216 AISGLHSDSKA--PCLPENQNESSHSYASIIGSSLSRS 251


>08_02_0864 +
           21994286-21994989,21996257-21996958,21997221-21997374,
           21997494-21997838,21998323-21999240,21999312-21999640,
           21999709-21999832,21999901-22000071,22000188-22001648,
           22002647-22002910,22003866-22004189
          Length = 1831

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +3

Query: 324 CYFCQA----VQXLPTCAHCGKVKCMLKSGXCVIRHPGVYNTGMGMVGAICDFC 473
           CY C A    +     C HCG+V C   +   V R PG      G    +C++C
Sbjct: 70  CYDCDAQFTILNRRHHCRHCGRVFCARCTANSVPRAPGDAAREDGERIRVCNYC 123


>08_01_0047 -
           328895-329404,329492-329821,330253-330626,330712-330937,
           331026-331475
          Length = 629

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 616 FCAKMTSLSIRPHVKFWNRKPTSVNRV 696
           FC   T   I+ H+K W +K T +NR+
Sbjct: 407 FCTNFTGDQIKNHLKTWQKKFTKMNRL 433


>05_07_0251 - 28677293-28677748,28677891-28678217
          Length = 260

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 616 FCAKMTSLSIRPHVKFWNRKPTSVNRV 696
           FC   T   I+ H+K W +K T +NR+
Sbjct: 56  FCTNFTGDQIKNHLKTWQKKFTKMNRL 82


>12_01_0166 -
           1241367-1241879,1241959-1242274,1243197-1243266,
           1243351-1243576,1243664-1243851,1244065-1244176,
           1245371-1245664
          Length = 572

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 610 KDFCAKMTSLSIRPHVKFWNRKPTSVNRV 696
           K F + +T   I+ H+K W RK T +NR+
Sbjct: 347 KRFNSTLTGEQIKNHLKTWQRKFTKINRL 375


>04_04_1374 -
           33028790-33028951,33029033-33029087,33029402-33029466,
           33029558-33029701,33029825-33029878,33029971-33030220,
           33030340-33030446,33031206-33031216,33032682-33032796,
           33032897-33033005,33033088-33033203,33033288-33033647
          Length = 515

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = +3

Query: 285 CXKCQKKQKPRAFCYFCQAVQXLPTCAHCGKVKCMLKSGXCVIRH 419
           C  CQK+ K    C  CQ    L  C  CG V C        IRH
Sbjct: 239 CQFCQKQSK-NPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRH 282


>02_02_0277 +
           8489717-8491468,8491571-8491610,8491719-8491841,
           8491959-8492014
          Length = 656

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = -1

Query: 678 RFPIPKLDMRPDAQTGHLRTKILGRNSTGKPDHHAPIHLSRTPSTRHP 535
           +FP P +D+R   ++  ++  ++  +S  +P  H P + +RTPS + P
Sbjct: 432 KFPPPPIDVRFLDRSDSVKHHMV-LDSKSRPLSHTPTYSARTPSMKKP 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,381,108
Number of Sequences: 37544
Number of extensions: 480992
Number of successful extensions: 1357
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)