Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K11.2
(1331 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729... 95 8e-20
12_02_0454 + 19199063-19200757,19202201-19202287 33 0.38
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 33 0.67
03_06_0146 - 31976538-31978643,31978653-31978751 33 0.67
03_06_0195 + 32256771-32258792 32 0.89
01_05_0484 - 22621614-22621676,22621798-22621911,22622006-226224... 32 1.2
05_05_0317 + 24039343-24042717 31 2.1
10_08_0497 - 18336819-18337140,18337226-18337360,18337579-183376... 30 4.7
06_01_0626 + 4549661-4550947 30 4.7
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 29 6.3
06_03_1512 - 30688098-30688133,30688401-30688537,30688744-306888... 29 8.3
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 29 8.3
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 29 8.3
>06_03_1229 +
28571131-28571235,28572108-28572656,28572749-28572918,
28573454-28573669,28573787-28573946
Length = 399
Score = 95.5 bits (227), Expect = 8e-20
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Frame = +2
Query: 275 FEARAKAHXXSQNEKQAXSQY-CQCCSKLFSTKXSYNNHLNSKXHKVSVEKYTESQKDQE 451
F AR A N Y C C K + + ++ HLNS+ H + + QE
Sbjct: 47 FLARQTALAEGSNSDSTPMLYSCALCGKEYRSSKAHAQHLNSRSHLM--------KASQE 98
Query: 452 NSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGED---IETD-SEIEELDSDEWDECR 619
+ + VK R+ V D E+ +E D SE+E + DE
Sbjct: 99 PNASIAGITIVKPR--PERVQRRAPSAVEEDEDEDEEEEWVEVDPSELESTSEMQVDEHS 156
Query: 620 IQESDSL-----IKPRDCLFCVHHSKNMVKNLKHMSEAHSFFIPDVEFCINIRGLLLYLG 784
+ D + + P C C + + HM + H FFIPD E+ + GLL+Y+G
Sbjct: 157 SKSDDEIDEFEELDPTFCFMCDLEHDTIENCMVHMHKKHGFFIPDSEYLKDPNGLLIYVG 216
Query: 785 EKISQGYMCLWCNDTGRTFYSMEAARAHMIDKGHCKM 895
K+ + ++CL+CND + F S+EA R HM KGHCK+
Sbjct: 217 LKVKRDFICLYCNDRCQPFQSLEAVRKHMDAKGHCKV 253
>12_02_0454 + 19199063-19200757,19202201-19202287
Length = 593
Score = 33.5 bits (73), Expect = 0.38
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +2
Query: 317 KQAXSQYCQCCSKLFSTKXSYNNHLNSKXH--KVS-----VEKYTESQKDQENSGQSDTD 475
K+ YC C+K F + + NH SK H KVS E+ E+ KD E + D
Sbjct: 305 KRKEELYCVACNKKFKSDKQWKNHEQSKKHRDKVSELRMVFEEEEEALKDAEEEEPEEVD 364
Query: 476 SFVKVECTTGLTNERSKFVVVNTTDSGEDI--ETDSEIEELDSDE 604
V + +E S+F +D+ E++ E +E D +E
Sbjct: 365 --VGFDFQPAQESEESEF-----SDAAEELADELSEGLEVRDEEE 402
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 32.7 bits (71), Expect = 0.67
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 422 KYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSD 601
K E Q + N +D + +V V+ + L E S+ T+ +D+E EE D D
Sbjct: 548 KVVEEQPQEVNETINDEEEYVLVDQESQLQVEESE-----KTEPDQDVEELKPEEEEDED 602
Query: 602 EWD 610
EWD
Sbjct: 603 EWD 605
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 32.7 bits (71), Expect = 0.67
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 431 ESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWD 610
ES +++++G SD ++ + T T+E S + +TTD D + D+E + +SD +
Sbjct: 187 ESDPEEDDTGSSDLET--DSDEYTESTDEESDYEEEDTTDLESDSDEDTESTDEESDYEE 244
Query: 611 ECRIQESD 634
E +E D
Sbjct: 245 EIDDEEID 252
>03_06_0195 + 32256771-32258792
Length = 673
Score = 32.3 bits (70), Expect = 0.89
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 431 ESQKDQENSGQSD--TDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDE 604
ES ++E+ G SD TDS +E T +E S + +TTD D + D+E E DE
Sbjct: 178 ESDPEEEDIGSSDLETDSDEYIEST----DEESDYEEEDTTDLESDSDEDTESTESSHDE 233
Query: 605 WD 610
D
Sbjct: 234 DD 235
>01_05_0484 -
22621614-22621676,22621798-22621911,22622006-22622453,
22623052-22623179,22623747-22623821,22623954-22624040
Length = 304
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +2
Query: 335 YCQCCSKLFSTKXSYNNHLNSKXHKVSVEKYTESQKDQENSGQSDTDSF-VKVECTTGLT 511
+C C ++K + +H + K H+ + Y SQK Q+ ++ V + +
Sbjct: 95 FCSLCKTTTTSKQTLLSHADGKKHRAKAKAYHASQKQANGVEQTPKETVGAPVTESAQVN 154
Query: 512 NERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDSL 640
NERS N D + S+E D + Q + S+
Sbjct: 155 NERS---TENERGVDNDAAKRKRANDTTSEEPDNTKRQNNLSV 194
>05_05_0317 + 24039343-24042717
Length = 1124
Score = 31.1 bits (67), Expect = 2.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 971 HLHDQDM-KNCNHSNLHTPLKQDLRVTSCNVPYQSCGPVLLPLSRMSFQCHYTIGTYIPV 795
H++D +M +L P+ +DLR+TSC+ P+L L+ +S H TI
Sbjct: 960 HIYDCEMLAPSEQHSLLPPMLEDLRITSCS---NLINPLLQELNELSSLIHLTITNCANF 1016
Query: 794 ISF 786
SF
Sbjct: 1017 YSF 1019
>10_08_0497 -
18336819-18337140,18337226-18337360,18337579-18337673,
18337759-18337845,18337923-18338129,18338209-18338535,
18338711-18338803,18338861-18339175,18339283-18339792,
18339889-18339960,18341209-18341256,18341427-18341551,
18341640-18341661
Length = 785
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 920 PLKQDLRVTSCNVPYQSCGPVLLPLSRMSFQCHYTIGTYIPVISFLL 780
PL Q + +C VP PV L +M + GT+IPV S LL
Sbjct: 432 PLTQIIHGVACLVPSARYFPVRLRCVKMLNRIAEATGTFIPVSSLLL 478
>06_01_0626 + 4549661-4550947
Length = 428
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 893 SCNVPYQSCGPVLLPLSRMSFQCHYTIGT 807
SCN PY S G V L + + + +CH + GT
Sbjct: 392 SCNNPYGSNGKVELRMIKHNSKCHMSYGT 420
>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -1
Query: 1022 SSVQDHXFXHQHSYLPFHLHDQDMKNCNHSNLHTPLKQDLRVTSCNVPYQSCGPVLLPLS 843
SS++++ + QH+ H H+ + + +N P+ V++ + +L+PL
Sbjct: 671 SSIEEYFYQKQHATCMDHAHEIIRRIRDDANKSEPISDSNVVSNLYLSNDDIAKLLVPLL 730
Query: 842 RM-SFQCHYTIGTY 804
++ CH +G++
Sbjct: 731 KLRQACCHPQVGSF 744
>06_03_1512 -
30688098-30688133,30688401-30688537,30688744-30688834,
30689265-30690815
Length = 604
Score = 29.1 bits (62), Expect = 8.3
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 365 TKXSYNNHLNSKXHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTG---LTNERSKFVV 535
+K Y H +S + ES + D +K+E G +NE +
Sbjct: 274 SKHRYGRHTDSFQQGRLATESMESPLLERTLEIRDRSYKLKIESCRGNKSQSNEAQQRPS 333
Query: 536 VNTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRDCL 661
+TT S ++I+ +S + D DE+ I+ ++ L K R+C+
Sbjct: 334 HHTTTS-DNIDDESNAVDSDGDEFSHNVIEAAEILRKARECM 374
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 1022 SSVQDHXFXHQHSYLPFHLHDQDMKNC-NHSNLHTPLKQ 909
++ DH H H P H H + C +HS+ H+ K+
Sbjct: 757 NACHDHHHEHNHHEEPAHKHSSNQHGCHDHSHGHSNCKE 795
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 407 KVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERS 523
K K+ ES K + GQ S V C+TG+ +E S
Sbjct: 1181 KAEQSKFAESMKSSGSEGQDVPMSEPDVSCSTGVVSEES 1219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,565,946
Number of Sequences: 37544
Number of extensions: 377418
Number of successful extensions: 960
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4178635068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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