BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K19.2
(1320 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122179-1|AAM52691.1| 315|Drosophila melanogaster LD37139p pro... 378 e-105
AJ131564-1|CAB39165.1| 313|Drosophila melanogaster nucleolar pr... 378 e-105
AE014297-4242|AAF56799.1| 315|Drosophila melanogaster CG10009-P... 378 e-105
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha... 35 0.29
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me... 35 0.29
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro... 35 0.29
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro... 35 0.29
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB... 35 0.29
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA... 35 0.29
AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p pro... 34 0.38
AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA ... 34 0.38
AE014296-3097|AAF49199.1| 530|Drosophila melanogaster CG18136-P... 30 6.1
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 30 8.1
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 30 8.1
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 30 8.1
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 30 8.1
>AY122179-1|AAM52691.1| 315|Drosophila melanogaster LD37139p
protein.
Length = 315
Score = 378 bits (931), Expect = e-105
Identities = 152/207 (73%), Positives = 175/207 (84%)
Frame = +3
Query: 258 NIPXNVAMECXKCQKKQKPRAFCYFCQAVQXLPTCAHCGKVKCMLKSGXCVIRHPGVYNT 437
++P N MEC KC+KKQK RAFCYFCQ++Q LP CA CGK+KCMLK+G CV++HPGVY T
Sbjct: 31 DLPCNAPMECDKCEKKQKSRAFCYFCQSIQRLPICAQCGKIKCMLKTGDCVVKHPGVYTT 90
Query: 438 GMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRCCFCQGF 617
G+GMVGAICDFCEAWVCHGRKCL +HACTCPL +A CLECERGVWEHGGR+F+C FC GF
Sbjct: 91 GLGMVGAICDFCEAWVCHGRKCLQNHACTCPLQNATCLECERGVWEHGGRIFKCSFCNGF 150
Query: 618 LCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXP 797
LCEDDQFEHQASCQVLESE YKCQSCN++GQYSCLRCKTC+CE+HV
Sbjct: 151 LCEDDQFEHQASCQVLESENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI- 209
Query: 798 PCPKCSYPTALTXDLSMSTRSHRYGRQ 878
PCPKC+Y T++T DLSMSTRSH++GRQ
Sbjct: 210 PCPKCNYDTSVTKDLSMSTRSHKFGRQ 236
>AJ131564-1|CAB39165.1| 313|Drosophila melanogaster nucleolar
protein, putative protein.
Length = 313
Score = 378 bits (931), Expect = e-105
Identities = 152/207 (73%), Positives = 175/207 (84%)
Frame = +3
Query: 258 NIPXNVAMECXKCQKKQKPRAFCYFCQAVQXLPTCAHCGKVKCMLKSGXCVIRHPGVYNT 437
++P N MEC KC+KKQK RAFCYFCQ++Q LP CA CGK+KCMLK+G CV++HPGVY T
Sbjct: 31 DLPCNAPMECDKCEKKQKSRAFCYFCQSIQRLPICAQCGKIKCMLKTGDCVVKHPGVYTT 90
Query: 438 GMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRCCFCQGF 617
G+GMVGAICDFCEAWVCHGRKCL +HACTCPL +A CLECERGVWEHGGR+F+C FC GF
Sbjct: 91 GLGMVGAICDFCEAWVCHGRKCLQNHACTCPLQNATCLECERGVWEHGGRIFKCSFCNGF 150
Query: 618 LCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXP 797
LCEDDQFEHQASCQVLESE YKCQSCN++GQYSCLRCKTC+CE+HV
Sbjct: 151 LCEDDQFEHQASCQVLESENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI- 209
Query: 798 PCPKCSYPTALTXDLSMSTRSHRYGRQ 878
PCPKC+Y T++T DLSMSTRSH++GRQ
Sbjct: 210 PCPKCNYDTSVTKDLSMSTRSHKFGRQ 236
>AE014297-4242|AAF56799.1| 315|Drosophila melanogaster CG10009-PA
protein.
Length = 315
Score = 378 bits (931), Expect = e-105
Identities = 152/207 (73%), Positives = 175/207 (84%)
Frame = +3
Query: 258 NIPXNVAMECXKCQKKQKPRAFCYFCQAVQXLPTCAHCGKVKCMLKSGXCVIRHPGVYNT 437
++P N MEC KC+KKQK RAFCYFCQ++Q LP CA CGK+KCMLK+G CV++HPGVY T
Sbjct: 31 DLPCNAPMECDKCEKKQKSRAFCYFCQSIQRLPICAQCGKIKCMLKTGDCVVKHPGVYTT 90
Query: 438 GMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRCCFCQGF 617
G+GMVGAICDFCEAWVCHGRKCL +HACTCPL +A CLECERGVWEHGGR+F+C FC GF
Sbjct: 91 GLGMVGAICDFCEAWVCHGRKCLQNHACTCPLQNATCLECERGVWEHGGRIFKCSFCNGF 150
Query: 618 LCEDDQFEHQASCQVLESETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXP 797
LCEDDQFEHQASCQVLESE YKCQSCN++GQYSCLRCKTC+CE+HV
Sbjct: 151 LCEDDQFEHQASCQVLESENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI- 209
Query: 798 PCPKCSYPTALTXDLSMSTRSHRYGRQ 878
PCPKC+Y T++T DLSMSTRSH++GRQ
Sbjct: 210 PCPKCNYDTSVTKDLSMSTRSHKFGRQ 236
>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
protein.
Length = 1788
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 1124 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 1183
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 1184 PHCSPCGECF 1193
>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
D.melanogaster lamininB1 subunit mRNA, complete cds. ).
Length = 1788
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 1124 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 1183
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 1184 PHCSPCGECF 1193
>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p
protein.
Length = 1296
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 632 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 691
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 692 PHCSPCGECF 701
>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
protein.
Length = 1026
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 362 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 421
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 422 PHCSPCGECF 431
>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
isoform B protein.
Length = 1788
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 1124 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 1183
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 1184 PHCSPCGECF 1193
>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
isoform A protein.
Length = 1788
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 546 CLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQ-ASCQVLES-ETYKCQSCNR--IGQY 713
C +C+ W + + C C F D Q + + +C E YKC C R IGQ+
Sbjct: 1124 CNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 1183
Query: 714 -SCLRCKTCF 740
C C CF
Sbjct: 1184 PHCSPCGECF 1193
>AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.38
Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Frame = +3
Query: 351 LPTCAHCGKVKCMLKSGXCVIRHPGVYNTGMGMVGAICD--FCEAWVCHGRKCLTSHACT 524
L T C +KC K+G C H + +G G C+ FC +G C CT
Sbjct: 277 LTTLQECS-LKCG-KNGYCNEHH--ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCT 332
Query: 525 CPLMDAVCLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQ-SCNR 701
CP E +G GG C G + D+ + L E KC C
Sbjct: 333 CP-------EGYQGTQCEGGICKDKCLNGGKCIQKDKCQCSKGYYGLRCEYSKCVIPCKN 385
Query: 702 IGQYSCLRCKTCFC 743
G+ C+ C C
Sbjct: 386 EGR--CIGNNLCRC 397
>AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.38
Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Frame = +3
Query: 351 LPTCAHCGKVKCMLKSGXCVIRHPGVYNTGMGMVGAICD--FCEAWVCHGRKCLTSHACT 524
L T C +KC K+G C H + +G G C+ FC +G C CT
Sbjct: 277 LTTLQECS-LKCG-KNGYCNEHH--ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCT 332
Query: 525 CPLMDAVCLECERGVWEHGGRVFRCCFCQGFLCEDDQFEHQASCQVLESETYKCQ-SCNR 701
CP E +G GG C G + D+ + L E KC C
Sbjct: 333 CP-------EGYQGTQCEGGICKDKCLNGGKCIQKDKCQCSKGYYGLRCEYSKCVIPCKN 385
Query: 702 IGQYSCLRCKTCFC 743
G+ C+ C C
Sbjct: 386 EGR--CIGNNLCRC 397
>AE014296-3097|AAF49199.1| 530|Drosophila melanogaster CG18136-PA
protein.
Length = 530
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +3
Query: 543 VCLECERGVWEHG---GRVFRCCFCQGFLCE---DDQFEHQASCQVLESETYK 683
+CL C R + G G +C C LC +D H+A CQ++ ++
Sbjct: 90 LCLGCHRNLLAPGKPRGNYHKCSSCSWPLCGKECEDSVHHKAECQLMSGSNFQ 142
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 420 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 599
PG Y G G C CE C+G H+ TC +C +C+ G G RC
Sbjct: 1792 PGYYRDPSGPYGGYCIPCE---CNG------HSETCDCATGICSKCQHGT--EGDHCERC 1840
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 420 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 599
PG Y G G C CE C+G H+ TC +C +C+ G G RC
Sbjct: 31 PGYYRDPSGPYGGYCIPCE---CNG------HSETCDCATGICSKCQHGT--EGDHCERC 79
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 420 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 599
PG Y G G C CE C+G H+ TC +C +C+ G G RC
Sbjct: 1792 PGYYRDPSGPYGGYCIPCE---CNG------HSETCDCATGICSKCQHGT--EGDHCERC 1840
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 420 PGVYNTGMGMVGAICDFCEAWVCHGRKCLTSHACTCPLMDAVCLECERGVWEHGGRVFRC 599
PG Y G G C CE C+G H+ TC +C +C+ G G RC
Sbjct: 1792 PGYYRDPSGPYGGYCIPCE---CNG------HSETCDCATGICSKCQHGT--EGDHCERC 1840
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,397,521
Number of Sequences: 53049
Number of extensions: 829016
Number of successful extensions: 2597
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7171332960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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