Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K08.2
(1297 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 366 e-100
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 347 5e-94
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 293 9e-78
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 257 4e-67
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 219 1e-55
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 204 5e-51
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 203 9e-51
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 202 1e-50
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 194 6e-48
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 192 2e-47
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 191 3e-47
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 186 8e-46
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 184 3e-45
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 184 6e-45
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 182 1e-44
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 182 2e-44
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 181 4e-44
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 178 3e-43
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 177 4e-43
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 175 2e-42
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 175 3e-42
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 174 4e-42
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 169 1e-40
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 169 2e-40
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 167 4e-40
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 165 2e-39
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 165 3e-39
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 164 4e-39
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 163 7e-39
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 163 7e-39
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 163 1e-38
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 163 1e-38
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 162 2e-38
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 162 2e-38
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 162 2e-38
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 161 5e-38
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 161 5e-38
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 161 5e-38
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 160 6e-38
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 160 6e-38
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 160 8e-38
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 160 8e-38
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 159 1e-37
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 159 2e-37
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 159 2e-37
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 158 3e-37
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 157 4e-37
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 157 6e-37
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 157 6e-37
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 157 6e-37
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 157 8e-37
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 157 8e-37
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 157 8e-37
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 156 1e-36
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 156 1e-36
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 156 1e-36
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 155 2e-36
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 155 3e-36
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 155 3e-36
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 154 4e-36
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 154 4e-36
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 153 7e-36
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 153 7e-36
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 153 1e-35
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 153 1e-35
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 153 1e-35
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 153 1e-35
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 153 1e-35
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 153 1e-35
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 152 2e-35
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 152 2e-35
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 152 2e-35
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 152 2e-35
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 152 2e-35
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 152 2e-35
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 152 2e-35
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 151 5e-35
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 150 7e-35
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 150 7e-35
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 150 7e-35
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 150 7e-35
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 150 7e-35
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 150 9e-35
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 150 9e-35
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 150 9e-35
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 150 9e-35
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 149 1e-34
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 149 1e-34
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 149 2e-34
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 149 2e-34
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 149 2e-34
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 149 2e-34
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 149 2e-34
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 149 2e-34
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 148 3e-34
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 148 3e-34
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 148 4e-34
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 148 4e-34
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 147 5e-34
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 147 5e-34
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 147 6e-34
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 146 8e-34
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 146 8e-34
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 146 8e-34
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 146 8e-34
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 146 1e-33
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 146 1e-33
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 145 2e-33
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 145 2e-33
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 145 2e-33
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 145 2e-33
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 145 3e-33
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 145 3e-33
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 144 3e-33
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 144 4e-33
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 144 4e-33
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 143 8e-33
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 143 1e-32
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 143 1e-32
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 142 1e-32
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 142 2e-32
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 142 2e-32
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 142 2e-32
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 142 2e-32
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 142 2e-32
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 142 2e-32
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 141 3e-32
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 141 3e-32
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 141 3e-32
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 141 4e-32
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 141 4e-32
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 140 5e-32
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 140 5e-32
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 140 7e-32
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 140 7e-32
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 140 9e-32
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 140 9e-32
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 140 9e-32
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 140 9e-32
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 139 1e-31
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 139 1e-31
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 139 1e-31
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 139 1e-31
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 139 1e-31
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 139 2e-31
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 139 2e-31
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 138 2e-31
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 138 2e-31
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 138 4e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 138 4e-31
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 137 5e-31
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 137 5e-31
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 137 5e-31
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 137 5e-31
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 137 5e-31
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 137 7e-31
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 137 7e-31
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 137 7e-31
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 137 7e-31
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 136 9e-31
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 136 9e-31
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 136 9e-31
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 136 1e-30
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 136 2e-30
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 136 2e-30
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 136 2e-30
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 136 2e-30
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 135 2e-30
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 135 2e-30
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 135 2e-30
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 135 2e-30
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 135 2e-30
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 135 2e-30
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 135 2e-30
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 135 3e-30
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 135 3e-30
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 135 3e-30
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 135 3e-30
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 135 3e-30
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 134 4e-30
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 134 4e-30
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 134 4e-30
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 134 4e-30
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 134 5e-30
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 134 5e-30
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 134 5e-30
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 134 6e-30
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 134 6e-30
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 134 6e-30
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 134 6e-30
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 134 6e-30
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 134 6e-30
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 133 8e-30
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 133 8e-30
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 133 8e-30
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 133 8e-30
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 133 1e-29
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 133 1e-29
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 133 1e-29
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 133 1e-29
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 133 1e-29
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 132 1e-29
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 132 1e-29
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 132 1e-29
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 132 1e-29
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 132 1e-29
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 132 2e-29
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 132 2e-29
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 132 2e-29
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 132 2e-29
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 132 2e-29
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 132 2e-29
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 132 2e-29
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 132 2e-29
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 132 2e-29
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 132 3e-29
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 132 3e-29
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 132 3e-29
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 131 3e-29
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 131 3e-29
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 131 3e-29
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 131 3e-29
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 131 4e-29
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 131 4e-29
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 130 6e-29
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 130 6e-29
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 130 6e-29
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 130 6e-29
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 130 8e-29
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 130 8e-29
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 130 8e-29
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 130 8e-29
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 130 1e-28
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 130 1e-28
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 130 1e-28
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 129 1e-28
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 129 1e-28
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 129 1e-28
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 129 2e-28
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 129 2e-28
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 128 2e-28
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 128 2e-28
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 128 2e-28
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 128 2e-28
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 128 2e-28
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 128 2e-28
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 128 3e-28
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 128 3e-28
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 128 3e-28
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 128 4e-28
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 128 4e-28
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 128 4e-28
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 127 5e-28
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 127 5e-28
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 127 5e-28
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 127 5e-28
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 127 5e-28
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 127 7e-28
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 127 7e-28
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 126 9e-28
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 126 9e-28
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 126 1e-27
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 126 1e-27
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 126 1e-27
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 126 2e-27
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 126 2e-27
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 126 2e-27
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 126 2e-27
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 126 2e-27
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 126 2e-27
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 126 2e-27
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 126 2e-27
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 126 2e-27
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 2e-27
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 126 2e-27
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 126 2e-27
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 126 2e-27
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 126 2e-27
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 125 2e-27
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 125 2e-27
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 125 2e-27
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 125 2e-27
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 125 2e-27
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 125 2e-27
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 125 2e-27
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 125 2e-27
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 125 3e-27
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 124 4e-27
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 124 4e-27
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 124 5e-27
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 124 5e-27
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 124 5e-27
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 124 5e-27
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 124 5e-27
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 124 5e-27
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 124 7e-27
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 124 7e-27
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 124 7e-27
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 124 7e-27
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 124 7e-27
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 124 7e-27
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 123 9e-27
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 123 9e-27
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 123 9e-27
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 123 9e-27
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 123 9e-27
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 123 9e-27
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 123 1e-26
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 123 1e-26
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 123 1e-26
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 123 1e-26
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 123 1e-26
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 122 2e-26
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 122 2e-26
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 122 2e-26
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 2e-26
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 122 2e-26
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 122 2e-26
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 122 2e-26
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 122 2e-26
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 122 2e-26
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 122 3e-26
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 122 3e-26
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 121 4e-26
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 121 4e-26
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 121 4e-26
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 121 4e-26
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 121 4e-26
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 121 4e-26
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 121 4e-26
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 121 4e-26
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 121 5e-26
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 121 5e-26
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 5e-26
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 121 5e-26
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 120 6e-26
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 120 6e-26
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 120 6e-26
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 120 6e-26
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 120 1e-25
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 120 1e-25
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 120 1e-25
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 120 1e-25
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 119 1e-25
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 119 1e-25
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 119 1e-25
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 119 1e-25
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 119 1e-25
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 119 1e-25
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 119 2e-25
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 119 2e-25
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 119 2e-25
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 119 2e-25
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 118 3e-25
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 118 3e-25
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 118 3e-25
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 118 3e-25
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 118 3e-25
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 118 3e-25
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 118 3e-25
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 118 3e-25
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 118 3e-25
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 118 3e-25
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 118 3e-25
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 118 3e-25
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 118 3e-25
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 118 3e-25
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 118 4e-25
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 118 4e-25
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 117 6e-25
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 117 6e-25
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 117 6e-25
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 117 8e-25
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 117 8e-25
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 117 8e-25
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 117 8e-25
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 116 1e-24
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 1e-24
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 116 1e-24
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 116 1e-24
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 116 1e-24
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 116 1e-24
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 116 2e-24
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 116 2e-24
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 116 2e-24
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 116 2e-24
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 115 2e-24
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 115 2e-24
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 115 2e-24
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 115 2e-24
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 115 2e-24
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 115 3e-24
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 115 3e-24
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 115 3e-24
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 115 3e-24
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 115 3e-24
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 115 3e-24
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 115 3e-24
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 114 4e-24
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 114 4e-24
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 114 4e-24
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 114 4e-24
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 114 4e-24
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 114 4e-24
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 114 4e-24
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 114 4e-24
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 114 4e-24
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 114 5e-24
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 114 5e-24
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 114 5e-24
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 114 5e-24
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 114 5e-24
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 113 7e-24
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 113 7e-24
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 113 7e-24
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 113 7e-24
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 113 9e-24
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 113 9e-24
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 113 9e-24
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 113 1e-23
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 113 1e-23
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 113 1e-23
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 113 1e-23
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 112 2e-23
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 112 2e-23
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 112 2e-23
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 112 2e-23
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 112 2e-23
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 112 2e-23
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 112 2e-23
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 112 2e-23
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 112 2e-23
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 112 2e-23
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 111 3e-23
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 111 3e-23
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 111 3e-23
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 111 3e-23
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 111 3e-23
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 111 3e-23
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 111 4e-23
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 111 4e-23
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 111 4e-23
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 111 4e-23
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 111 4e-23
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 111 4e-23
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 111 4e-23
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 111 5e-23
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 111 5e-23
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 111 5e-23
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 5e-23
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 111 5e-23
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 111 5e-23
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 111 5e-23
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 111 5e-23
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 110 7e-23
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 110 7e-23
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 110 7e-23
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 110 7e-23
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 110 7e-23
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 110 9e-23
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 110 9e-23
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 110 9e-23
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 110 9e-23
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 109 1e-22
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 109 1e-22
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 109 1e-22
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 109 1e-22
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 109 1e-22
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 109 1e-22
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 109 1e-22
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 109 1e-22
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 109 1e-22
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 109 1e-22
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 109 2e-22
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 109 2e-22
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 109 2e-22
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 109 2e-22
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 109 2e-22
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 109 2e-22
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 109 2e-22
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 109 2e-22
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 108 3e-22
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 108 3e-22
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 108 3e-22
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 108 3e-22
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 108 3e-22
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 108 4e-22
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 108 4e-22
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 108 4e-22
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 108 4e-22
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 108 4e-22
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 107 5e-22
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 107 5e-22
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 107 5e-22
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 107 5e-22
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 107 6e-22
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 107 6e-22
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 98 7e-22
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 98 7e-22
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 366 bits (900), Expect = e-100
Identities = 173/259 (66%), Positives = 214/259 (82%), Gaps = 1/259 (0%)
Frame = +3
Query: 192 PGSTCXPTGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQS 371
P +++V FD M LK +LL G YA GFEKPSA+QQRAI+PCI+G VIAQAQS
Sbjct: 20 PDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQS 79
Query: 372 GTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 551
GTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV++ALGD++ A CHACIGGT
Sbjct: 80 GTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGT 139
Query: 552 NVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHD 728
NVR ++++L++ H+VVGTPGRV+DM+ RR L IK+FVLDEADEMLSRGFKDQI++
Sbjct: 140 NVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYE 199
Query: 729 VFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXW 908
+F+ L+ +QV+LLSATMP DVLEV++ FMRDP+RILV+KEELTLEGIKQFYI +E W
Sbjct: 200 IFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEW 259
Query: 909 KLETLCXLYDTLSIAQAVI 965
KL+TLC LY+TL+I QAVI
Sbjct: 260 KLDTLCDLYETLTITQAVI 278
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 347 bits (852), Expect = 5e-94
Identities = 163/247 (65%), Positives = 202/247 (81%)
Frame = +3
Query: 225 VVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSIS 404
V TFD M L+ LL G YA GFEKPSA+QQRAI I+GR VIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
L+SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF++A+E WK +TLC LYDTL
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 275
Query: 945 SIAQAVI 965
+I QAVI
Sbjct: 276 TITQAVI 282
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 293 bits (718), Expect = 9e-78
Identities = 146/247 (59%), Positives = 184/247 (74%)
Frame = +3
Query: 225 VVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSIS 404
V TFD M L+ LL G YA GFEKPSA+QQRAI I+GR VIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+LQ +D Q L+ ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDI-----QGLL----------------ALGDYMNVQCHACIGGTNVGEDIRKLDY 134
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+
Sbjct: 135 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 194
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
L+SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF++A+E WK +TLC LYDTL
Sbjct: 195 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 254
Query: 945 SIAQAVI 965
+I QAVI
Sbjct: 255 TITQAVI 261
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 257 bits (630), Expect = 4e-67
Identities = 120/247 (48%), Positives = 176/247 (71%), Gaps = 1/247 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V TF+ + L LL G ++ GFE+PSA+QQ+AI P I G+ V+AQAQSGTGKT TF+I
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGA 114
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN + CIGGT+ +E + + G
Sbjct: 115 LQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQETREKCKQG 174
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
VH+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF D ++ KM+ D+Q+ L
Sbjct: 175 VHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEILKMVPGDIQIAL 234
Query: 768 LSATMPDDVLEVSRCFMRD-PVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SAT P +++E+S+ F+RD +ILV+KE+LTLEGI+QFYIAI+ K + L LY L
Sbjct: 235 FSATFPQEIIELSKQFLRDGTAKILVKKEQLTLEGIRQFYIAIQQEDQKFKVLVELYKNL 294
Query: 945 SIAQAVI 965
+++Q+++
Sbjct: 295 TVSQSIL 301
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 219 bits (536), Expect = 1e-55
Identities = 104/244 (42%), Positives = 159/244 (65%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF++M L+ LL G A GF +P VQQRA++P IQGR V+ Q TGKT S+S+L
Sbjct: 23 TFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLSVLS 82
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
D S+++ Q LIL TR+L ++ +++ALG LN HAC G ++++DI ++ GV
Sbjct: 83 IFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDISVVQQGVQ 142
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+V+GTP RV++++ R+ + +K+ +LDEADEML K ++ +FK L Q +L++
Sbjct: 143 IVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYVLVT 202
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT+ D+L+ F +P+ I+ ++ ELTLEGI+QF+I ++ WK ETLC LY+ SI
Sbjct: 203 ATLSQDILDFIEKFFNNPLVIMDKRNELTLEGIQQFFIQVDKEDWKFETLCDLYEIASIT 262
Query: 954 QAVI 965
Q+VI
Sbjct: 263 QSVI 266
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 204 bits (497), Expect = 5e-51
Identities = 112/253 (44%), Positives = 153/253 (60%), Gaps = 2/253 (0%)
Frame = +3
Query: 213 TGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTAT 392
T +V T A + +L+ +KPSAV QR I+P G +I Q+ GT T T
Sbjct: 42 TTKDIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVT 99
Query: 393 FSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 572
ILQ++D + ECQAL+L PT +LA + Q V+ LG L+AK HA GGT+ ED +
Sbjct: 100 LCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQ 159
Query: 573 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 752
L +GV V VGTP V M+ RAL + I++FVLDEADE+L RGFKDQIH + + L
Sbjct: 160 ILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTK 218
Query: 753 VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGI--KQFYIAIELXXWKLETLC 926
Q SA+M + LE+ R +M PV I+V ++E LEGI KQFY+ +E KL+ LC
Sbjct: 219 TQFGFFSASMSHEALEMCRKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLC 277
Query: 927 XLYDTLSIAQAVI 965
L+DT+ I +++I
Sbjct: 278 GLFDTMEITRSII 290
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 203 bits (495), Expect = 9e-51
Identities = 114/258 (44%), Positives = 153/258 (59%), Gaps = 4/258 (1%)
Frame = +3
Query: 210 PTGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAI--MPCIQGRXVIAQAQSGTGK 383
P + V FD M L ALL G Y+ GF PS +Q AI + R VIAQAQSGTGK
Sbjct: 84 PNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGK 143
Query: 384 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC-IGGTNVR 560
T FSI +L +ID S + QAL+LAPTRELA QI V +G + A IGG
Sbjct: 144 TGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRV 203
Query: 561 EDIR-QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 737
D + + S H+ + TPGR D+I L K+ VLDEAD+MLS F +Q++D+ +
Sbjct: 204 VDAQARAASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIME 263
Query: 738 MLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLE 917
DVQ++L SAT+ + + FM DP RIL++KE+LTLEGIKQFY+ ++ K +
Sbjct: 264 YFPEDVQILLFSATISQSIFHIMNTFMNDPFRILIKKEQLTLEGIKQFYVDVQETSNKFD 323
Query: 918 TLCXLYDTLSIAQAVISA 971
L +Y ++SI +A+I A
Sbjct: 324 CLLDIYGSVSIQKAIIFA 341
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 202 bits (494), Expect = 1e-50
Identities = 109/244 (44%), Positives = 146/244 (59%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ LK LL G + GFEKPS +Q+ AI I GR ++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ + + QALI+ PTRELA Q +VV LG H C GGTN+R+DI +L VH
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGRV D+ +R+ + LF++DEAD+MLSR FK I + L Q +L S
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 226
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT P V E + P I + EELTL+GI Q+Y +E KL L L+ L I
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFVE-ERQKLHCLNTLFSKLQIN 284
Query: 954 QAVI 965
QA+I
Sbjct: 285 QAII 288
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 194 bits (472), Expect = 6e-48
Identities = 98/255 (38%), Positives = 160/255 (62%)
Frame = +3
Query: 222 QVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSI 401
+V T+++M LK L+ G+EKPS +QQRAI QG+ ++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
L ++ + + + +I++PTRELA Q + + +LG A AC+GG ++ D++ L+
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVKALQ 132
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G+H V GTPGR+ ++ + A ++ VLDEADEML+ FK I D+ + L Q
Sbjct: 133 KGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTIMDILQKL-PHAQK 190
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
++++AT+ DV+E++ +R+ V I V ++ELTL GI Q+ + +E WK +TL +Y +
Sbjct: 191 VIVTATVSADVVELATAHLRNSVEIRVPRDELTLTGIDQYVVRVENEEWKFDTLIDIYQS 250
Query: 942 LSIAQAVISATPVAR 986
++I +AVI V +
Sbjct: 251 IAIEKAVIFVNSVEK 265
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 192 bits (468), Expect = 2e-47
Identities = 103/237 (43%), Positives = 146/237 (61%), Gaps = 3/237 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD + LK +LL GFE+PS +Q +I ++G +I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 417 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
D S ++ +ALILAPTRELA Q+ + ++ LG H GG + IR L++GV
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VVGTPGRV D+I R++L N I VLDEADEML+ GF D + ++ K L D Q +L
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 771 SATMPDDVLEVSRCFMR-DPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
SATMP + +++R +M+ D I ++K LT+ I+QFY I+ + ETLC + D
Sbjct: 186 SATMPPQIKKLARNYMKEDTKHIAIKKSSLTVSKIEQFYFEIKHRD-RFETLCRVLD 241
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 191 bits (466), Expect = 3e-47
Identities = 87/160 (54%), Positives = 121/160 (75%)
Frame = +3
Query: 486 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK 665
+KV++ LG+ L +AC GGT+ +ED ++L GV VVVGTPGRV D+I ++ L + +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 666 LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQ 845
LF+LDEADEML RGFKDQI+ +F+ L D+QV L SATM ++LE+++ FMRDP ILV+
Sbjct: 246 LFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATILVK 305
Query: 846 KEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
++LTL+GIKQFYIA++ WK +TL LY+ + IAQA+I
Sbjct: 306 NDDLTLDGIKQFYIALDKEEWKFDTLVELYNNIEIAQAII 345
Score = 98.3 bits (234), Expect = 4e-19
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GFEKPS +QQ I+P I+G+ IAQAQSGTGKTATFSI+ LQ IDTS QALILAPTR
Sbjct: 53 GFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTR 112
Query: 468 ELAQQ-IQKVVIALGDHL 518
ELAQQ I ++ LG +L
Sbjct: 113 ELAQQTITRIFFILGVNL 130
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 186 bits (454), Expect = 8e-46
Identities = 94/243 (38%), Positives = 144/243 (59%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L +L GFE+PS +Q +AI +QG+ VI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ R QAL+L PTRELA Q+ + + +G H K A GG ++ IR L GV
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VV+GTPGR+ D + R L + +++ VLDEADEML GF + I + + A+ Q +L S
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP ++ ++ +MRDP+ I V ++LT+ I Q++ + +K E L + D ++
Sbjct: 187 ATMPPEIRRLAGRYMRDPITISVTPQQLTVPQIDQYFCEVR-PSFKTEALTRILDIENVE 245
Query: 954 QAV 962
+ +
Sbjct: 246 RGI 248
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 184 bits (449), Expect = 3e-45
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 1/236 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + LL GFE+P+ +Q AI + G+ V QAQ+GTGKTA F I I++
Sbjct: 6 TFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIE 65
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 590
++D + QAL+L+PTRELA Q + L + I GG + +R L+ V
Sbjct: 66 RLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTV 125
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VV+GTPGRV D I R LH +++ +F+LDEAD+ML GF++ I D+F+ D Q IL
Sbjct: 126 QVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTILF 185
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
SATMP +L+++R F RDP + + ++ELT+ I+Q YI + KLE LC D
Sbjct: 186 SATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERD-KLEALCRTLD 240
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 184 bits (447), Expect = 6e-45
Identities = 101/244 (41%), Positives = 147/244 (60%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ L+ LL G Y GFE+PS +Q++AI + GR ++A+A++GTGKTA+F I L +
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 593
I+TS+ QALIL PTRELA Q +V LG H+ N + GGT +R+DI +L+ VH
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVH 157
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGR+ D+ ++ N +FV+DEAD++LS F I + + QV+L S
Sbjct: 158 ILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFS 217
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT P V E M P I + +ELTL+G+ Q+Y +E K+ L L+ L I
Sbjct: 218 ATFPWTVKEFKDQHMVQPYEINLM-DELTLKGVTQYYAYVE-ESQKVHCLNTLFSKLQIN 275
Query: 954 QAVI 965
Q++I
Sbjct: 276 QSII 279
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 182 bits (444), Expect = 1e-44
Identities = 90/244 (36%), Positives = 141/244 (57%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L +LL + GFE+ + +Q I +QG+ +I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++DT Q +++APTRELA Q+ + + +G H + GG ++ IR L+ H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGR+ D I R+ L ++ VLDEADEML+ GF + I + + Q +L S
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMPD + ++ FM +P I V+ +E+T+ I+QFY+ ++ K + L L D S
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPE 241
Query: 954 QAVI 965
A++
Sbjct: 242 LAIV 245
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 182 bits (442), Expect = 2e-44
Identities = 95/247 (38%), Positives = 142/247 (57%), Gaps = 1/247 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V +F + L+ LL GF +PS +Q AI ++GR VI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 584
LQ+ID + R QAL+L PTRELA Q+ + AL HL + + GG + L
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRR 123
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G VVVGTPGR+ D I R L +++ VLDEADEML GF++ I + + VQ
Sbjct: 124 GAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSA 183
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SATMPD +LE++R F+R+P + V + +LT+ +Q + + +++ +C ++D
Sbjct: 184 FFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVR-PFRRVDAVCRIFDAY 242
Query: 945 SIAQAVI 965
+A++
Sbjct: 243 IPRKAIV 249
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 181 bits (440), Expect = 4e-44
Identities = 92/249 (36%), Positives = 143/249 (57%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
++ + F+ + + + GFE+PS +Q +AI + G VI QAQ+GTGKTA F
Sbjct: 2 NEAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFG 61
Query: 399 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
I +++++ T R QALIL PTRELA Q+ + L H + GG ++ I+ L
Sbjct: 62 IPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKAL 120
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ GV VV+GTPGR+ D + R+ L + + +LDEADEML GF D I + + + + Q
Sbjct: 121 KQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQ 180
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
+L SATMP + ++SR +M DP + + + E+T I QFY + L KL++LC + D
Sbjct: 181 TLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFYYKV-LERNKLDSLCRIID 239
Query: 939 TLSIAQAVI 965
+ I ++
Sbjct: 240 SEQIDLGIL 248
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 178 bits (433), Expect = 3e-43
Identities = 94/256 (36%), Positives = 151/256 (58%), Gaps = 2/256 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V +F + LK ++ G + S +Q ++P ++GR +I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
Q+ SI Q LIL PTREL+ QI+ V L + +C GG + ED++ L+
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK I ++++ L++ VQ+I+
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIII 188
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLS 947
SAT+P L+ + F+ DPV IL++KEE+ ++ IKQFYI++ + KL L +++TL
Sbjct: 189 CSATIPLYTLQAASKFLLDPVMILMRKEEINIDKIKQFYISVFIEENKLLALLDIFETLL 248
Query: 948 IAQAVISATPV--ARW 989
+ Q +I + A W
Sbjct: 249 VGQVLIFCNTIRKANW 264
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 177 bits (432), Expect = 4e-43
Identities = 95/245 (38%), Positives = 140/245 (57%), Gaps = 1/245 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L + +LS G+E PS +Q + I ++GR V+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
++D RE Q L+LAPTRELAQQ+ + G + + + GG RE + L G
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGA 129
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
V+VGTPGRV D + R +L + + VLDEADEML GF D + V D Q +
Sbjct: 130 QVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVFF 189
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SAT+PD++ + ++ DP+RI ++ + T EGI+Q + IE KLE L L + +
Sbjct: 190 SATLPDEISRIVNHYLVDPLRIAIETKTKTAEGIEQRLVRIE-GGAKLEALSRLLEVEPV 248
Query: 951 AQAVI 965
A++
Sbjct: 249 DAAIV 253
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 175 bits (427), Expect = 2e-42
Identities = 88/244 (36%), Positives = 141/244 (57%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF L + L+ GFE+ + +Q + I + + VI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+I+ QA+++APTRELA Q+ + + +G AK GG ++ IR L+ +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGR+ D I RR + N + V+DEADEML+ GF D I + + ++ Q +L S
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP + ++ FM +P + V+ +E+T+ I+QFY+ ++ K +TL L D S
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQ-ERKKFDTLTRLLDIQSPE 242
Query: 954 QAVI 965
A++
Sbjct: 243 LAIV 246
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 175 bits (425), Expect = 3e-42
Identities = 96/220 (43%), Positives = 135/220 (61%), Gaps = 2/220 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
T++ LK LL G Y+ GFE PS +Q+ AI P I GR + AQAQSGTGKT F+++ LQ
Sbjct: 39 TWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQ 98
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
D S Q L+LA TRE+A Q LG + A+ GG+ + D LE H
Sbjct: 99 ICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPH 158
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADVQVIL 767
+VVGTPGRV MI L + IKLFV+DEADEML GF++Q+ +F+ ++ +VQ+ +
Sbjct: 159 IVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRITNKDEVQIAM 218
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 887
SAT ++ L VS + +PV I ++ + TL+GI+Q++I
Sbjct: 219 FSATYDEEELRVSEEILINPVIIDLRYNDQTLKGIRQYFI 258
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 174 bits (424), Expect = 4e-42
Identities = 92/236 (38%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSISIL 410
+F + L +L GF P+ +Q++AI I+G R ++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ ID S R QALILAPTRELA Q+ + + ++ GG ++ IR+L GV
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VVGTPGR+ D I+RR + + VLDEADEML+ GF D + ++ K +S + +++L
Sbjct: 123 QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLF 182
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
SAT+PD ++++++ +MR+ I V++++LT Q + I K E L + D
Sbjct: 183 SATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRD-KFELLSRIID 237
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 169 bits (412), Expect = 1e-40
Identities = 87/244 (35%), Positives = 138/244 (56%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L ++ GFE+ + +Q + I +Q + VI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+++ QAL++APTRELA Q+ + + +G + GG ++ IR L+ H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
V+VGTPGR+ D I R L + VLDEADEML+ GF + I + + A+ Q +L S
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMPD + ++ FM +P + V+ +E+T+ I+Q+Y+ + K + L L D +
Sbjct: 183 ATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQAPE 241
Query: 954 QAVI 965
A++
Sbjct: 242 LAIV 245
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 169 bits (410), Expect = 2e-40
Identities = 91/236 (38%), Positives = 138/236 (58%), Gaps = 1/236 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L +A+LS GF P+ +Q AI ++GR + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
++ S + QA+++APTRELA Q+ + LG ++ K GG ++ + +R L+SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGRV D+ITR LH + F+LDEADEML GF D + + + Q +L S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
ATMP V E+ F+R+P + V T+ ++Q Y ++ K E + L +T
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVK-GVEKDEAMARLLET 262
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 167 bits (407), Expect = 4e-40
Identities = 90/234 (38%), Positives = 133/234 (56%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F +M LK LL GFEKP+ +Q ++I + G ++ QAQ+GTGKTA+F I IL +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+ QAL+L PTRELA Q+ + + +L + + A GG ++ +R L +
Sbjct: 66 VIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGR+ D + R + + +K VLDEADEML GF I + + Q L SA
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSA 184
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
T+PD+V E+ FM+ P IL++ E T+ I+Q+Y + K+ETLC + D
Sbjct: 185 TLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRR-KIETLCRIID 237
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 165 bits (402), Expect = 2e-39
Identities = 84/222 (37%), Positives = 132/222 (59%), Gaps = 1/222 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+FD + L + G+E+P+ VQ P G+ VI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+I R AL++ PTRELA Q+ + AL H + A GG ++ E +++LE+G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGR+YD I RR L + + LDEADEML+ GF +++ + L D Q +L S
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFS 200
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ-FYIAIE 896
AT+P D+ ++ R ++ DP IL+ +E ++E I Y A++
Sbjct: 201 ATVPADIEQIIRDYLTDPETILLSGDEYSVENIHNVMYPAVD 242
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 165 bits (400), Expect = 3e-39
Identities = 82/197 (41%), Positives = 118/197 (59%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GF P+ +Q +AI + GR V+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTR
Sbjct: 22 GFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTR 81
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
ELA Q+ + + + A GG ++ + QL+ GVH+VVGTPGRV D++ R L
Sbjct: 82 ELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNL 141
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 827
+ +K FVLDEADEMLS GF D + + D Q L SATMP + + F+R P
Sbjct: 142 KLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSP 201
Query: 828 VRILVQKEELTLEGIKQ 878
V + V++ + T I Q
Sbjct: 202 VTVTVEQPKATPNKINQ 218
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 164 bits (399), Expect = 4e-39
Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 2/222 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+FD + L + GF PS +Q I + G+ VI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 414 QIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
Q+D+ R+ QA+++ PTRELA Q+ L + + GG N+ +RQLE+G
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENG 164
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
+VVGTPGRV+D + R L N + VLDEAD ML GF+ QI + + + Q +L
Sbjct: 165 TQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLL 224
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
LSAT+P V ++ +M +PV I ++E+ ++ I+Q Y I
Sbjct: 225 LSATLPPVVRRLAESYMHEPVVIDCCRDEMAVDTIEQRYFTI 266
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 163 bits (397), Expect = 7e-39
Identities = 79/221 (35%), Positives = 133/221 (60%), Gaps = 1/221 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L ++ + G+ + + +Q++ I + G+ + QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
+D SI + Q+LIL PTRELA Q+ + L + A GG ++ IR L++G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ D + RR L+A+ + +LDEADEML+ GF++ I + L + Q +L S
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFS 182
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
AT+ +L +++ F +P I ++++ELT+ ++QFY ++
Sbjct: 183 ATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVK 223
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 163 bits (397), Expect = 7e-39
Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 3/247 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L ++L G+EKPS +Q++AI P + GR V+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 414 QIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ I R ++LIL PTRELA QIQ+ A G HL + GG + + +L+
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
GV ++V TPGR+ D+ + + + +++FVLDEAD ML GF + V K+L A Q +
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SATMP +V+++ +++PV++ V +E I Q ++ K + L L + L
Sbjct: 182 FFSATMPPEVMDLVNGLLKNPVKVAVDPVSSPVEIIDQSVYLVDKGN-KTKLLAWLVEGL 240
Query: 945 SIAQAVI 965
+ A++
Sbjct: 241 DVKNAIV 247
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 163 bits (395), Expect = 1e-38
Identities = 84/223 (37%), Positives = 132/223 (59%)
Frame = +3
Query: 297 KPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 476
+P+ VQ +AI P + R V+AQAQ+GTGKT F + IL++++ QALI+ PTRELA
Sbjct: 25 EPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELA 84
Query: 477 QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHAN 656
QI L + A GG +V + +R+L+ +H+++GTPGR+ D + R+ ++
Sbjct: 85 IQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLG 144
Query: 657 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 836
+ + VLDEAD+ML GF + D+ + Q + SATMP+ V ++ +M+DPV+I
Sbjct: 145 KLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQI 204
Query: 837 LVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
VQ + +TL+ I+Q I K + LC L+D + A+I
Sbjct: 205 QVQSKRVTLDEIRQVVIE-TTDRGKQDLLCQLFDEYNPFMAII 246
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 163 bits (395), Expect = 1e-38
Identities = 91/251 (36%), Positives = 152/251 (60%), Gaps = 5/251 (1%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG--RXVIAQAQSGTGKTATFSI 401
V +F + L L+ G A GF+KPS +Q++A+ + R +I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
++L ++D +I QA+ +AP+RELA+QIQ+V+ +G I G+ R +++
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNS--RID 264
Query: 582 SGVHVVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSAD 752
+++GTPG + DM+ R R L I++ VLDEADE+++ +G +Q + ++L +
Sbjct: 265 K--QILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPN 322
Query: 753 VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXL 932
VQ +L SAT DDV E + F + +I ++KE++T++ I+Q Y+ + K E L L
Sbjct: 323 VQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDITVDAIRQLYLECDSEDQKYEALSAL 382
Query: 933 YDTLSIAQAVI 965
YD L I Q+++
Sbjct: 383 YDCLVIGQSIV 393
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 162 bits (394), Expect = 2e-38
Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 1/246 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD ALL G+ PS +Q+ A + GR ++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 593
+++ + Q L+LAPTRELA Q+ A H + K A GGT+ R I L GV
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVVGTPGRV D + + L + + VLDEADEML GF D + + + L + QV+L S
Sbjct: 193 VVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFS 252
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP ++ +S+ ++ DP + ++ ++ + I+Q I + + KLE L + D
Sbjct: 253 ATMPPEIRRLSKRYLNDPAEVTIKTKDQDGKLIRQRAITVPMSH-KLEALQRVLDACGGE 311
Query: 954 QAVISA 971
+I A
Sbjct: 312 GVIIFA 317
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 162 bits (393), Expect = 2e-38
Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 2/236 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQ-GRXVIAQAQSGTGKTATFSISILQ 413
F+ L +L G+EKP+ +Q+ + + + +IAQAQ+GTGKTA F I +L+
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 414 QIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ID + +A+I+ PTRELA QI + + +L K GG ++ + + LE GV
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGV 139
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VVGTPGR+ D + R L + ++ VLDEAD ML GF D + ++ K + + L
Sbjct: 140 DIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLF 199
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
SATMP ++++++R FM++ + + K+ELT E +Q Y ++ KL LC + D
Sbjct: 200 SATMPKEIVDIARKFMKEYIHVSTVKDELTTENAEQLYFEVDEKD-KLPLLCRIID 254
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 162 bits (393), Expect = 2e-38
Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 3/221 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCI-QGRXVIAQAQSGTGKTATFSISIL 410
TFD + L A LL GFE PS +Q+ AI + + R ++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESG 587
Q ID S + Q LI+APTREL QI + H+ + A GG+N++E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
+VV TPGR+ DM+ RR + + VLDEADEML+ GF + I ++ D L
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPEDKLTWL 181
Query: 768 LSATMPDDVLEVSRCFMRDPVRILV-QKEELTLEGIKQFYI 887
SATMP +V +++ FM DP+ I V K E ++Y+
Sbjct: 182 FSATMPREVARIAKEFMHDPLEITVGHKNEGAKNVSHEYYV 222
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 161 bits (390), Expect = 5e-38
Identities = 85/238 (35%), Positives = 136/238 (57%), Gaps = 1/238 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
+ +F + L+A LL G+E PS +Q I + G ++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 584
L ++D +++ Q L+LAPTRELA Q+ + +L GG ++ +RQL
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G HV+VGTPGRV D I R++L+ +++ VLDEADEML GF D + + + A+ Q
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTA 222
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
L SATMPD + V+ ++R+P + ++ T+ +Q Y I + KL+ L + +
Sbjct: 223 LFSATMPDAIRRVAHRYLREPREVKIKASTTTVSTTRQRYCQISVAH-KLDALTRILE 279
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 161 bits (390), Expect = 5e-38
Identities = 87/217 (40%), Positives = 124/217 (57%), Gaps = 1/217 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L LL G+E+PS +Q+++I ++G+ V+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVH 593
+RE Q L+LAPTRELAQQ+ V + H N K + GG++ R L+ G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVGTPGRV D I R L I+ VLDEADEML GF D + V + Q+ L S
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFS 187
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
ATMP + V+ +R+P I ++ + T E I+Q Y
Sbjct: 188 ATMPKQIKAVAEKHLREPTEIRIKSKTATNESIEQKY 224
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 161 bits (390), Expect = 5e-38
Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 1/223 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
+ +F + L ++ G+E+P+ +QQ I + G V QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 584
++ + R Q ++L P+RELA Q+ + L H GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
GV +++GTPGRV D I R+ L + + L VLDEAD+ML GF++ I ++ + + Q +
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTV 182
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+LSAT P ++L++SR F ++P+ + + +ELT+ I+Q+YI +
Sbjct: 183 ILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEV 225
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 160 bits (389), Expect = 6e-38
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 1/218 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + LKA +L G+EKPS +Q I + GR V+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
+D ++ Q L+LAPTRELA Q+ + + H+ A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VVGTPGR+ D + R L + + VLDEADEML GF + + + + Q L
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALF 186
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
SATMP+ + ++R FM++P + +Q T I Q Y
Sbjct: 187 SATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSY 224
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 160 bits (389), Expect = 6e-38
Identities = 87/218 (39%), Positives = 132/218 (60%), Gaps = 2/218 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+++ L +L G A GFE+PS VQ +AI G +I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 182
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILL 770
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++ +
Sbjct: 183 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 242
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
SAT P+ + +MRDP + + + +L G+KQ+Y
Sbjct: 243 SATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 280
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 160 bits (388), Expect = 8e-38
Identities = 87/218 (39%), Positives = 132/218 (60%), Gaps = 2/218 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+++ L +L G A GFE+PS VQ +AI G +I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 183
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILL 770
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++ +
Sbjct: 184 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 243
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
SAT P+ + +MRDP + + + +L G+KQ+Y
Sbjct: 244 SATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 160 bits (388), Expect = 8e-38
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
+Q + F AL F PS +Q + I +QGR IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 399 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQ 575
+ ILQ + I QALILAPTRELA Q+ + L + N GG ++Q
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQ 121
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L SG VVVGTPGR+ D I + L N +K F+LDEADEML GF + + + + L
Sbjct: 122 LRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKK 181
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 887
Q+ L SATMP + +++ ++ DP I ++ E T++ I+Q ++
Sbjct: 182 QMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFL 225
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 159 bits (387), Expect = 1e-37
Identities = 86/218 (39%), Positives = 127/218 (58%), Gaps = 1/218 (0%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GFE+ S +Q AI + + V QAQ+GTGKTA F I +L+ ID+ QA+IL PTR
Sbjct: 23 GFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTR 82
Query: 468 ELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRA 644
ELA Q+ + + L +L GG + I+ L+ GV +++GTPGRV D I R
Sbjct: 83 ELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGT 142
Query: 645 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 824
L N IK +LDEADEML GF++ I + + + + Q +L SAT+P ++L++++ + +
Sbjct: 143 LSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTN 202
Query: 825 PVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
P + V K ELT ++Q Y ++ KLE L L D
Sbjct: 203 PEIVKVTKHELTTPDVEQKYFEVK-EDMKLELLSRLLD 239
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 159 bits (385), Expect = 2e-37
Identities = 86/246 (34%), Positives = 135/246 (54%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F LK+ L++ GF +P+ +Q++AI + G +I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
ID S + QAL+LAPTRELAQQ+ + GG++ + + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVVGTPGR+ D+I + +L + +K VLDEADEMLS GF D I + D Q +L S
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFS 235
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT+ V+ ++ ++ P I + +++ I+Q Y I K+ + +++ ++
Sbjct: 236 ATLSSRVMSIANRYLHSPESISISPKQMIGSSIEQRYYLINNSD-KIAAITRVFEVETVE 294
Query: 954 QAVISA 971
A+I A
Sbjct: 295 SALIFA 300
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 159 bits (385), Expect = 2e-37
Identities = 97/252 (38%), Positives = 144/252 (57%), Gaps = 6/252 (2%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG--RXVIAQAQSGTGKTATFSI 401
+ +F + L ++ G A F+KPS +Q RA+ + R +IAQ+QSGTGKT F +
Sbjct: 95 ISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVV 154
Query: 402 SILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
+IL ++D + QAL LAP+RELA+QIQ V+ ++G C + + I +
Sbjct: 155 TILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF----CTGLVVDAAIPGAISR- 209
Query: 579 ESGV--HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSA 749
E+GV +VVVGTPG V D+I RR + +KL V+DEAD ML + G +Q V ML
Sbjct: 210 ETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPK 269
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCX 929
+Q +L SAT PD V + F ++ ++++ELT++GI Q Y+ K E LC
Sbjct: 270 TIQTLLFSATFPDHVKSYAEKFAPQANQMKLRQQELTVKGISQMYMDCPSLKEKYEVLCK 329
Query: 930 LYDTLSIAQAVI 965
LY ++I +VI
Sbjct: 330 LYGLMTIGSSVI 341
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 158 bits (383), Expect = 3e-37
Identities = 101/255 (39%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK LL GFE PS VQ I I G VI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVR--EDIRQLESG 587
I+ S + AL+L TRELA QI + +L + K GG N++ +D+ + E
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC- 166
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVI 764
H+VVGTPGRV + + L ++ F+LDE D+ML S + + ++FKM D QV+
Sbjct: 167 PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
+ SAT+ ++ V + FM+DP+ I V E +LTL G+ Q YI + K L L D
Sbjct: 227 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLS-EMEKTRKLNDLLDA 285
Query: 942 LSIAQAVISATPVAR 986
L Q VI V+R
Sbjct: 286 LDFNQVVIFVKSVSR 300
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 157 bits (382), Expect = 4e-37
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 1/216 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L LLS + GF + +Q I P + G+ V+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 593
IDTSI++ Q ++LAPTRELA Q+ + + + G D + GG + +QLE G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVVGTPGR+ D + R++L + +++ VLDEADEML+ GF + I + + Q+ L S
Sbjct: 137 VVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFS 196
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 881
ATMP + +++ F++DP I V + I Q+
Sbjct: 197 ATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQY 232
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 157 bits (381), Expect = 6e-37
Identities = 85/210 (40%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L LL+ GFE + +QQ +I + G+ +I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 593
I+ QALIL PTRELA Q+ + LG L K A GG + RE LE+GV
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ D + R + + +K VLDEAD+ML GF D+I V + L Q +L S
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFS 228
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTL 863
AT P+ + +SR + R +++++ EE L
Sbjct: 229 ATFPESIEHLSRKYQRHAQQVIIEDEEQNL 258
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 157 bits (381), Expect = 6e-37
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 2/218 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F A+ L AL G A G+ + VQ +++ P ++G VIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES-GV 590
+D ++ QAL+L PTRELA Q+ K + L + N K GG + + LE+
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
HVVVGTPGR+ ++ +RALH ++ VLDEAD ML GF++ I ++ Q +L
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
SAT PD + ++R ++DP+ I V+ + E +QF+
Sbjct: 208 SATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFF 245
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 157 bits (381), Expect = 6e-37
Identities = 93/254 (36%), Positives = 138/254 (54%), Gaps = 4/254 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK LL GFE PS VQ I I G V+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 590
++ + L++ TRELA QI K ++ N K GG ++++D L+
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVIL 767
H+VVGTPGR+ + ++L+ IK F+LDE D+ML + + + ++F+M + QV++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SAT+ ++ V R FM+DP+ I V E +LTL G++Q+Y+ ++ K L L D L
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLK-DNEKNRKLFDLLDVL 285
Query: 945 SIAQAVISATPVAR 986
Q VI V R
Sbjct: 286 EFNQVVIFVKSVQR 299
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 157 bits (380), Expect = 8e-37
Identities = 82/225 (36%), Positives = 130/225 (57%), Gaps = 5/225 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L ++L+ G+ KP+ +Q +AI ++G+ + AQ+GTGKTA F++ +
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 414 QIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
+ T+ R C+ LIL+PTRELA QI + HL +A GG + +R L
Sbjct: 67 YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRML 126
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ G ++V TPGR+ D+I +RAL +++FVLDEAD+ML GF + + K+L + Q
Sbjct: 127 DRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQ 186
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+ SATMP + E+S F+ DPV + V + T E ++QF I +
Sbjct: 187 TLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFGIFV 231
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 157 bits (380), Expect = 8e-37
Identities = 88/243 (36%), Positives = 132/243 (54%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L LL GFE P+ +Q+ AI ++G ++ QA +GTGKTA + + +LQ+
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
I ++ Q LI+ PTRELA Q+ V LG +L + A GG + IR L GV V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGR+ D I R+ A IK+ +LDEADEML GF D I + L+ Q +L SA
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSA 182
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
T+P + + + F+ + + E T+ I+Q Y + K+E L + ++ Q
Sbjct: 183 TLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELP-ETEKIEGLVSILNSELPIQ 241
Query: 957 AVI 965
A++
Sbjct: 242 AIV 244
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 157 bits (380), Expect = 8e-37
Identities = 91/244 (37%), Positives = 138/244 (56%), Gaps = 3/244 (1%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
S+ F + L ++ G+E P+ +QQ AI + GR V+ QAQ+GTGKTA F+
Sbjct: 3 SETKKDFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFA 62
Query: 399 ISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDI 569
+ ++ +D + R+ Q L+LAPTRELA Q+ + A ++ ACI GG I
Sbjct: 63 LPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQI 122
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
R L+ GV VVVGT GRV D I + L + ++ VLDEADEML GF D + V +S
Sbjct: 123 RALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSD 182
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCX 929
+ Q +L SAT+P D+ ++ ++R+P +I V+ + T + Q +I I+ K++ L
Sbjct: 183 ECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIK-GFRKIDALDR 241
Query: 930 LYDT 941
L +T
Sbjct: 242 LLET 245
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 156 bits (379), Expect = 1e-36
Identities = 88/244 (36%), Positives = 138/244 (56%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ + L +L+ + G+E PS +Q++ I + + +I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
I+ +I Q LILAPTRELA Q+ + V + GG + +R L+ GVH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VGTPGRV D I ++ L + +K FVLDEADEML GF D I + + + Q+ L S
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFS 193
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP+ + ++++ F+ P I ++ + T I Q Y + KLE L + + +++
Sbjct: 194 ATMPNVIKKIAKQFLNQPKIIKIKTKTETATTITQKYCMVGGLSNKLEALTRILE-VTVF 252
Query: 954 QAVI 965
A+I
Sbjct: 253 DAMI 256
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 156 bits (378), Expect = 1e-36
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 1/217 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+++ L L + G+E + +Q I ++GR V+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
ID +R QAL+L PTRELAQQ+ + + G + + + GG ++R+ ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VV TPGR+ D I RR++ I VLDEADEML GF D + + + +V L S
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFS 190
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
ATMP V +++ + +P I V T E I+Q Y
Sbjct: 191 ATMPKRVRDIANKHLSNPAEISVAAAATTNENIEQCY 227
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 156 bits (378), Expect = 1e-36
Identities = 89/255 (34%), Positives = 148/255 (58%), Gaps = 12/255 (4%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L +L G A GF++PS +Q +AI G +I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
+ Q L+LAPTRE+A QI VV+A+G + +CH IGG + +D + L+ H
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-CH 146
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADVQV 761
+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F++QI+ ++ L A+ Q+
Sbjct: 147 IAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQM 206
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI-------ELXXWKLET 920
+ LSAT P+ + + +MR+P + + + L G+KQ+Y + ++ K+++
Sbjct: 207 LALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQS 266
Query: 921 LCXLYDTLSIAQAVI 965
L L+ + QA++
Sbjct: 267 LLELFSKIPFNQALV 281
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 155 bits (376), Expect = 2e-36
Identities = 87/244 (35%), Positives = 134/244 (54%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L A + + GFE+ S +Q AI ++G+ +I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 593
++ + QALIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+V+ TPGR+ D + R ++H + IK+ VLDEADEML GF++ + + K AD Q I+ S
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFS 190
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATM DDVL + + F P I V ++L+ I+Q Y I+ K E L L + ++
Sbjct: 191 ATMTDDVLTLMKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQ-ENAKGEALARLIEYRNVK 249
Query: 954 QAVI 965
A++
Sbjct: 250 LALV 253
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 155 bits (375), Expect = 3e-36
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 1/217 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L A++ G+E PS +Q I + GR V+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
+ + Q L+LAPTRELA Q+ + ++ + GG + + + L+ GVH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
V+VGTPGRV D + R L + +K VLDEADEML GF + + +V + L A QV L S
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFS 196
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
ATMP + +++ +++DP+ + + + T I+Q Y
Sbjct: 197 ATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRY 233
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 155 bits (375), Expect = 3e-36
Identities = 93/251 (37%), Positives = 145/251 (57%), Gaps = 5/251 (1%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAI--MPCIQGRXVIAQAQSGTGKTATFSI 401
V TF+ + LK LL G YA GF +PS +Q+ A+ M + +IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQL 578
++L +++ Q L LAPT ELA Q +VV +G ++ + I G + R
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIP---RGT 212
Query: 579 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSAD 752
+ +++GTPG V D + + + I++FVLDEAD M+ ++GF D + + L ++
Sbjct: 213 DITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSE 272
Query: 753 VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXL 932
Q++L SAT D V + + DP I ++KEELTL I+Q+Y+ E K + LC +
Sbjct: 273 CQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNI 332
Query: 933 YDTLSIAQAVI 965
Y +++I QA+I
Sbjct: 333 YGSITIGQAII 343
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 154 bits (374), Expect = 4e-36
Identities = 83/243 (34%), Positives = 135/243 (55%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ L+ L+ G+ +P+ VQ AI + G ++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+ +ALIL PTRELA Q+ KV ALG + GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGR D+I R L+ + + FVLDEADEML GF + I + +L + Q L SA
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSA 182
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
T+P +++E+++ FM + + + K+E+T+ GI Y A+ KL TL D +
Sbjct: 183 TIPSEIIELAKGFMHNEEILFLSKDEVTVNGIDHNY-AVSRRERKLRTLFSYIDKYKPEK 241
Query: 957 AVI 965
++I
Sbjct: 242 SII 244
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 154 bits (374), Expect = 4e-36
Identities = 91/254 (35%), Positives = 136/254 (53%), Gaps = 4/254 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK LL GFE PS VQ I I G V+ QA+SG GKTA F ++ LQQ
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 590
I+ + L++ TRELA QI K ++ + K GG ++++D L+
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVIL 767
HVVVGTPGR+ ++ R+ +K FVLDE D+ML + + + ++F++ + Q ++
Sbjct: 166 HVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMM 225
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SAT+ D+ V R FM+DP+ + V E +LTL G++Q+Y+ ++ K L L D L
Sbjct: 226 FSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLK-DSEKNRKLFDLLDVL 284
Query: 945 SIAQAVISATPVAR 986
Q +I V R
Sbjct: 285 EFNQVIIFVKSVQR 298
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 153 bits (372), Expect = 7e-36
Identities = 85/243 (34%), Positives = 137/243 (56%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD LK +L G GF PS VQ ++I +QG+ +IAQAQ+GTGKTA F+I IL
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
++ + ++ +ALI+ PTRELA QI + ++ LG K GG +++ LE
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKA 165
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
++ TPGR+ D + + + ++ VLDE+DEML GF D I ++FK L Q +L SA
Sbjct: 166 MIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSA 225
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
TMP+ + ++ + +P + + ++T + I+Q Y I + E + L +T + +
Sbjct: 226 TMPEPIKALAMKILNEPAFVKITPTDVTNQDIEQQYYIIN-EGERDEAIVRLIETQNPTK 284
Query: 957 AVI 965
++I
Sbjct: 285 SII 287
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 153 bits (372), Expect = 7e-36
Identities = 87/244 (35%), Positives = 134/244 (54%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ + L AL G+ + +Q++AI + + +I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVH 593
++T +++ QA+IL PT ELA QI + V +L I GG++++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-N 121
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++VGTPGR+ D I R+ L + IK VLDEADEML GFK + VF+ Q +L S
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFS 181
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP VLE++ + +PV I+V K + I Q Y+ + K + L LY L
Sbjct: 182 ATMPKQVLEIANNYQTNPVEIVVTKNVIEQNNISQHYVN-AISYHKEDVLIALYKHLQPK 240
Query: 954 QAVI 965
+++I
Sbjct: 241 RSII 244
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 153 bits (371), Expect = 1e-35
Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 1/216 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L LL + G+E P+ +Q +AI+ + G V+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
+IDT+ + QAL+L PTRELA Q+ + + N GG ++R +R L+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
V+VGTPGRV D + R L + +K VLDEADEML GF + I + + D Q L
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALF 185
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
SATMP + ++ + +DPV+I ++ L+ I+Q
Sbjct: 186 SATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQ 221
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 153 bits (371), Expect = 1e-35
Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 2/219 (0%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQID- 422
M L + + A + +PS +Q I ++GR V+ QA++GTGKTA F I I+++++
Sbjct: 9 MALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEH 68
Query: 423 -TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 599
+ R QALIL PTRELA Q++ + L A GG +R + +L+ H+V
Sbjct: 69 GPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIV 128
Query: 600 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 779
VGTPGRV D++TRRAL ++ VLDEAD ML GF+ I + + + Q +LLSAT
Sbjct: 129 VGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSAT 188
Query: 780 MPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+P + ++++ +MR+P ++ ++ E I+Q Y ++
Sbjct: 189 VPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVD 227
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 153 bits (371), Expect = 1e-35
Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK +L GFE PS VQ I + G ++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 417 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
++ S C L++ TRELA QI K ++ K GG +++D L+SG
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 591 -HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVI 764
H+VVGTPGR+ +I + L+ +K FVLDE D+ML + + + ++F+ QV+
Sbjct: 163 PHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVM 222
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
+ SAT+ D+ V + FM+DP+ + V E +LTL G++Q Y+ ++ K + L L D
Sbjct: 223 MFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLK-ENEKNKKLFELLDV 281
Query: 942 LSIAQAVISATPVAR 986
L Q VI V R
Sbjct: 282 LEFNQVVIFVKSVQR 296
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 153 bits (370), Expect = 1e-35
Identities = 76/132 (57%), Positives = 100/132 (75%)
Frame = +3
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
R+L + + VV + RV+D++ RRA+ A I+L VLDEAD+ML GFKDQIH++F L
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPT 156
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCX 929
+VQ ILLSATMP VLE ++ FM+DPV+IL+++EELT+EGI+QFYI E KLE+LC
Sbjct: 157 NVQAILLSATMPAHVLEATKMFMQDPVKILIKREELTMEGIQQFYIKTETEEKKLESLCG 216
Query: 930 LYDTLSIAQAVI 965
LY TL+I QAVI
Sbjct: 217 LYSTLTITQAVI 228
Score = 119 bits (286), Expect = 2e-25
Identities = 59/95 (62%), Positives = 74/95 (77%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
S V +F+ M L LL G +A GFEKPSA+QQ+AI+PCI+G VIAQ+QSGTGKTAT+
Sbjct: 17 SYSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYV 76
Query: 399 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 503
I+ LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 77 IAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 153 bits (370), Expect = 1e-35
Identities = 82/233 (35%), Positives = 134/233 (57%), Gaps = 3/233 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSISIL 410
TF + L AALL PS +QQ+AI + + V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESG 587
QQI+ S+++ Q L+L PTREL QQ+ K + ++ A GG + E I++LE+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
H++V TPGR+ D+I R+A++ + +K +LDEADEML+ GF I + K+ + +L
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
Query: 768 LSATMPDDVLEVSRCFM-RDPVRILVQKEELTLEGIKQFYIAIELXXWKLETL 923
++T+ ++ + R ++ D I ++ +E I+ Y+A + +KLE L
Sbjct: 182 FTSTLGSELKLIIREYLGTDIEEIRIKPQEYVNRNIEHQYLAYQ-YGYKLEYL 233
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 153 bits (370), Expect = 1e-35
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 3/247 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG--RXVIAQAQSGTGKTATFSISI 407
+FD + L LL G YA F+KPS +Q+RA+ + R +IAQ+QSGTGKTA FS+++
Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
L +++ QA+ LAP+RELA+Q +VV +G + + E +Q+ +
Sbjct: 153 LTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIV--PDSFEKNKQINA- 209
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVI 764
V+VGTPG V D++ R+ + IK+FVLDEAD ML +G DQ V + L D Q++
Sbjct: 210 -QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLV 268
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
L SAT D V + ++ + + + +Q E+ ++ IKQ Y+ + K + L LY +
Sbjct: 269 LFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLM 328
Query: 945 SIAQAVI 965
+I ++I
Sbjct: 329 TIGSSII 335
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 152 bits (369), Expect = 2e-35
Identities = 81/220 (36%), Positives = 122/220 (55%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F L LL FE P+ VQQ+ I ++ + +I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+D + QAL+L PTRELA Q+++ + +G K A G ++L+ HV
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHV 125
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
VVGTPGR+ D + + + IK V+DEADEM + GF DQI + K LS +LLSA
Sbjct: 126 VVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSA 185
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
TMP + +S +M+DP+ +++E ++ I Q +E
Sbjct: 186 TMPSAIETLSNRYMKDPIHAEIEEESSAVDRISQERYTVE 225
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 152 bits (369), Expect = 2e-35
Identities = 83/245 (33%), Positives = 132/245 (53%), Gaps = 1/245 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L A+L A G+E PS +Q ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
+ID ++ E Q L+LAPTRELA Q+ + N GG + IR L+ G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
V+VGTPGR+ D + + L + +K VLDEADEML GF D + + Q L
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SATMP + +V++ ++++ + ++ E T+E I QF + + KL+ L + +
Sbjct: 205 SATMPPQIKKVAQTYLKNATEVRIESETRTVERIAQFVLPVYAER-KLDALTRILEVEPF 263
Query: 951 AQAVI 965
++I
Sbjct: 264 DASII 268
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 152 bits (369), Expect = 2e-35
Identities = 79/220 (35%), Positives = 121/220 (55%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + + A +L GF+ P+ VQ +AI + +I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+ Q LIL P RELA Q+ + + +L K A G N+ + + L GV
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+V GTPGRV+D I+ L I+ VLDEAD ML GF DQ+ + K L + +L S
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFS 183
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
ATMP ++ + + +M +PV I ++ + T++ I Q Y +
Sbjct: 184 ATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRV 223
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 152 bits (368), Expect = 2e-35
Identities = 78/223 (34%), Positives = 131/223 (58%), Gaps = 1/223 (0%)
Frame = +3
Query: 213 TGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTAT 392
+ +Q +F+ M L +A+L A F P+ +Q +AI ++G+ V+ +AQ+GTGKTA
Sbjct: 2 SNTQTGLSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAA 61
Query: 393 FSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDI 569
F + L +ID S+++ Q L++ PTRELA Q+ + + + A + GG +
Sbjct: 62 FGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQV 121
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
+ L+ G +VVGTPGR+ D++ + L + +K+ VLDEADEML+ GF + I + K +
Sbjct: 122 KALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPN 181
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
Q L SATMP+ + ++++ F++DP+ I ++ IKQ
Sbjct: 182 TAQRALFSATMPNAIRKLAKTFLKDPLNIQIEAIAREKATIKQ 224
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 152 bits (368), Expect = 2e-35
Identities = 84/221 (38%), Positives = 121/221 (54%), Gaps = 1/221 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF ++ L +L+ GF P+ +Q AI P ++ R V+ AQ+GTGKTA F + +L
Sbjct: 46 TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLA 105
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
+D R QAL+LAPTRELA Q + + GG+ I L+ G
Sbjct: 106 IVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGA 165
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VVVGTPGRV D+I + AL + +++ VLDEADEML GF + + + D L
Sbjct: 166 QVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALF 225
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SATMP + +V+R ++DPV++ V E T++ I Q Y +
Sbjct: 226 SATMPAAIEKVAREHLKDPVKVAVSTESSTVDTIHQTYAVV 266
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 152 bits (368), Expect = 2e-35
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 4/238 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX-VIAQAQSGTGKTATFSISILQ 413
F M L +LS G+E P+ +Q++ I + G+ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++D + QAL+L PTRELA Q+ + +L + GG ++ IR L+ V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ D + R L IK V+DEADEML GF + + + + + Q+++ S
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFS 183
Query: 774 ATMPDDVLEVSRCFM---RDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
ATMP ++ ++R M + KE++T++ KQ Y I K+E L L D
Sbjct: 184 ATMPQRIVTLARKHMGNFETVTTVQENKEDITVKKAKQIYYMISESN-KIELLSRLID 240
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 152 bits (368), Expect = 2e-35
Identities = 80/234 (34%), Positives = 135/234 (57%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L +++ + GFE+ + +Q++AI ++G+ +I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
I + + Q L++ PTRELA Q+ + + +G + A GG + R ++ LE H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
VVGTPGR+ + + R + + I++ VLDEAD+ML GF D+ + K L Q +L SA
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSA 183
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
T+ V ++R +++DP I ++E +T+ Q+YI + K E L L D
Sbjct: 184 TLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMP-EKQKFEALTRLLD 236
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 151 bits (365), Expect = 5e-35
Identities = 81/250 (32%), Positives = 136/250 (54%), Gaps = 6/250 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+++ L L+ A G+E+P+ +Q+ A+ P ++G+ ++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 414 QIDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+I AL+L PTRELA Q+ + + G L GG + + +R L+
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKR 156
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
GV VVV TPGR D + R+ L +++ VLDEADEML GF + + + Q
Sbjct: 157 GVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSSTPEKRQTA 216
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEEL---TLEGIKQFYIAIELXXWKLETLCXLY 935
L SAT+P + ++ +R+PVR+ + +E++ L ++Q + +K+ TL +
Sbjct: 217 LFSATLPPRIASIAERHLREPVRVRIAREKVESGELPRVRQTAYIVP-RAFKVATLSRVL 275
Query: 936 DTLSIAQAVI 965
D + A++
Sbjct: 276 DVEAPTAAIV 285
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 150 bits (364), Expect = 7e-35
Identities = 79/212 (37%), Positives = 120/212 (56%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD M L + G+ P+ VQ RA P I+G+ +I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
I R +ALIL PTRELA Q+ + L H K A GG ++++ LE G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGRV+D I R L + VLDEADEML++GF +++ + L QV+L SA
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFSA 210
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGI 872
T+P D+ + + + +L+ + T+E I
Sbjct: 211 TVPTDIQNLIARYTTNAETLLLSGDVFTVEHI 242
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 150 bits (364), Expect = 7e-35
Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 1/226 (0%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
+Q F A+ + A+L+ A G+E+PS +Q +AI + G +I QAQ+GTGKTA F+
Sbjct: 19 TQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFA 78
Query: 399 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQ 575
+ +L +ID + RE Q LILAPTRELA Q+ L A GG + ++
Sbjct: 79 LPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKA 138
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L G ++V TPGR+ D + R +T+K VLDEADEML GF + + +F L
Sbjct: 139 LRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESR 198
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
Q +L SAT+P + E++ + +P + + + T+ I Q ++ +
Sbjct: 199 QTVLFSATLPHSIREIAEKHLHEPQHVKIAAKTQTVARIDQAHLMV 244
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 150 bits (364), Expect = 7e-35
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V F + L+ LL A G+E+P+ +Q+ A+ P + GR ++ QA +GTGKTA F++ +
Sbjct: 56 VAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPL 115
Query: 408 LQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
L ++ T QAL+L PTRELA Q+ + + G L A+ GG + +R L
Sbjct: 116 LHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRAL 175
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
GV VVV TPGR D + R L + + VLDEADEML GF + I + + Q
Sbjct: 176 VQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQ 235
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILV 842
+L SAT+P + +++R +RDPVRI +
Sbjct: 236 TVLFSATLPPRMDQIARRHLRDPVRIQI 263
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 150 bits (364), Expect = 7e-35
Identities = 90/246 (36%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L LL G+E PS +Q I + R V+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 593
ID QAL+LAPTRELA Q+ + ++ GG + + L GVH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVVGTPGRV D + + +L + IK VLDEADEML GF D + + + Q L S
Sbjct: 129 VVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFS 188
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
ATMP + ++ ++RDP I V + T + I+Q Y + KL+ L + + +
Sbjct: 189 ATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVS-GMQKLDALTRILEAENFD 247
Query: 954 QAVISA 971
+I A
Sbjct: 248 GMIIFA 253
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 150 bits (364), Expect = 7e-35
Identities = 77/225 (34%), Positives = 128/225 (56%), Gaps = 5/225 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATF---SISI 407
F + L +L G+ P+ +Q++AI P ++GR ++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 408 LQQIDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
L++ D I + C+ L+LAPTREL QI G K + +GGT+V +D +L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G +++ TPGR+ D+I ++A + ++++ VLDEAD+ML GF + + +++ + Q
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQT 183
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+ SATMP + E+ + +PV++ V E T E I Q+ ++
Sbjct: 184 LFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQ 228
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 150 bits (363), Expect = 9e-35
Identities = 78/212 (36%), Positives = 130/212 (61%), Gaps = 1/212 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ LK LL G + G+E PS++Q+ +I + GR ++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGVH 593
+D QA+++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+ +L+ H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VV+ TPGR+ D+I + + +++ VLDEAD++LS+ F + L + Q++L S
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILLYS 262
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEG 869
AT P V + ++ P I + EELTL+G
Sbjct: 263 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKG 293
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 150 bits (363), Expect = 9e-35
Identities = 83/249 (33%), Positives = 137/249 (55%), Gaps = 2/249 (0%)
Frame = +3
Query: 225 VVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSIS 404
++ +FD + L L+ G G KP+ +Q + I ++ + VI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 578
I Q+IDTS RE QA+ILAPT ELA QI K + L + ++ IG NV+ I +L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L I DV K D Q
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIKTTMRDRQ 180
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
+++ SAT+ + L V++ M+D I + E I Y + K+E L L
Sbjct: 181 LMVFSATINEKTLNVAKGLMKDAEFIKAKSENAINPNITHMYFISDQRD-KIEVLRKLVA 239
Query: 939 TLSIAQAVI 965
+++ +A++
Sbjct: 240 SINPEKAIV 248
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 150 bits (363), Expect = 9e-35
Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 2/236 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQ-GRXVIAQAQSGTGKTATFSISILQ 413
F+ + L LL+G GFE P+ +QQ++I ++ I AQ+GTGKTA F + +L
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
ID + RE QALILAPTRELAQQI + + HL GG N+ IR + G
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++V TPGR+ D++ RR + + +K VLDEADEML+ GFK+ I + + L
Sbjct: 135 QIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNIWLF 194
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
SATM ++ + +M P + + + + + I+ I ++ K+E L D
Sbjct: 195 SATMAREIKRIVDTYMVQPEEVRINPKNIVNKNIEHQSIQLKASD-KIEALRRFLD 249
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 150 bits (363), Expect = 9e-35
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 5/207 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD + L L++G A P+ +Q RAI + GR V+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 417 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + R C+ LILAPTREL QI + + A + + K +GG + I++ E
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G ++V TPGR+ D++ R+AL + + VLDEAD+ML GF + + +L A+ Q
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQT 252
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILV 842
+L SATMP + E+SR ++ DP R+ V
Sbjct: 253 MLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 149 bits (362), Expect = 1e-34
Identities = 84/248 (33%), Positives = 136/248 (54%), Gaps = 5/248 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F L +A+L ++ P+ +QQ AI +QG+ ++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 417 IDTSIR-----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + R + + L+L PTRELA Q+ + + + L K GG + I+ L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
SG+ +VV TPGR+ D+ + AL I V DEAD M GF I + KML Q
Sbjct: 123 SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQN 182
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
+L SAT P +V+ + ++DP+RI ++++ T I Q I ++ K+E L ++
Sbjct: 183 LLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDK-KMELLNEVFGV 241
Query: 942 LSIAQAVI 965
SI QA++
Sbjct: 242 ESIDQALV 249
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 149 bits (362), Expect = 1e-34
Identities = 91/253 (35%), Positives = 149/253 (58%), Gaps = 7/253 (2%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCI--QGRXVIAQAQSGTGKTATFSI 401
V +F+ + LK+ LL+G + GF KPS++Q+RA+ + Q + +IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 578
++L +ID + CQ L +APTREL QI +V I + + N K I G + DI +
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKG--LSPDILEG 164
Query: 579 ESGVHVVVGTPGRVYDMIT-RRALHAN--TIKLFVLDEADEML-SRGFKDQIHDVFKMLS 746
+ +++GTPG + T +L+ N +K+FVLDEAD ++ + F + + ++
Sbjct: 165 QINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRIKSKVT 224
Query: 747 ADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLC 926
+ Q++L SAT + V++ + F+ P ++ +ELTL+ IKQFYI ++ K L
Sbjct: 225 NNCQILLFSATYDERVMDFAHDFVPQPNEFSIKPQELTLKNIKQFYIQMKSSEDKYPKLI 284
Query: 927 XLYDTLSIAQAVI 965
+Y S+ Q +I
Sbjct: 285 DIYGMKSMGQCII 297
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 149 bits (361), Expect = 2e-34
Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 5/226 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L LL ++ P+ VQ +AI + G+ V+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 414 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
++ S + L+L PTRELA+Q+ + IA G L+ + A GG ++ + +L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
GV V+V TPGR+ D+ + A+ + ++ VLDEAD ML GF +++ VF L A Q
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+L SAT DD+ ++ +R PV I V T IKQ+ + ++
Sbjct: 182 TLLFSATFSDDIRAMAATILRGPVNISVSPPNATASKIKQWVVTVD 227
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 149 bits (361), Expect = 2e-34
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 5/219 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L A ++ G+ P+ +Q +AI + + ++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 417 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
I R +A+IL+PTRELA QI + ++ G L IGG +R+ +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV ++V TPGR+ D++ ++ L + K VLDEAD+ML GF + + ++ D Q
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQT 284
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+L SATM ++ +++ ++ DPV++ V E T++ I+Q
Sbjct: 285 LLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQ 323
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 149 bits (360), Expect = 2e-34
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
G + + +Q++AI + G+ +I QA++GTGKT F + IL++ID + QALI+APTR
Sbjct: 24 GITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTR 83
Query: 468 ELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR 638
ELA QI K ++ + +N A GG +V + +R+L+ H+VV TPGR+ D I R
Sbjct: 84 ELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRR 141
Query: 639 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 818
+ + + VLDEAD+ML GF I D+ Q +L SAT+P D+ ++++ +M
Sbjct: 142 ETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYM 201
Query: 819 RDPVRILVQKEELTLEGIKQ 878
+P I VQ EE+T++ I+Q
Sbjct: 202 DEPQMIQVQSEEVTVDTIEQ 221
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 149 bits (360), Expect = 2e-34
Identities = 80/227 (35%), Positives = 137/227 (60%), Gaps = 6/227 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L A+L + P +Q++AI ++G+ ++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 414 QIDTSI----RECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQ 575
+ T R AL+L PTRELA Q+ +V A + L K A GG ++ + Q
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L+ GV +++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+++ ++FK+L
Sbjct: 130 LQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
Q +L SAT+ DV ++ + DPV+I + EE ++ I+Q A+E
Sbjct: 189 QNLLFSATLGKDVDTITEFLLHDPVKIEIIAEEQNIDLIQQIAYAVE 235
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 149 bits (360), Expect = 2e-34
Identities = 87/255 (34%), Positives = 148/255 (58%), Gaps = 3/255 (1%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSIS 404
V TF+ + LK LL G YA G+ KPS +Q+ A+ IQ +IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+L +D SI QA+ ++PT+ELA Q +V+ +G N K I V +++
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN--- 185
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQV 761
V++GTPG++ + + ++ L +K+ VLDEAD ++ + +QI + ++L ++V+V
Sbjct: 186 --QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKV 243
Query: 762 ILLSATMPDDVLEVSRCFMRDP-VRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
L SAT V E+ + ++DP I ++++EL++E I Q++I K L +Y
Sbjct: 244 CLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIYG 303
Query: 939 TLSIAQAVISATPVA 983
+S+ Q+++ +A
Sbjct: 304 FISVGQSIVFVHTIA 318
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 149 bits (360), Expect = 2e-34
Identities = 83/209 (39%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + L +L GFE PS +QQ I + G V+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
QID S + Q L++APTRELA Q+ + + GG +R L+ G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VVVGTPGR+ D I R L+ + ++ VLDEADEML GF D + V L + Q L
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALF 185
Query: 771 SATMPDDVLEVSRCFMRDP--VRILVQKE 851
SATMP+ + +++ FM DP V+I V E
Sbjct: 186 SATMPEPIRRITKRFMNDPQEVKIKVNNE 214
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 148 bits (359), Expect = 3e-34
Identities = 85/243 (34%), Positives = 129/243 (53%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F M +K+ +L GFEKP+ +Q+ + +G+ +I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+D SI Q L++APTRELA QI + LG + +K +GG + + L SGV++
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
VV TPGR+ D++ + + + IK F LDEADE+L GF ++I + L Q +A
Sbjct: 123 VVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFTA 182
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
T + ++S+ + I + T E I Q ++ + KL TL D
Sbjct: 183 TFDEKTKKLSQEITNEAKMISMSSGLETTEKIDQNFVVVS-EEEKLITLVKFLDFKKPTA 241
Query: 957 AVI 965
+VI
Sbjct: 242 SVI 244
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 148 bits (359), Expect = 3e-34
Identities = 75/214 (35%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Frame = +3
Query: 261 ALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQI-DTSIRE 437
++L+ G++ P+ +Q+ AI + GR ++ QAQ+GTGKTA F++ +++++ D
Sbjct: 61 SILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELN 120
Query: 438 CQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPG 614
+ L++ PTRELA Q+ + + + N K A GGT+ R I L+ V VVVGTPG
Sbjct: 121 AKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTPG 180
Query: 615 RVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 794
R+ D I + N+I VLDEADEML+ GF + I + L + Q++L SATMP+++
Sbjct: 181 RIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEI 240
Query: 795 LEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+++ ++ DP IL++ + + I Q ++ ++
Sbjct: 241 RNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQ 274
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 148 bits (358), Expect = 4e-34
Identities = 83/217 (38%), Positives = 125/217 (57%), Gaps = 1/217 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF M L +L+G GF KPS +Q ++I G +I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
ID I Q +ILAPTRE+A QI++V+ +LG + K + IGG + D ++L S
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKL-SNC 143
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H+ +G PGRV +I + L + ++LFVLDEAD+++ F+ I+ ++ L + QVI
Sbjct: 144 HIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPPNRQVISS 203
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 881
SAT P D+ +M+ P+ + L G++QF
Sbjct: 204 SATYPGDLEIFLESYMQSPILSSADNDGPILVGLRQF 240
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 148 bits (358), Expect = 4e-34
Identities = 80/217 (36%), Positives = 128/217 (58%), Gaps = 1/217 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L + G GF+KPS +Q +AI G +I +++SGTGKT FS L+
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLVFSTIALE 84
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
++T+ Q LIL PTRE+A QI+ V+ ++G H+N K + IGG + +D+++ S
Sbjct: 85 TVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK-SSKC 143
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I++++ L Q+I+
Sbjct: 144 HIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYNSLPPRKQMIVS 203
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 881
SAT P ++ +M+ P + + E L G+KQF
Sbjct: 204 SATYPQELDTFLANYMQSPTHVTSENETPLLLGLKQF 240
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 147 bits (357), Expect = 5e-34
Identities = 81/248 (32%), Positives = 135/248 (54%), Gaps = 9/248 (3%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSIS 404
V F++ L A +++ GF P+ +Q++A+ + G I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+++ ID+++++ QAL+L+PTRELA Q+ + + LG + GG + R I ++
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD---- 752
G H+VV TPGR+ D + ++ + ++K VLDEADEMLS GFK+ + + D
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPDDSDS 222
Query: 753 ----VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLET 920
+ L SATM +V ++ ++ +P + V K T + I+Q Y ++ +K E
Sbjct: 223 VRAACRTWLFSATMSSEVRRLTSTYLENPETVSVNKVGGTADTIEQVYYTVK-NSYKTEV 281
Query: 921 LCXLYDTL 944
+ L TL
Sbjct: 282 IGRLLQTL 289
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 147 bits (357), Expect = 5e-34
Identities = 81/219 (36%), Positives = 125/219 (57%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ + +K +L GFEK +Q+ AI + GR V+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
I Q LI+APTRELA QI + V + + A GG ++ + L+ G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+V TPGR+ D I R ++ + + VLDEAD ML GF D I + + + + L SA
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSA 182
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
TMP ++L +S ++++P + L+ ++L+ EGI Q Y+ I
Sbjct: 183 TMPIEILRLSEEYLKNPKQFLLDADDLSGEGIDQSYLVI 221
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 147 bits (356), Expect = 6e-34
Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 1/196 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSISIL 410
+F+ + L L+ GF P+ +Q AI + G +IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
Q++ + AL+L PTRELA Q+ + +L + H GG ++ E +R LE G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++VGT GRV D I R +L + ++ F+LDEADEML+ GF + I +F + D +V++
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMF 226
Query: 771 SATMPDDVLEVSRCFM 818
SATMP +L ++ FM
Sbjct: 227 SATMPRQILSIASTFM 242
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 147 bits (355), Expect = 8e-34
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 1/198 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L +L F + + +Q RAI ++G+ + ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
+I+ + R QA+I+APTRELA QI + G + N IGG ++R+ I++L+
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS- 120
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VVGTPGRV D + R+ L + ++ +LDEADEML GFK++I +F+ +S DVQ+ L
Sbjct: 121 QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF 180
Query: 771 SATMPDDVLEVSRCFMRD 824
SAT V++++ +M +
Sbjct: 181 SATTSPKVMQIANDYMNE 198
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 147 bits (355), Expect = 8e-34
Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L A L S F +P+ +Q AI P + G+ ++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 417 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ T R+ +ALIL PTRELA QI + ++ + + +GG N R +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++VV TPGR+YD ++R ++ T+++ +LDE+D ML GF I + + A+ Q +L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLF 183
Query: 771 SATMPDDVLEVSRCFMRDPVRI 836
SAT+ V ++ +R+ VRI
Sbjct: 184 SATLESSVKQLVETHVRNAVRI 205
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 147 bits (355), Expect = 8e-34
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 2/204 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX-VIAQAQSGTGKTATFSISILQ 413
F+ + L +LL GFE P+ VQ++AI ++ ++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
+ID + R QALIL+PTREL QI + + A GG ++ E R ++ G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++V TPGR+ DMI RR + + I +LDEADEML+ GF + I ++ + L
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLF 183
Query: 771 SATMPDDVLEVSRCFMRDPVRILV 842
SATMP +V + + FM DP+ I V
Sbjct: 184 SATMPAEVARIGKQFMTDPIEITV 207
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 147 bits (355), Expect = 8e-34
Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 1/235 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCI-QGRXVIAQAQSGTGKTATFSISILQ 413
F A+ L+ + A GF++PS +Q++AI + Q +I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+I+ +++ QALIL PTRELA Q+ + + + GG + + R L+ GV
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VV TPGR I L ++++ VLDEADEML+ GF + + V K D V++ S
Sbjct: 124 LVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFS 183
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
ATMP + +++ +M + + I + E +T+E I Q + K LC + D
Sbjct: 184 ATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQ-VVYEAYPENKFAALCRIMD 237
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 146 bits (354), Expect = 1e-33
Identities = 76/182 (41%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
Frame = +3
Query: 351 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-K 527
+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G + +
Sbjct: 6 LIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGLR 65
Query: 528 CHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG 707
H IGGT D ++L+ H+ VGTPGR+ +I L TI+LFVLDEAD++L
Sbjct: 66 SHVFIGGTLFGPDRQKLKK-CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLDDT 124
Query: 708 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 887
F++Q++ ++ LS + Q++ LSAT P+ + + +MR+P+ + + ++L L GIKQ Y+
Sbjct: 125 FQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFVRLNPKDLALRGIKQLYV 184
Query: 888 AI 893
+
Sbjct: 185 EL 186
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 146 bits (353), Expect = 1e-33
Identities = 77/244 (31%), Positives = 131/244 (53%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L L+ + G+E+ + +Q+ ++ + G+ +IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 593
+ Q LIL PTREL +Q+ K + L + N K + GG R ++ + G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ + + +L + ++ VLDEAD ML GF+D+I + + Q +L S
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFS 185
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT P + +++ M+DP+RI + + I+Q + + +L L L D
Sbjct: 186 ATYPKKIATIAKRVMKDPLRIELDSQVHEESTIEQHFYKVTSESQRLLGLQLLLDKFKSE 245
Query: 954 QAVI 965
AV+
Sbjct: 246 SAVV 249
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 145 bits (352), Expect = 2e-33
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L ++L GF P+ +QQ+AI +QGR V+A AQ+GTGKTA + + ++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 414 QIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 575
+ RE +ALILAPTRELAQQ+ + H GGT++R Q
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L GV +++ TPGR+ D + + N +++ VLDEAD ML GF I + K + +
Sbjct: 124 LAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEER 183
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLY 935
Q +L SAT V ++ M++PV + V T + +KQ ++ K E L L
Sbjct: 184 QTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKR-KSELLAYLI 242
Query: 936 DTLSIAQAVI 965
+ + Q ++
Sbjct: 243 GSRNWQQVLV 252
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 145 bits (352), Expect = 2e-33
Identities = 76/223 (34%), Positives = 123/223 (55%), Gaps = 3/223 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX--VIAQAQSGTGKTATFSISI 407
TF + ++ G GF + VQ++ I+P + R ++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 584
+Q DT ++ QAL+L PTREL Q+ + +G ++ K GG ++ +L
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEELRK 121
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G VVV TPGR++D+I R A+ + + VLDEADEML GF+D+++ + + +
Sbjct: 122 GAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKNTL 181
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
L SATMP +V ++ +M+DP+ I+V + E + Y +
Sbjct: 182 LFSATMPREVAAIAANYMKDPLEIIVGRRNAGAENVDHIYYVV 224
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 145 bits (352), Expect = 2e-33
Identities = 81/219 (36%), Positives = 123/219 (56%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD+ L AL +G G+E + VQ+ + QG VI QA++G+GKTA F + IL++
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
S + QAL+LAPTRELA Q+ + L + GGT++ + + L GV +
Sbjct: 67 CQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGRV DM R + N+ K+ LDEAD ML GF I + + +++ Q +L SA
Sbjct: 126 IVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFSA 185
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
T P ++++ + FM +P +L EEL + I + + I
Sbjct: 186 TFPQEIIDAAHEFMNEPDFVLTNAEELDIPPIDLYSVRI 224
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 145 bits (352), Expect = 2e-33
Identities = 80/221 (36%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + + +L G+E P+A+Q I + G V+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 590
+ID + + QAL+L PTRELA Q+ + G +L+ GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VVVGTPGR+ D + R L + + VLDEADEML+ GF D + + QV L
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SATMP + ++S ++ DP + + + E I Q YI +
Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV 234
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 145 bits (351), Expect = 3e-33
Identities = 76/225 (33%), Positives = 126/225 (56%), Gaps = 4/225 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L A + G++ PS +Q +AI + G+ V+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 414 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV V+V TPGR+ D+ ++A+ N +++ VLDEAD ML GF I + ML A Q
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
++ SAT D++ E+++ + PV I V +KQ+ ++
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVD 226
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 145 bits (351), Expect = 3e-33
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 6/217 (2%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GFE + +Q + + G V+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTR
Sbjct: 23 GFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTR 81
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
EL Q+ + + +G ++ K A GG ++ I QL GVHV+V TPGR+ D I R +
Sbjct: 82 ELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTV 141
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 827
I VLDEADEML+ GF D I + + Q +L SAT+ +L ++R +MR+P
Sbjct: 142 DLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYMRNP 201
Query: 828 VRILVQKEELTLEGIKQFYI------AIELXXWKLET 920
+ V+K+ I +FY +EL W L +
Sbjct: 202 QVMRVEKKH--SPKIDEFYFKTREEDKVELLDWILSS 236
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 144 bits (350), Expect = 3e-33
Identities = 87/249 (34%), Positives = 132/249 (53%), Gaps = 5/249 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F+ LK LL GFE+PS VQ + I I G+ V+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GV 590
Q+ + L+L TRELA QI+ LG N K A GG DI L++
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 591 HVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQV 761
H++V TPGR +I + + I+ F++DE D +LS + + ++F L QV
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQV 218
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQ-KEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
++ S TM D+ + R F++D + I V+ +L L G++Q++I IE K+ L L D
Sbjct: 219 MMFSGTMSDESKKTCRKFLQDQIEIFVEDNSKLVLHGLEQYHIKIE-EKQKISVLRQLLD 277
Query: 939 TLSIAQAVI 965
+ Q +I
Sbjct: 278 QGNYNQVII 286
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 144 bits (349), Expect = 4e-33
Identities = 83/249 (33%), Positives = 135/249 (54%), Gaps = 2/249 (0%)
Frame = +3
Query: 225 VVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSIS 404
+V +FD + + A + G G + P+A+Q+ AI ++ + +I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 578
I Q+ID+S RE QALILAPT EL QI K + L + L IG N+ I +L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ H++VG+ GRV ++I R+ + ++TIK V+DEAD +L + + DV K D Q
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIKTTMRDRQ 180
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
+++ SA M + S+ +D I+++ E L I Y+ E K++ L L
Sbjct: 181 LMIFSAYMNQRAMAESKELTKDAEVIIIEDEILVNPNITHLYLIAEQRD-KMKVLRKLIA 239
Query: 939 TLSIAQAVI 965
+A+I
Sbjct: 240 ATKPKKAII 248
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 144 bits (349), Expect = 4e-33
Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 8/258 (3%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK+ L + GFE PS VQ +A+ + G ++AQA+SG GKTA F ++L+Q
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 417 IDTSIR----ECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 581
++ + CQA++L RELA QI++ +L A GG E+++QL+
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGGIPEDENVKQLK 157
Query: 582 SGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADV 755
V ++VGTPGR+ +I +A +K FV+DE D L + + ++F L +
Sbjct: 158 KEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEK 217
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILV-QKEELTLEGIKQFYIAIELXXWKLETLCXL 932
QV++ SATM D++ +V++ FM+D I V Q+ +LTL G+ QFY+ + K L +
Sbjct: 218 QVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYMNV-TEPEKTRRLAEI 276
Query: 933 YDTLSIAQAVISATPVAR 986
D + QA+I + V R
Sbjct: 277 LDVVEFNQAIIFTSSVER 294
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 143 bits (347), Expect = 8e-33
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 1/210 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V T + + A+ + G + S +Q +++ +QG+ VI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 408 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
L++I+ + QA++L PTRELA+Q+ Q+ A D N K GG + I+ L+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
H++VGTPGRV D + +R + +KL VLDEAD ML GF+D + +F VQ +
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTL 182
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEE 854
L SAT + + V++ ++ +PV V+ +E
Sbjct: 183 LFSATFTEQIERVAKQYLHNPVTCKVESQE 212
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 143 bits (346), Expect = 1e-32
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 6/221 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+FD++ L +L G+ +P+ +QQ+AI ++GR ++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 414 QIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 575
+ T R +ALIL PTRELA QI + V +LN + GG ++ + +
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L GV V+V TPGR+ D+ + A+ + +++ VLDEAD ML GF I V L A
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
Q +L SAT DD+ ++ + +P+ I V + + + Q
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ 222
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 143 bits (346), Expect = 1e-32
Identities = 84/243 (34%), Positives = 141/243 (58%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
++++ L LL G++ PS VQ +I + G+ ++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
I++S Q +IL P RELA QI + V + + +GGT++++DI ++ +GVHV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+VGTPGR+ D++ +R + + V DEAD++L F + + + +L + Q++L SA
Sbjct: 230 MVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLPREKQMLLYSA 289
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
T P V R +M++P+ I + K EL G+KQFY ++ KL L L LSI Q
Sbjct: 290 TFPYFVTGFIRRYMKNPLCINLMK-ELAPVGVKQFYTYVK-PSEKLLCLKSLLLRLSINQ 347
Query: 957 AVI 965
VI
Sbjct: 348 CVI 350
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 142 bits (345), Expect = 1e-32
Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F++ A+++G A G+++P+ +Q +AI P + G VI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 414 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
++ ++ R + L++APTRELA QI +LG + + GG N+ + IR+L SGV
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VVV PGR+ D I R + ++ ++DEAD M GF+ I + K L Q +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 771 SATMPDDVLEVSRCFMRDPVRILV 842
SATMP +V +++ +PV + V
Sbjct: 182 SATMPPEVRKLTLETQTNPVTVQV 205
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 142 bits (344), Expect = 2e-32
Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 2/246 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + L +L G+ P+ +Q+++I +QG+ ++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 414 QI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
++ T R+ +AL+L PTRELA QI + A G + K GG + L SG
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
+ ++V TPGR+ D+I++ + +++ FVLDEAD ML GF I + K+L A Q +
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLF 181
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLS 947
SATMP ++ ++ + P ++ V T++ I Q +E K + L L S
Sbjct: 182 FSATMPPEIETLANSMLTKPEKVEVTPASSTVDIISQQVYFVEKKE-KKDLLIHLLKDTS 240
Query: 948 IAQAVI 965
I +I
Sbjct: 241 IESVLI 246
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 142 bits (344), Expect = 2e-32
Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 4/225 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L + G++ PS +Q +AI + G+ V+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 414 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV V+V TPGR+ D++ + + N +++ VLDEAD ML GF I + +L A Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
++ SAT D++ E+++ + PV I V +KQ+ ++
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVD 226
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 142 bits (344), Expect = 2e-32
Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 5/254 (1%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
S V+ F + L LL +E P+ +Q R+I ++G ++ AQ+GTGKTA F
Sbjct: 53 SAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFV 112
Query: 399 ISILQQIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 563
+ IL +I + R C+AL+LAPTRELA QI G IGG
Sbjct: 113 LPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGP 172
Query: 564 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 743
R++ESGV ++V TPGR+ D + + + ++ VLDEAD+ML GF I + L
Sbjct: 173 QARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKL 232
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETL 923
Q ++ SATMP + ++ F+RDP + V E ++ I Q + + K + L
Sbjct: 233 PRQRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQ-QVLLLAPEEKKDKL 291
Query: 924 CXLYDTLSIAQAVI 965
L +++ +A++
Sbjct: 292 AWLLADVAVERAIV 305
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 142 bits (343), Expect = 2e-32
Identities = 73/223 (32%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCI-QGRXVIAQAQSGTGKTATFSISIL 410
TF+ + + + G+E P VQ+ I + + V+A AQ+GTGKTA F + +L
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLL 62
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESG 587
QQID R Q+LIL PTREL QI + +++ K GG+++ IR L+ G
Sbjct: 63 QQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRG 122
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
VH++V TPGR+ D++ R+ + +T+ V+DEADEML+ GF D I+ + + + +L
Sbjct: 123 VHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNTLL 182
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
SATM ++ +S+ ++++ I + ++ + +K ++
Sbjct: 183 FSATMSPEIARISKNYLQNAKEITIGRKNESTSNVKHVAYTVQ 225
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 142 bits (343), Expect = 2e-32
Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 14/258 (5%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L L++ +++P+ +Q +AI + G+ V+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 414 QI-----------DT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 551
Q+ DT + AL+L PTRELAQQ+ + + GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 552 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 731
++ E IRQL +G H++V TPGR+ D++ +RAL + + V DEAD ML GFKD+I +V
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEV 181
Query: 732 FKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWK 911
K L + Q +L SAT+ D +L SR +R P I V + T I + ++ K
Sbjct: 182 LKRLPSTRQTLLFSATLDDRMLSFSRRLLRSPQVIEVAQRNTTASSIVERVFNVDANR-K 240
Query: 912 LETLCXLYDTLSIAQAVI 965
LC L S Q++I
Sbjct: 241 CAMLCHLITQESWLQSLI 258
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 142 bits (343), Expect = 2e-32
Identities = 73/210 (34%), Positives = 122/210 (58%)
Frame = +3
Query: 264 LLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQ 443
+L G+ +P+ VQQ I ++ + ++ ++Q+G+GKTA+F I + + + + Q
Sbjct: 13 ILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCELANWDENKPQ 72
Query: 444 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 623
ALIL PTRELA Q+++ + +G K A G ++ + +L+ H+VVGTPGRV
Sbjct: 73 ALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVL 132
Query: 624 DMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEV 803
D I + L + + V+DEADEML+ GF +Q+ + K L + +L SAT+P D+ ++
Sbjct: 133 DHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKL 192
Query: 804 SRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SR +M++P I V+ LT I+ I +
Sbjct: 193 SRQYMQNPEHIEVKAAGLTTRNIEHAVIQV 222
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 141 bits (342), Expect = 3e-32
Identities = 71/196 (36%), Positives = 113/196 (57%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
G+E P+ VQ I +Q + ++ ++Q+G+GKTA+F I + + ++ + QAL+L PTR
Sbjct: 23 GYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTR 82
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
ELA Q+++ + +G K A G + +L+ H+VVGTPGRV D I + L
Sbjct: 83 ELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTL 142
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 827
+K V+DEADEML+ GF DQ+ + L +L SAT+P+DV +SR +M P
Sbjct: 143 SLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAP 202
Query: 828 VRILVQKEELTLEGIK 875
I ++ +T + I+
Sbjct: 203 THIEIKAAGITTDKIE 218
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 141 bits (342), Expect = 3e-32
Identities = 67/207 (32%), Positives = 121/207 (58%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ L +L + G+ PS VQ+ I ++G+ ++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
I+ QALI+ PTRELA Q++ + +G +C A G ++++ I +L+ VH
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VV TPGR+ D I R ++ +K V+DEAD+M ++GF +Q+ + L + V L S
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFS 183
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEE 854
AT+ +++ + +M D I +++ E
Sbjct: 184 ATIDEEIKYICEKYMLDYSVINIEENE 210
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 141 bits (342), Expect = 3e-32
Identities = 71/220 (32%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F+ + L A +L G+ +PSA+Q +AI ++G+ V+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 414 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + + +AL+L PTRELA Q+ + V G HL+ K GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G +++ TPGR+ D+ ++A+ + +++ VLDEAD ML GF I + +L Q
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 881
+L SAT ++ ++++ + +P+ I V T ++Q+
Sbjct: 186 LLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVSVEQW 225
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 141 bits (341), Expect = 4e-32
Identities = 77/227 (33%), Positives = 128/227 (56%), Gaps = 6/227 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L S + G+++P+A+Q +AI ++G +IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 414 QIDT----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH--ACIGGTNVREDIRQ 575
++ + AL+L PTRELA Q+ + V ++ K A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L G +VV TPGR+ D++ + AL +K VLDEAD ML GF D++ D+ +V
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNV 181
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
Q +L SAT PD V E++ +R+PV I V++E + + Q I ++
Sbjct: 182 QTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVD 228
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 141 bits (341), Expect = 4e-32
Identities = 71/219 (32%), Positives = 123/219 (56%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + LK +LS Y G++KP+ +Q +++ +QG+ + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+ ++ Q LIL P REL +QI + I LG L A + G +++ G V
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGAQV 126
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
+ TPGR+ D+ + L++N I + V+DEAD + GF++ + + K L VQ +L SA
Sbjct: 127 ISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTVLCSA 186
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
T DD+ S+ ++ PV I + + E ++++ +++
Sbjct: 187 TFTDDIKNFSKTLLKKPVIIEDRSNIGSEENLEEWAVSV 225
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 140 bits (340), Expect = 5e-32
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 3/242 (1%)
Frame = +3
Query: 216 GSQV--VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTA 389
G QV V + + L A ++ G+ + + VQ AI ++ + VIA+A +GTGKT
Sbjct: 5 GEQVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTF 64
Query: 390 TFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVRED 566
F I +++ ID QAL+LAPTRELA QIQ + L + C+ GG + +
Sbjct: 65 AFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQ 124
Query: 567 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 746
I L+ +VV TPGR+ D + RR + + ++ VLDEAD ML GF + + +
Sbjct: 125 ITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIK 184
Query: 747 ADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLC 926
+ + L SAT+ +V+++S + RDPV I+V+ +E I+Q+ I +E KLET+
Sbjct: 185 SRKNLGLFSATISREVMDISWVYQRDPVEIVVRPDEENKPDIQQYRIDLEGRGDKLETMV 244
Query: 927 XL 932
L
Sbjct: 245 AL 246
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 140 bits (340), Expect = 5e-32
Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+FD+ + +G G+ P+ +Q++ I + GR VI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 414 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
++ R +A+I+ PTRELA+QIQ V+ ALG + + GG + I++L GV
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+ V PGR+ D + R L + + +LDEAD+M GF + + ++ A Q +L
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLF 181
Query: 771 SATMPDDVLEVSRCFMRDPVRILV 842
SATMPD + ++R +R+P I +
Sbjct: 182 SATMPDAIRALAREALREPQTIQI 205
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 140 bits (339), Expect = 7e-32
Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 5/219 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSISIL 410
TF + ++ + G KP+ +Q++AI ++ I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 411 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC--HACIGGTNVREDIRQLES 584
ID + QALIL+PTREL QQI+K + +++ + A GG + + L+
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKR 122
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQV 761
H+V+ TPGR+ D+I R A+ + +K +LDEADEMLS GFK ++ + K + +D +
Sbjct: 123 TTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDRKT 182
Query: 762 ILLSATMPDDVLEVSRCFM-RDPVRILVQKEELTLEGIK 875
L SATMPD++ + + +M + RI + K L I+
Sbjct: 183 WLFSATMPDEIKRIVKTYMDANAPRIEINKNTLVNANIR 221
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 140 bits (339), Expect = 7e-32
Identities = 85/243 (34%), Positives = 132/243 (54%), Gaps = 3/243 (1%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG-RXVIAQAQSGTGKTATFSISILQQID 422
+ L LL G Y GF +PS +Q A+ + +IAQA +G+GKTATF++++L ++D
Sbjct: 117 LNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLGKVD 176
Query: 423 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 602
T I Q + L PTRELA+Q Q VV LG + + D G +++
Sbjct: 177 TRIIHPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVV----AQGDKYDKTIGSQIII 232
Query: 603 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG--FKDQIHDVFKMLSADVQVILLSA 776
TPG++ D + +R+ +KL V+DEADEM+ Q+ + K ++Q++L SA
Sbjct: 233 CTPGKMQDFLKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILLFSA 292
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQ 956
T ++V + + + +I V+KEELTL I+QFY+ KL L LY +SI Q
Sbjct: 293 TYHEEVRLFAEKIVPNANKINVKKEELTLNTIQQFYVICNDDADKLSFLSDLYACMSIGQ 352
Query: 957 AVI 965
++I
Sbjct: 353 SII 355
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 140 bits (338), Expect = 9e-32
Identities = 72/221 (32%), Positives = 122/221 (55%), Gaps = 1/221 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F +M L L G G+ P+ +Q++AI ++G +IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 417 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++T E ++LI+ PTRELA Q KV LG N K IGG+ + + L SG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
++V TPGR+ ++ + N +++ DEAD M GF +Q+ D+ +ML Q++L S
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFS 194
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
AT+P ++ E + ++ P I + EE + F+ ++
Sbjct: 195 ATLPRNLAEFLKNTLKQPEIIRLDTEERLSPDLDNFFYHVK 235
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 140 bits (338), Expect = 9e-32
Identities = 70/207 (33%), Positives = 123/207 (59%), Gaps = 4/207 (1%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTS----IRECQALIL 455
G+E+P+ +Q +AI ++G ++A+AQ+GTGKTA+F++ I++++ + R +AL+L
Sbjct: 23 GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVL 82
Query: 456 APTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMIT 635
APTRELA Q+ + G L + + GG V I++L+ G ++V TPGR+ D++
Sbjct: 83 APTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLR 142
Query: 636 RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 815
++A+ ++ VLDEAD ML GF D I + + D Q +L +AT + V ++ +
Sbjct: 143 QKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFY 202
Query: 816 MRDPVRILVQKEELTLEGIKQFYIAIE 896
+ +P +I V T + I+QF ++
Sbjct: 203 LNNPTKIKVTPRNSTAKQIRQFAYQVD 229
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 140 bits (338), Expect = 9e-32
Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 9/225 (4%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
S V +F + + A L + + P+ +Q I + GR V+A A +G+GKTA F+
Sbjct: 5 SSSVASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFA 64
Query: 399 ISILQQI------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNA--KCHACIGGTN 554
+ +LQ++ + S + + L+L PTRELAQQ+ ++ H N K A GG +
Sbjct: 65 VPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVS 124
Query: 555 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 734
V ++ L +G V+V TPGR+ D++ AL N + VLDEAD MLS GF D+++ V
Sbjct: 125 VNLQMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVL 184
Query: 735 KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLE 866
+ L A Q +L SAT P++V ++ + P+ +Q E E T+E
Sbjct: 185 EALPAKKQTLLYSATFPEEVRALTAKLLHQPLEYHLQSEQESTIE 229
>UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 07 contig 1, DNA
sequence - Ostreococcus tauri
Length = 506
Score = 140 bits (338), Expect = 9e-32
Identities = 82/249 (32%), Positives = 132/249 (53%)
Frame = -3
Query: 956 LCNRQCIIQXTQSFQLPXX*FNCNVKLFNTFQGKLFLLYKYAYRISHKASRYFQYIIRHG 777
L N + +Q + QLP + +V+L NTF+G+ L + A+R+ H+ +R + + R
Sbjct: 173 LRNGERFVQIAERVQLPLFLVDVDVELLNTFKGEFVTLDQNAHRLGHELARDLERLRRKR 232
Query: 776 SRE*YDLNIS*QHLEDIMDLVLETSGQHFISFIKNKKFDGVGMKRTTSYHIIYTTWSAHH 597
E +LN+ + ED++DL+LETSG+HFI F+K+K D V ++ T+ H++ +T
Sbjct: 233 RGENTNLNLRREQGEDVVDLILETSGKHFIGFVKSKDLDVVALQSATTKHVVNSTRGTDD 292
Query: 596 HMNTTLQLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 417
++T+L+ A IFT+ +A +A ++V+ + H LL+LLGQL QD+ L + +
Sbjct: 293 DVDTSLEDAGIFTNGRTADARVALHLKVVAEGAHDLLDLLGQLPRRRQDERLALGDGVVQ 352
Query: 416 LL*NRYREXXXXXXXXXXXXXXXXXLDARHYCALLDCRRFFKTXGVXAAQQCCFEVHGIE 237
L + E L RH LL+ R FKT V A+Q EVH +E
Sbjct: 353 GLEDTGAESGRLTGTGLRLLDHVKTLGERHNTTLLNGGRLFKTIRVDPAEQVLLEVHRVE 412
Query: 236 GXDNLRPSR 210
+ RP R
Sbjct: 413 RLVDFRPFR 421
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 139 bits (337), Expect = 1e-31
Identities = 76/219 (34%), Positives = 122/219 (55%), Gaps = 5/219 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F A+ + LL G A G +P +Q +AI ++G+ ++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 417 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
I + +ALILAPTRELA QI++ + + + +GG + I+++
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIA 208
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G+ V++ TPGR+ D++ + + + VLDEAD ML GF + + + K A+ Q
Sbjct: 209 PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQT 268
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
L SATMP ++ ++ +RDPVR+ V + T I Q
Sbjct: 269 ALFSATMPKEIASLAERLLRDPVRVEVAPQGATASEITQ 307
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 139 bits (337), Expect = 1e-31
Identities = 76/231 (32%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
+ ++ +F L + + P+ +Q + I + GR V+ AQ+GTGKTA+F+
Sbjct: 12 THLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFA 71
Query: 399 ISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 563
+ IL + I + + L+L+PTREL+ QI A G H+ IGG +
Sbjct: 72 LPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGR 131
Query: 564 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 743
+R L GV V+V TPGR+ D++ L +++ VLDEAD ML GF + I + L
Sbjct: 132 QVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKL 191
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
Q + SATMP D+ E++ +RDP R+ V T E I Q + ++
Sbjct: 192 PIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQVD 242
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 139 bits (337), Expect = 1e-31
Identities = 80/248 (32%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L A L G+E P+ +Q AI ++G ++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 417 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ R+ + LIL PTRELA QI + + A HLN K GG +R L+
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV +++ TPGR+ D+ ++ L + +++FVLDEAD ML GF I + +L
Sbjct: 126 GGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHN 185
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
+ SATMP ++ ++ + +P ++ V T E ++Q + ++ KL+ L +
Sbjct: 186 LFFSATMPHEIQTLANRILVNPKKVEVTPVSSTAEKVEQRVMFVD-KPQKLDLLLHILKD 244
Query: 942 LSIAQAVI 965
S+++ ++
Sbjct: 245 ESLSKVLV 252
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 139 bits (337), Expect = 1e-31
Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L A LS G+ + + VQ + + G V A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 590
+I S QAL+L PTRELA Q+ K + L N K GG + + + L
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H+VVGTPGR+ D + +++L +++K+ VLDEAD ML GF D I DV +D Q +L
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 771 SATMPDDVLEVSRCFMRDPVR--ILVQKEELTLEGIKQFY 884
SAT P ++ ++S R P R I EE +E ++FY
Sbjct: 185 SATYPQEIEQISARVQRQPQRFEIADDVEESAIE--QRFY 222
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 139 bits (337), Expect = 1e-31
Identities = 72/219 (32%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F A L +++ G+++P+ +Q+ I I G ++ AQ+GTGKTA FS+ I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 417 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
ID + ++LIL PTRELA QI + + D L K GG + + +E
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G+ ++V TPGR+ D+I ++ +++FVLDEAD ML GF + + L Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+L SATMP ++ ++ + DP +I + E +T++ + Q
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQ 222
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 139 bits (336), Expect = 2e-31
Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 6/228 (2%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
+ +F+ M L +++ + +PS++Q +A+ + GR ++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 408 LQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDI 569
LQ + IR AL+LAPTRELAQQI+K V A L + K +GGTN+ +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQR 236
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
+L +GV + V TPGR D + + + I VLDEAD ML GF+ QI ++ + L
Sbjct: 237 SELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE 296
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
Q +L SATMP ++ +++ ++ +PV++ V K + Q + +
Sbjct: 297 KHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKV 344
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 139 bits (336), Expect = 2e-31
Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 1/204 (0%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GF++P+ +Q+ +I +QG ++ QAQ+GTGKT F I +++++ + Q+LILAPTR
Sbjct: 21 GFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTR 79
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
ELA Q+ + + + GG + I+ L+ G +VVGTPGRV D + RR L
Sbjct: 80 ELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTL 139
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVQVILLSATMPDDVLEVSRCFMRD 824
+ I +LDEADEM++ GF D + + K+ + Q +L SATMP + + + FM+
Sbjct: 140 KTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKS 199
Query: 825 PVRILVQKEELTLEGIKQFYIAIE 896
P I E++ I++FY ++
Sbjct: 200 PKIIKTMNNEMSDPQIEEFYTIVK 223
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 138 bits (335), Expect = 2e-31
Identities = 76/221 (34%), Positives = 125/221 (56%), Gaps = 8/221 (3%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L + +L G+ P+ +Q + I + G+ V+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 414 QI----DTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 569
++ +TS+ + ALI+APTRELA QI + V G +L + GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
L++GV ++V TPGR+ D++ ++A++ + ++ VLDEAD ML GF I V +LS
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGI 872
Q ++ SAT ++ +++ ++ PVRI + E I
Sbjct: 186 QRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESI 226
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 138 bits (335), Expect = 2e-31
Identities = 75/220 (34%), Positives = 119/220 (54%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK + + GF++PS VQ+ AI ++G +IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 596
+ + L++ PTRELA Q+ + G K GGT + I +++ +
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQA-SI 120
Query: 597 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 776
VV TPGR+ D++ + N VLDEADEML GF D+I ++F L + Q ++ SA
Sbjct: 121 VVATPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSA 179
Query: 777 TMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
TMP+ + +++ + +P + + K E T I Q+Y ++
Sbjct: 180 TMPNGIRKLAEQILNNPKTVSITKSESTNSKITQYYYVVQ 219
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 138 bits (333), Expect = 4e-31
Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 8/223 (3%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TFD L A +L G+ P+ +Q +AI + GR V+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 414 ----QIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 569
Q +TS + ALIL PTRELA Q+ V A H + GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
+L GV +++ TPGR+ D + ++ + +++ VLDEAD ML GF + + +L
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+ Q +L SAT ++ +++ ++R+P I V + + Q
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQ 234
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 138 bits (333), Expect = 4e-31
Identities = 81/248 (32%), Positives = 130/248 (52%), Gaps = 5/248 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L LL G+ P+ +Q +AI + GR ++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 417 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ R + L+L+PTRELA QI + G H+ GG ++ L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
+GV VVV TPGR+ D + ++ H N +++FVLDEAD+ML GF I + L + Q
Sbjct: 187 AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQN 246
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
+ SATMP ++ +++ +++P ++ + T+E I Q I IE K L L
Sbjct: 247 LFFSATMPSEIGKLAGELLKNPAQVAITPSATTVERIDQSLIFIEAQR-KRPLLAELLAD 305
Query: 942 LSIAQAVI 965
S+ ++++
Sbjct: 306 KSVERSIV 313
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 137 bits (332), Expect = 5e-31
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 1/213 (0%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDT 425
M +L G GF++PS +Q +AI G +I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 426 SIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVV 602
I Q LILAPTRE+A QI +V ++G + + K IGG + D +++ + + V
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAV 119
Query: 603 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 782
G PGR+ +I + L ++LFVLDEAD+++ F+ I+ +F L QVI SAT
Sbjct: 120 GAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVIASSATY 179
Query: 783 PDDVLEVSRCFMRDPVRILVQKEELTLEGIKQF 881
P D+ + +M PV + E L G++QF
Sbjct: 180 PGDLEIFLQTYMCSPVLVSPNNNEPILIGLRQF 212
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 137 bits (332), Expect = 5e-31
Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 4/225 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F+A+ L+ L+ G+ + +Q+ AI + ++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 414 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
++ T ++ ++LI+ PTRELA Q+ V LN + A GG + I QL+
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV V++ TPGR+ D+ +RALH +++ V DEAD ML GF D + + +L Q
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQT 181
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+L SAT + +R + P I V T++ + Q + IE
Sbjct: 182 LLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIE 226
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 137 bits (332), Expect = 5e-31
Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISIL- 410
T+D M L + + A G+ P+ VQ R IQG V+ Q+Q+G+GKT F + L
Sbjct: 157 TWDEMALPEHVRNAVDAAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLA 216
Query: 411 ---QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
Q D + Q ++L PTRELA+Q+ ++ L GGT + + L
Sbjct: 217 NRFQPGDAAETGVQLIVLLPTRELAKQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALA 276
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GVH VVGTPGRV D I R++L + ++ VLDE DEMLS GF + I + + + Q
Sbjct: 277 RGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACPKERQT 336
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEEL 857
L SAT+P D+ ++R MR+P I++ +++
Sbjct: 337 CLFSATVPRDIARIARRDMREPEHIVLSGDDI 368
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 137 bits (332), Expect = 5e-31
Identities = 77/235 (32%), Positives = 127/235 (54%), Gaps = 1/235 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + + L G+++P+ +Q AI + G+ +I A++G+GKTA F+I ILQ
Sbjct: 42 TFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQ 101
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ + +LILAPTREL+ QI++ +I+LG + +GG ++ QL H
Sbjct: 102 KLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQLSKKPH 161
Query: 594 VVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++VG+PGR+ D + + TIK VLDEAD++LS F D ++ + L D L
Sbjct: 162 IIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLPKDKVTYLY 221
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLY 935
SATM + ++ + + P++I V + T E + Q Y+ I L C L+
Sbjct: 222 SATMTSKITKLQKVTLMKPIQINVNTKYHTSEHLIQKYLLIPLKFKYTYLACILW 276
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 137 bits (332), Expect = 5e-31
Identities = 79/233 (33%), Positives = 135/233 (57%), Gaps = 1/233 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX-VIAQAQSGTGKTATFSISILQ 413
F+ + L +L+ GFEKP+ +Q + I + ++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ + +A+IL PTRELA Q+ + +L + N K GG + I+ L++ +
Sbjct: 68 LVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNA-N 125
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ D I R L+ +K F+LDEADEML+ GF + + + D +++L S
Sbjct: 126 IVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFS 185
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXL 932
ATMP ++L +++ +M D I K ++ I+Q Y+ + + E LC L
Sbjct: 186 ATMPREILNLAKKYMGDYSFI---KAKIN-ANIEQSYVEVN-ENERFEALCRL 233
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 137 bits (331), Expect = 7e-31
Identities = 76/250 (30%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + L A + G+ P+ +Q I +QG+ ++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 414 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + + +L+L PTRELA Q++ A +L + A GG ++R +++L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV ++V TPGR+ D+I ++ + + +K+ VLDEAD ML GF I V + L + Q
Sbjct: 145 GGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQN 204
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDT 941
++ SAT + +++ + DPV I + I+ ++ K++ LC L T
Sbjct: 205 MMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDMAR-KVDLLCHLIKT 263
Query: 942 LSIAQAVISA 971
Q ++ A
Sbjct: 264 NKWKQVLVFA 273
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 137 bits (331), Expect = 7e-31
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Frame = +3
Query: 210 PTGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTA 389
P Q + TF+ M L L A F P+ VQ++AI P + GR ++A AQ+GTGKT
Sbjct: 20 PERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTL 79
Query: 390 TFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 566
F I L+ + DT Q LIL PTRELA Q+ V L +GGT+ R
Sbjct: 80 AFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQ 139
Query: 567 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 746
I+ + SG VVV TPGR+ D + RR + + +++ VLDEAD M+ GF I + + L
Sbjct: 140 IQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALP 199
Query: 747 ADVQVILLSATMPDDVLEVSRCFMRDPVRI 836
D Q + SATM V + + + + VR+
Sbjct: 200 RDKQTLCFSATMGPAVSGIVQDCLYNAVRV 229
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 137 bits (331), Expect = 7e-31
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 8/252 (3%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF L + A G+ +P+ +Q +AI + G V+ AQ+GTGKTA FS+ IL
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 414 QIDTSIRE--------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 569
++ E +ALIL PTRELA Q+ V + GG ++ I
Sbjct: 81 RLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQI 140
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
+ L GV +V+ TPGR+ D + +++++ +++ VLDEAD ML GF + + +L
Sbjct: 141 QTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCX 929
Q +L SAT ++ ++++ FM P I V + T E IKQ A++ K +C
Sbjct: 201 TRQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDKRMAVCH 260
Query: 930 LYDTLSIAQAVI 965
L + +++Q ++
Sbjct: 261 LIQSKALSQVIV 272
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 137 bits (331), Expect = 7e-31
Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQID- 422
M L A+ + P+ +Q +AI ++G +I AQ+GTGKTA F++ IL Q+D
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 423 --TSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ C Q L+L+PTRELA QI + G ++ + GG +R L+ GV
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
HV + TPGR+ D++ + + + K FVLDEAD ML GF + + L Q I
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFF 180
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+ATMP V +++ + +PVRI V E T E ++Q
Sbjct: 181 TATMPPKVAQLASGLLNNPVRIEVAPESTTAERVEQ 216
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 136 bits (330), Expect = 9e-31
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + + +LS G+ P+ +Q AI +QGR ++ AQ+G+GKTA F I +L
Sbjct: 45 TFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLD 104
Query: 414 QID--TSIREC-QALILAPTRELAQQIQKVVIALGDHLNAK-CHACIGGTNVREDIRQLE 581
++ TS + +ALIL PTRELAQQ+ V + C +GG I L+
Sbjct: 105 RLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALK 164
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV V+V TPGR+ D I + +++++ VLDEAD ML GF D I D+ + D Q
Sbjct: 165 KGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPIDRQT 224
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLE 866
I+ SAT V +++ F ++P R+ ++ E +E
Sbjct: 225 IMCSATWDGPVGKIAASFTKNPERVSIKVESAHIE 259
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 136 bits (330), Expect = 9e-31
Identities = 84/244 (34%), Positives = 132/244 (54%), Gaps = 4/244 (1%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX--VIAQAQSGTGKTATFSISILQQI 419
+ L LL G GF KPS +QQ A+ P I G +IAQA++G+GKTATF++++L ++
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAMLSKV 162
Query: 420 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 599
+ ++ QAL + PTRELA Q +V+ LG KC + ED Q H+
Sbjct: 163 NVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKCFLGVPQCPRYEDNDQ----YHLY 218
Query: 600 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR--GFKDQIHDVFKMLSADVQVILLS 773
VGTPG+ D + +R ++ + + VLDEADE++++ Q+ + VQ++L S
Sbjct: 219 VGTPGKTMDFLKKRIMNVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQIVLFS 278
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT D+V + I V++E+LTL+ I Q Y+ K L +Y ++ +
Sbjct: 279 ATFSDNVYNFATKIAPRAHVIQVKREQLTLDCIDQRYMICNDDEDKFNKLSEIYSSMIVG 338
Query: 954 QAVI 965
Q+VI
Sbjct: 339 QSVI 342
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 136 bits (330), Expect = 9e-31
Identities = 74/220 (33%), Positives = 121/220 (55%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + ++ A+L FE+P+ +Q+ AI ++G+ +I A +G+GKT F I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+I+ +AL+L PTRELA+Q+Q + H + GG + IRQLE
Sbjct: 63 KIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA-D 120
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
VVV TPGR+ D I R + +++ VLDEAD ML GF D + ++ +D Q ++ S
Sbjct: 121 VVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFS 180
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
AT+ D+ +S +M +P ++ K + + +KQ YI +
Sbjct: 181 ATVSKDIQYLSSKYMNNPSKVFA-KAYVDSDKLKQVYIDV 219
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 136 bits (329), Expect = 1e-30
Identities = 76/175 (43%), Positives = 104/175 (59%), Gaps = 1/175 (0%)
Frame = +3
Query: 336 IQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 515
+QGR + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 516 LNAKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 692
LN + A GGT V D++ L G V VV+GTPGR+ D+I R AL + ++ FVLDE D
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDV 123
Query: 693 MLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEEL 857
ML FK+ I ++ L + QV +SAT P +V E+S + + P I V+ EL
Sbjct: 124 MLDMNFKEDIDFIYSQLPEEKQVFFVSATFPKEVRELSHRYTKKPEFIKVESREL 178
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 136 bits (328), Expect = 2e-30
Identities = 68/90 (75%), Positives = 76/90 (84%)
Frame = +3
Query: 225 VVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSIS 404
VV FD M LK +LL G YA GFEKPSA+QQRAI+PCI+G VIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKV 494
ILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
Score = 36.3 bits (80), Expect = 1.7
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 906 WKLETLCXLYDTLSIAQAVI 965
WKL TLC LY+TL+I QAVI
Sbjct: 115 WKLPTLCDLYETLTITQAVI 134
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 136 bits (328), Expect = 2e-30
Identities = 71/207 (34%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Frame = +3
Query: 252 LKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQI---- 419
L AAL + + G+E + VQ A P ++GR ++ A++G+GKT F ++I ++
Sbjct: 7 LPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIANELLGGE 66
Query: 420 DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
DT + LI+APTRELA Q+ + + L + NA+ C+GG ++R++ R LE G
Sbjct: 67 DTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERRALERGA 126
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H+VVGTPGR+ D I R + + I+ VLDEADEML GF++++ + + + + ++
Sbjct: 127 HIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREELELILEDTPKERRTLMF 186
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKE 851
SAT+P + ++ + ++ +RI +
Sbjct: 187 SATVPKGIAALATRYQKNGLRITTDSD 213
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 136 bits (328), Expect = 2e-30
Identities = 73/250 (29%), Positives = 132/250 (52%)
Frame = +3
Query: 216 GSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATF 395
G Q +F ++ L + ++ G+E + +Q+++I ++GR ++ + +G+GKT F
Sbjct: 50 GFQSKTSFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAF 109
Query: 396 SISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 575
I I++ + + ALI+ PTRELA QI + +L + IGGTN+ D++
Sbjct: 110 LIPIIEHALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKV 169
Query: 576 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 755
L +HV+VGTPGR+ D+ R+ L N +K VLDE D ML GF + + + ++
Sbjct: 170 LSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQRE 229
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLY 935
Q +L SAT+ + + + +++PV + + T E I+Q I + K L L+
Sbjct: 230 QTMLFSATLEPNQKNLIQSLLKNPVEVKINTGVSTNENIEQGIIRVPEGKDKFGMLADLF 289
Query: 936 DTLSIAQAVI 965
++ + ++
Sbjct: 290 QNRAMDKVIV 299
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 136 bits (328), Expect = 2e-30
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + + + A G + A+Q+ A+ ++G +I QA +GTGKT F + +L+
Sbjct: 111 TFAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLE 170
Query: 414 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
Q+ + QAL++ PTREL Q+ K + A G + GG I L
Sbjct: 171 QVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQAAGSTRGVRVLPIYGGVAYEPQIEALR 230
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
SGV ++VGTPGR+ D+ ++ L + ++ VLDEAD ML GF D + + +L D Q
Sbjct: 231 SGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQT 290
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRI 836
+L SATMPD ++ +SR F+R PV I
Sbjct: 291 MLFSATMPDPIVALSRRFLRRPVTI 315
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 135 bits (327), Expect = 2e-30
Identities = 66/202 (32%), Positives = 120/202 (59%)
Frame = +3
Query: 282 AXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 461
A GF+KP+ VQ++A + G+ VIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 462 TRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR 641
+REL QI +V+ + + IGG NV++ + +L+ H++VGTPGRV+++I +
Sbjct: 81 SRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAK 140
Query: 642 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 821
L + +K VLDE D+++ ++ + + K D Q++ SAT+ + +V R +
Sbjct: 141 KLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQ 200
Query: 822 DPVRILVQKEELTLEGIKQFYI 887
+P + VQ+ + +K Y+
Sbjct: 201 EPEVLKVQRSKAEAGKVKHQYL 222
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 135 bits (327), Expect = 2e-30
Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 5/219 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ + +L G++ P+ +Q AI + G ++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 417 IDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
++ R+ ++LI+ PTRELA QI + A G H GG N L+
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G+ +++ TPGR+ D++ + LH I+ FVLDEAD ML GF I + L Q
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQS 263
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+ SATMP ++ ++ + +PV + V T+E I Q
Sbjct: 264 LFFSATMPPEITRLAASILHNPVEVSVTPVSSTVEIINQ 302
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 135 bits (327), Expect = 2e-30
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 3/218 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS---IS 404
TF + L + G+E P+ +Q AI P + GR V+ AQ+GTGKTA+F+ I+
Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71
Query: 405 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+L + R ++L+L PTRELA Q+ + H+ IGG + +E + ++
Sbjct: 72 MLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDK 131
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
GV V++ TPGR+ D R L N +K+ V+DEAD ML GF I +F ++ Q +
Sbjct: 132 GVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTRQTL 191
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
SATM ++ ++ F+ +P +I V+++ T I+Q
Sbjct: 192 FFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQ 229
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 135 bits (327), Expect = 2e-30
Identities = 75/215 (34%), Positives = 114/215 (53%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L L+ GFE P+ +Q +AI P + G+ VI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ +AL+LAPTRELA QI + + G + IGG + + L
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+V+ TPGR+ D + + + I+ VLDEAD ML GFK Q+ + + L Q +L S
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
ATM +V + +R +RDPVR+ V + T +Q
Sbjct: 184 ATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQ 218
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 135 bits (327), Expect = 2e-30
Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 1/216 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L L + F+ P+ +Q++A + GR V+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 414 QIDTSIREC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ S ++ + LI+ PTREL Q+ + + L ++N + GG N+ + L G+
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+VV TP R+YD++ RRA+ +I+ FV+DE D ML GFK Q++++ ++L + Q I+
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIMF 189
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
SATM + V E+ + P +I V LE I Q
Sbjct: 190 SATMTETVEEMIDTNFKAPEKISVAVSGTPLENIDQ 225
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 135 bits (327), Expect = 2e-30
Identities = 74/222 (33%), Positives = 127/222 (57%), Gaps = 5/222 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ LK ++ + GF +P+ +Q+R I ++ VI Q+Q+GTGKT + + +L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIAL-----GDHLNAKCHACIGGTNVREDIRQLE 581
ID + Q +I APTRELA QI + + + G + +KC IGGT+ ++ I +L+
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCF--IGGTDKQKSIDKLK 123
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
H+VVGTPGR+ D+I +AL + + V+DEAD ML GF + + + D+Q+
Sbjct: 124 IQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQM 183
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYI 887
++ SAT+P+ + + +M +P V+ +++T I+ I
Sbjct: 184 LVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILI 225
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 135 bits (327), Expect = 2e-30
Identities = 71/247 (28%), Positives = 128/247 (51%), Gaps = 2/247 (0%)
Frame = +3
Query: 216 GSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATF 395
G+ F +M L LL + GF+ P+ +Q++ I ++GR V+ A++G+GKTA F
Sbjct: 64 GNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAF 123
Query: 396 SISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 569
I +++ + +++ +ALIL+P RELA Q KVV + + A +GG ++ E
Sbjct: 124 VIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQF 183
Query: 570 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
L +VV TPGR + L ++I+ V DEAD + GF Q+ ++ L
Sbjct: 184 SLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPT 243
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCX 929
Q +L SAT+P +++ ++ ++DPV + + E ++ + +++ + LC
Sbjct: 244 SRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSVKTAEREAALLCI 303
Query: 930 LYDTLSI 950
L D + +
Sbjct: 304 LQDIIKL 310
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 135 bits (326), Expect = 3e-30
Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F++ L + GF +P+ +Q ++I P + G V+A AQ+GTGKTA F I +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 417 I----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+ + + L++APTRELA QI +V +G + + GG I +
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
G+ ++V TPGR++D+I ++ + +K+ VLDEAD ML GF I DV K L A Q +
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTL 182
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGI 872
SAT+ +++ +++ +++P+RI + ++ + I
Sbjct: 183 FFSATINEEIKKLAYSLVKNPIRIQIAPKDRVSKNI 218
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 135 bits (326), Expect = 3e-30
Identities = 99/269 (36%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Frame = +3
Query: 210 PTGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTA 389
P ++ F L+ +L + GFE PS VQ AI P ++ + VI QA+SG GKTA
Sbjct: 121 PRSGALLTRFSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTA 180
Query: 390 TFSISILQQID--TSIRECQALILAPTRELAQQIQK----VVIALGDHLNAKCHACIGGT 551
F +S+L ID + + QAL+L T ELA QI K I L D + K IGG
Sbjct: 181 VFVLSLLHMIDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPD-IKDKILCAIGGV 239
Query: 552 NVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR--GFKDQI 722
V +R L+S V + VGT GRV D++ R AL + IK VLDE D + FK +I
Sbjct: 240 TVSLHVRALKSKDVSIAVGTIGRVSDLVERGALDLSFIKYLVLDEFDALFKEEDNFK-KI 298
Query: 723 HDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP-VRILVQKEELTLEGIKQFYIAIEL 899
+ + A Q +L +AT + + +R +RD V ILV ++L L G+ Q+Y
Sbjct: 299 AGLISKMPATHQTLLFTATFTEHSEKFARSILRDGYVAILVDDKQLVLTGLMQYYFNAP- 357
Query: 900 XXWKLETLCXLYDTLSIAQAVISATPVAR 986
KL L L +QAVI A ++R
Sbjct: 358 EEKKLHILLDCLRLLPFSQAVIFARDISR 386
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 135 bits (326), Expect = 3e-30
Identities = 84/254 (33%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ LK LL G GF++ + VQ+ AI + R V+A+A++GTGKT +F I ILQ
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQM 82
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL---NAKCHACIGGTNVREDIRQLESG 587
++ + QAL+L TRELA Q KV L ++ + IGG ++ ED +
Sbjct: 83 VNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVSIAEDRERAREK 142
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQVI 764
VV+ TPGR+ +I L+ + VLDEAD +LS+ F I + S Q +
Sbjct: 143 PLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNFIRSIENCLAACSNKRRQTL 202
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
SAT + + E +RDP + ++ L L G+ Q+ ++ +KL+ L L L
Sbjct: 203 FFSATFSNSLKEFCDKHLRDPEYVNAMQDSLLLRGVTQYVCMLKEDRYKLKLLSLLMKHL 262
Query: 945 SIAQAVISATPVAR 986
I Q ++ V R
Sbjct: 263 KINQCIVFVNSVQR 276
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 135 bits (326), Expect = 3e-30
Identities = 70/225 (31%), Positives = 125/225 (55%), Gaps = 4/225 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+ + L LL GF +P+ +Q +AI + G+ ++A A +G+GKTA F + +L+
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLE 250
Query: 414 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ D+ R + LIL PTRELA Q Q V+ L N +GG + + +L
Sbjct: 251 RLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRK 310
Query: 585 GVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
VV+ TPGR+ D ++ + + +++ +LDEAD +L GFKD+I+ + + + Q
Sbjct: 311 SPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQT 370
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+L SAT+ D+V +++ ++ P+R+ V ++Q ++ I+
Sbjct: 371 MLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIK 415
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 135 bits (326), Expect = 3e-30
Identities = 76/212 (35%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Frame = +3
Query: 252 LKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSI 431
L A L+ G+ + VQ A+ + G+ V QA++G+GKTA F + +LQQID S+
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASL 69
Query: 432 RECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVVGT 608
+ QAL+L PTRELA Q+ + L L N K GG L+ H++V T
Sbjct: 70 FQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVAT 129
Query: 609 PGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPD 788
PGR+ D + + + + + V+DEAD ML GF D I DV + A Q +L SAT P+
Sbjct: 130 PGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPE 189
Query: 789 DVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
+ +S RDP+ I + + +QFY
Sbjct: 190 AIAAISGRVQRDPLAIEIDSTDALPPIEQQFY 221
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 134 bits (325), Expect = 4e-30
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 5/226 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + L A + ++ P+ +Q + I ++GR V+ AQ+GTGKTA ++ IL
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 414 QIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
Q+ + R+ AL+LAPTRELA QI A G HL + GG ++ L
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ G H++V TPGR+ D++ + + N +++FVLDEAD ML GF + + L Q
Sbjct: 123 KRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQ 182
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
+ SAT+ + E++ + PV + V + ++E I+Q + +E
Sbjct: 183 SLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSVEKIQQQLMFVE 228
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 134 bits (325), Expect = 4e-30
Identities = 62/106 (58%), Positives = 82/106 (77%)
Frame = +3
Query: 216 GSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATF 395
G +++ +FD M +K LL G YA FEKPSAVQQRA++P IQG VIAQAQSGTGKT+ F
Sbjct: 271 GVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMF 330
Query: 396 SISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 533
++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 331 ALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 134 bits (325), Expect = 4e-30
Identities = 78/239 (32%), Positives = 131/239 (54%), Gaps = 5/239 (2%)
Frame = +3
Query: 192 PGSTCXPT--GSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQA 365
P ++ PT S V TF ++ L + L + G++ P+A+Q + +QGR +IA A
Sbjct: 36 PDASACPTISASAVSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALA 95
Query: 366 QSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 545
++G+GKTA F + ILQ++ + ALILAPTREL QI + ++A+G L +G
Sbjct: 96 ETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVG 155
Query: 546 GTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQI 722
G + L HVVVG+PGRV D + + + ++K+ VLDEAD +LS F +
Sbjct: 156 GLDHNTQAIALAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAAL 215
Query: 723 HDVFKMLS--ADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+ + + A+ Q +L SATM V ++ + ++ PV++ V + ++Q ++ +
Sbjct: 216 QVLLEHVGSPAERQTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFLLV 274
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 134 bits (325), Expect = 4e-30
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 4/224 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F M L +L G + GF KP+ +Q + I + G+ V+ A +G+GKTA F + IL+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 414 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ + + +IL PTRELA Q V + L H + K +GG +++ +L
Sbjct: 354 RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRL 413
Query: 585 GVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
VV+ TPGR D + A A +TI++ VLDEAD ML GF D+++++ L Q
Sbjct: 414 RPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQT 473
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SATM V + R + PVRI+ ++ T + Q ++ +
Sbjct: 474 MLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRL 517
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 134 bits (324), Expect = 5e-30
Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRX-VIAQAQSGTGKTATFSISILQ 413
F L +L F++PS +Q AI P IQ + +IA +Q+G+GKTAT +I I
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGKTATCAIPICN 75
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+++T + + QALI+ PTRELA Q +G + K A GG + +L+ GV
Sbjct: 76 RVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSALQQSKLKHGVQ 135
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
V+V TPGR+ D I R + + ++ +LDEADEMLS GF D + + + L+ Q +L S
Sbjct: 136 VLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCLNHSHQTLLFS 195
Query: 774 ATMPDDVLEVSRCFMRDPVRI 836
ATMP + +++ M+DP +
Sbjct: 196 ATMPAAIQRLAKHHMKDPQEV 216
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 134 bits (324), Expect = 5e-30
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F+ + + LLS G+EKP+ +Q RAI + V A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 414 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
++ D R + L++APTREL+ QI + + + ++ +GG ++ + L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
GV +V+ TPGRV + + + L + +++FVLDEAD ML GF +I + +L Q
Sbjct: 122 EGVDIVIATPGRVLEHVDK-GLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQT 180
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
+L SAT D V ++S+ + P I K+ T++ I Q
Sbjct: 181 LLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQ 219
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 134 bits (324), Expect = 5e-30
Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF + + L G+ KP+ +Q AI +QGR +I A++G+GKT F++ IL
Sbjct: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+ + + AL+L PTRELA QI + ALG + + +GG + L H
Sbjct: 85 ALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH 144
Query: 594 VVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+++ TPGR+ D + + + +K V+DEAD +L+ F+ ++ + K++ D + L
Sbjct: 145 IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLF 204
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SATM V ++ R +++PV+ V + T+E ++Q+YI I
Sbjct: 205 SATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFI 245
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 134 bits (323), Expect = 6e-30
Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 6/252 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD + L +L G A F + + VQ I P ++GR VIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 417 IDT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV---REDIRQL 578
+ + A+I+APTRELAQQI + V + A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
G +V+ TPGR+ + + + + FVLDEAD ML GF D I ++K L + Q
Sbjct: 123 AMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQ 182
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
++ SATMP + +++ +RDP+ + + ++ YI E KL L L++
Sbjct: 183 TVMFSATMPPKIRKLAASILRDPIEVEIAISRPPESIMQSAYICHEAQ--KLPILRKLFE 240
Query: 939 TLSIAQAVISAT 974
+ + +I A+
Sbjct: 241 QSAPKRTIIFAS 252
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 134 bits (323), Expect = 6e-30
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 1/216 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F M L L F P+ VQ +AI ++G+ ++ AQ+GTGKT F+I ++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 414 QIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
++ AL++ PTRELAQQ+ ++ L + K IGG + + QL+
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRP 122
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+V+GTPGR+ D I R+ L N + VLDE D M GF QI + K L Q ++
Sbjct: 123 RIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLMF 182
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
SAT+P D+++++ + P R+ V+ E T IKQ
Sbjct: 183 SATLPGDIVKLAEKYSNQPERVSVENEATTSVKIKQ 218
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 134 bits (323), Expect = 6e-30
Identities = 80/257 (31%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Frame = +3
Query: 210 PTGSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTA 389
PT +Q F + L LL G+ KP+ +Q ++I ++GR ++ AQ+GTGKTA
Sbjct: 3 PTSAQA---FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTA 59
Query: 390 TFSISILQQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 554
+F++ +L ++ + R + L+LAPTREL QI + H + GG +
Sbjct: 60 SFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVS 119
Query: 555 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 734
++ LE GV ++V PGR+ D+I + + ++ VLDEAD+ML GF I +
Sbjct: 120 QVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIV 179
Query: 735 KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKL 914
L D +L SATMP + + +R+P ++ + T++ I Q + + K
Sbjct: 180 ATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAPPSSTVDRIAQSVMFLNASDKKA 239
Query: 915 ETLCXLYDTLSIAQAVI 965
L L T I QAV+
Sbjct: 240 ALLAQL-RTPGIGQAVV 255
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 134 bits (323), Expect = 6e-30
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 5/225 (2%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TFD L L P+ +Q+RAI + GR ++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 414 QIDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 578
+ T + R +ALIL+PTRELA QI + + L + GG +VR I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
GV ++V TPGR+ D++ +RA+ + +LDEAD ML GF + + D Q
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
++ SATMP + ++S+ + +P ++ V +T+E I Q ++
Sbjct: 185 SMMFSATMPKPIEDLSKKILTNPQKVSVTPAVVTVEKIAQSVFSV 229
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 134 bits (323), Expect = 6e-30
Identities = 74/231 (32%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V TF + L LL G++ P+ +Q +AI + G+ ++A A +G+GKTA+F + I
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168
Query: 408 LQQIDT--------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 563
+ + T R A++LAPTREL Q++ LG L K +GG +
Sbjct: 169 ISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSG 228
Query: 564 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 743
+ +++ GV +++GTPGRV D++++ + + I FVLDE D ML RGF+DQ+ +F+ L
Sbjct: 229 QLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
S QV+L SAT+ +V +V ++ + + + + + Q I ++
Sbjct: 289 S-QPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVD 338
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 134 bits (323), Expect = 6e-30
Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 8/211 (3%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LI 452
GF KPS +Q +AI + GR +I A++G+GKT ++ + +++ I + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 453 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 632
L+PTRELA QI+K ++ ++ K C GG+N+ I +L+ GV+V+V TPGR+ D++
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLL 526
Query: 633 TRRALHANTIK---LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEV 803
T++ VLDEAD M GF+ QI +F + D Q +L SAT P + ++
Sbjct: 527 AANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQL 586
Query: 804 SRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
++ + +P+ I+V + I Q I E
Sbjct: 587 AKKVLHNPIEIIVGGVSVVASEISQEIILFE 617
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 133 bits (322), Expect = 8e-30
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 2/216 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L+ LL GF P+ +Q++AI P +QG V+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 417 IDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ I + L+L+PTREL+ QI + AL L+ + A +GG ++ + L S
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
VVV TPGR+ ++ +LH +++ VLDEAD + G + QI + + L Q L
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQRALF 203
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
SATMP + E + + +PV I + E + +KQ
Sbjct: 204 SATMPTVLAEFTSAGLHNPVVIRLDSEMKLSDQLKQ 239
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 133 bits (322), Expect = 8e-30
Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 12/206 (5%)
Frame = +3
Query: 309 VQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQID------TSIREC----QALILA 458
+Q+ ++P +QGR +IA+A++GTGKT F I I++++ T+ R + L+LA
Sbjct: 128 IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLA 187
Query: 459 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR 638
PTRELA+Q++K + +L+ C GG + L GV VVVGTPGR+ D+I
Sbjct: 188 PTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEG 245
Query: 639 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 818
R+L ++ VLDEAD+ML+ GF++ + + + L Q +L SATMP V +++R ++
Sbjct: 246 RSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYL 305
Query: 819 RDPVRI-LV-QKEELTLEGIKQFYIA 890
+P+ I LV ++E EGIK + IA
Sbjct: 306 DNPLNIDLVGDQDEKLAEGIKLYAIA 331
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 133 bits (322), Expect = 8e-30
Identities = 71/224 (31%), Positives = 124/224 (55%), Gaps = 1/224 (0%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
+ F+ L L G+E P+ +Q + I + GR ++A A +G+GKTA F + +
Sbjct: 202 IIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPV 261
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 584
+ + + ALIL PTRELA QI++ L L K +GG + + +L+
Sbjct: 262 IMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQ 321
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
V V++ TPGR+ D+I + ++ +K+ V+DEAD ML GF+ Q+ D+ + + D Q I
Sbjct: 322 HVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTI 381
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
L+SAT+P + +++ + +PVRI+ ++ L ++Q + +E
Sbjct: 382 LVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVE 425
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 133 bits (322), Expect = 8e-30
Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F M L LL A GF++P+ +Q+ I + G+ + A A +GTGKTA F++ +L+
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278
Query: 414 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ R+ + L+L PTREL Q+ V L N +GG +V+ L +
Sbjct: 279 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRA 338
Query: 585 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
+++ TPGR+ D + + H ++I++ +LDEAD ML F++Q+ ++ +M S Q
Sbjct: 339 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQT 398
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SATM D+V +++ +++PVRI V ++Q +I I
Sbjct: 399 MLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 442
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 133 bits (321), Expect = 1e-29
Identities = 70/228 (30%), Positives = 134/228 (58%), Gaps = 2/228 (0%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
G+++P+ +Q+ AI ++G ++ QA +GTGKT F+I I++++ + +AL+L PTR
Sbjct: 19 GYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTR 78
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMITRRA 644
ELA Q+++ + L + + GGT+V++++ L++ V +++GTPGR+ D+I R+A
Sbjct: 79 ELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKA 138
Query: 645 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 824
L+ + ++ VLDE D+ML GF + I + L + + SAT+P + +++ F++
Sbjct: 139 LNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVPSRIELLAKRFLKS 198
Query: 825 PVR-ILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
+ + VQ EL I++ I + K+ L + DT + + +I
Sbjct: 199 DFKFVKVQSVELK-PNIEEKMIKLSSPGEKIHELMHIIDTHPMEKMLI 245
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 133 bits (321), Expect = 1e-29
Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 28/274 (10%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAI--MPCIQGRXVIAQAQSGTGKTATFSI 401
V +F+ + LK LL G Y GF +PS +Q+ A+ M + +IAQ+QSGTGKTA F +
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCL 96
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQL 578
++L ++ + + Q L +APT ELA QI +V+ +G + + + G + +R
Sbjct: 97 AMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADVRLVYAVRGNRI---VRGT 153
Query: 579 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLS-RGFKDQIHDV------- 731
+ +VVGTPG VYD + + L I +FVLDEAD M+S +G +DQ +
Sbjct: 154 KVQEQIVVGTPGTVYDWCAKQKVLDPKKITMFVLDEADVMISMQGHRDQSIRIQRWVLLA 213
Query: 732 ----------------FKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTL 863
++L Q++ SAT D V E + + +P I +++EE TL
Sbjct: 214 LLLWGSSVGPPPPPPPLRLLPKGCQMLFFSATFEDSVWEFAERIIPEPNYIRLKREEETL 273
Query: 864 EGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
+ I+QFYI K LC LY L+IAQ ++
Sbjct: 274 DNIRQFYIMCGSKEEKFSALCNLYGCLTIAQTIV 307
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 133 bits (321), Expect = 1e-29
Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 1/216 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF M L LL KP+ VQ +AI + G +IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+ E + LIL P+RE+AQQI KV + L + IGGT + QL+
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+++ TPGR+ D ++ L +++ VLDEAD ML GF Q+ + L Q ++ S
Sbjct: 153 LIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFS 212
Query: 774 ATMPDDVLEVSRCFMR-DPVRILVQKEELTLEGIKQ 878
A+ +V +++ FM+ D V + +K E +E +KQ
Sbjct: 213 ASFGSNVESIAQLFMKPDVVMVRSEKAEAPVESLKQ 248
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 133 bits (321), Expect = 1e-29
Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L L+S A G+E P+ +Q AI + G ++A AQ+GTGKTA F + L++
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 417 I--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 572
+ ++ + L+L PTRELA QI + V + +L + GG N+ +
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 573 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 752
L +G +VV T GR+ D + ++ + N +++ VLDEAD ML GF D I + +ML
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 210
Query: 753 VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
Q +L SAT + ++++ FM P + V + T ++Q IA++
Sbjct: 211 RQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVD 258
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 133 bits (321), Expect = 1e-29
Identities = 82/246 (33%), Positives = 126/246 (51%), Gaps = 9/246 (3%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V TF+ + ++S +EKP+A+Q +A+ + GR VI A++G+GKTA F + +
Sbjct: 227 VKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPM 286
Query: 408 LQQI--DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 572
+ I ++ + +I APTRELA QI + A GG + E +
Sbjct: 287 IVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFK 346
Query: 573 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 752
+L++G +VV TPGR+ DM+ +AL VLDEAD M GF+ Q+ + + D
Sbjct: 347 ELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPD 406
Query: 753 VQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI----ELXXWKLET 920
Q +L SATMP V +++R + DP+R+ V + + E I Q I E W LE
Sbjct: 407 RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEK 466
Query: 921 LCXLYD 938
L + D
Sbjct: 467 LPGMID 472
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 132 bits (320), Expect = 1e-29
Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 5/196 (2%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALI 452
G+EK + +QQ+AI +G + A AQ+GTGKTA FS+ ++QQ+ S + +ALI
Sbjct: 20 GYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALI 79
Query: 453 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 632
APTRELA+QI + A + N A GG + R LE+GV ++V TPGR+ + I
Sbjct: 80 FAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERMLENGVDILVATPGRLEEHI 139
Query: 633 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 812
+ I+ V DEAD +L GF + + + + + Q+++ SAT + E+S+
Sbjct: 140 ESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNPQIMMFSATTSSQLNELSKD 199
Query: 813 FMRDPVRILVQKEELT 860
+R P RI V++E T
Sbjct: 200 ILRKPKRIAVERENTT 215
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 132 bits (320), Expect = 1e-29
Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 3/235 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ + L A LL+ G ++PS +Q +AI P ++G+ V+ +Q+G+GKTA F + +LQ+
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 417 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ + +ALIL PTRELA Q V LG L+ K GGT+ + ++ + GV
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGV 141
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML-SADVQVIL 767
++V T GR+ D++ + L + VLDEAD +L F + + Q +
Sbjct: 142 DIIVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFPDQPPQTVF 201
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXL 932
SAT+P+ V+++++ R+PVR+ + E T + I+Q I +E K ET+ L
Sbjct: 202 CSATLPEPVMDLAKRVTRNPVRVEIAAESFTPKNIRQRAIFVEKDD-KPETVARL 255
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 132 bits (320), Expect = 1e-29
Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L +AL+ G+ P+ +Q +AI + G+ V+A AQ+GTGKTA+F + +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 417 IDTS--IR--ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+ IR +A+IL PTRELA Q+++ + +L A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
GV ++V TPGR+ DM T+RA+ + + + VLDEAD ML GF + I+ + + L Q +
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNL 182
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL 944
L SAT+ V +++ + D + I + ++ I Q+ ++ K L L
Sbjct: 183 LFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDK-KSALLSHLIQEQ 241
Query: 945 SIAQAVI 965
+ +QA+I
Sbjct: 242 NWSQALI 248
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 132 bits (320), Expect = 1e-29
Identities = 70/224 (31%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F +M L +L G GFE P+ +Q + I + G+ ++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 414 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ + + LIL PTRELA Q V + + CIGG +++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 585 GVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
+V+ TPGR D M + I++ V+DEAD ML GF D+++++ + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SATM D V ++ R + PVR+ V ++ T + + Q ++ +
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRV 483
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 132 bits (320), Expect = 1e-29
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F M L +L G + GF KP+ +Q + I + G+ V+ A +G+GKTA F + IL+
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 414 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ + + ++L PTRELA Q V L H + K +GG +++ +L
Sbjct: 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELRL 396
Query: 585 GVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
VV+ TPGR D + A A T+++ VLDEAD ML GF D+++++ L Q
Sbjct: 397 RPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSRQT 456
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SATM V ++ R + P RI+V ++ T + Q ++ +
Sbjct: 457 MLFSATMTSTVDKLIRVGLNKPARIMVDSQKQTAVTLAQEFVRL 500
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 132 bits (319), Expect = 2e-29
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 3/248 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F +M L +++ G G++ P+ +Q++ I + GR V+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 417 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ T + +ALIL+PTRELA Q Q+ + +G K +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
++V TPGR + ++ +I+ + DEAD + GF +QIH++ L + Q +L
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SAT+P ++E + +R+PV + + E + +K +I +C L +
Sbjct: 220 SATLPKVLVEFATAGLRNPVLVRLDVESKLPDELKLCFITCRPEEKLAVLMCLLKQVIKP 279
Query: 951 -AQAVISA 971
AQ VI A
Sbjct: 280 GAQTVIFA 287
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 132 bits (319), Expect = 2e-29
Identities = 72/228 (31%), Positives = 124/228 (54%), Gaps = 1/228 (0%)
Frame = +3
Query: 291 FEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRE 470
F + +Q I I+G VI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTRE
Sbjct: 23 FIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRE 82
Query: 471 LAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
L Q+ +++ L + + GG + + R LE+ H+++ TPGR D + R +
Sbjct: 83 LTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPHLIIATPGRAIDHLERGKI 142
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 827
+ +K+ LDEADEML GF++ + + K + + Q +L SAT+P + +++ + +D
Sbjct: 143 DLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFSATLPPFIKKIASKYQKDT 202
Query: 828 VRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVISA 971
+ V + + + I+Q Y ++ K + L L D A++ A
Sbjct: 203 KILQVPVKNIAVNAIEQNYFLVKEVD-KAKLLVRLLDLKKDYSAILFA 249
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 132 bits (319), Expect = 2e-29
Identities = 72/225 (32%), Positives = 126/225 (56%), Gaps = 6/225 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L +L GF KP+ +Q+R I ++ ++A+AQ+G+GK+A+F + IL+
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 417 IDTSIRECQA----LILAPTRELAQQIQKVVIALGDHLNAKCHAC--IGGTNVREDIRQL 578
+ E +A L+L PTREL QQI + G ++ K IGG + E + +
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLFNI 122
Query: 579 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 758
+ G ++V T GR D+++++ + + + FVLDEAD+ML GF +++ + + L Q
Sbjct: 123 QKGCDILVATSGRFLDILSKKQMILSHVDFFVLDEADKMLDFGFAEELELILEALGQKRQ 182
Query: 759 VILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SAT P +L ++ M++P+ + V+ EE T+E + Q I +
Sbjct: 183 NLLFSATYPPKMLFIASKIMQNPIEVSVEDEEPTVESVVQRAILV 227
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 132 bits (319), Expect = 2e-29
Identities = 77/215 (35%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F ++ L LL GF +P+ +Q AI P + GR V+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 417 -IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
ID +AL++ PTRELA QI + + L H A GG ++R GV
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
V++GTPGR+ D ++ VLDEAD ML GF I + K + A Q + S
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFS 182
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
ATMP + ++R +R+P + + + GI Q
Sbjct: 183 ATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQ 217
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 132 bits (319), Expect = 2e-29
Identities = 74/203 (36%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Frame = +3
Query: 261 ALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQI---DTSI 431
AL + G+ + VQ I +GR ++ AQ+G+GKTA F +++ + + D
Sbjct: 10 ALAAALEKKGYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQF 69
Query: 432 RECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 602
ALI+APTRELA Q+Q+ + L + +C+GG + R + + LE G H+VV
Sbjct: 70 NRPDLPMALIVAPTRELALQVQRELAWLYGEARGQIASCVGGMDPRAERKALERGCHIVV 129
Query: 603 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 782
GTPGR+ D I R AL + +K VLDEADEML GF++ + + A + +L SAT+
Sbjct: 130 GTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLLFSATV 189
Query: 783 PDDVLEVSRCFMRDPVRILVQKE 851
P + +++R F +D +RI E
Sbjct: 190 PRAIADIARRFQKDALRISTVSE 212
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 132 bits (319), Expect = 2e-29
Identities = 65/195 (33%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Frame = +3
Query: 261 ALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIREC 440
ALL GF + +QQ++I P ++G+ ++AQ+++G+GKT F I + D +
Sbjct: 13 ALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNKP 72
Query: 441 QALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGR 617
Q +++ PTRELA+Q+ + + + N K GG +R L G H+++GTPGR
Sbjct: 73 QTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPGR 132
Query: 618 VYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVL 797
+ D + + L +IK VLDEAD ML GF ++I + + Q +L SAT P +
Sbjct: 133 IQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFPPKIE 192
Query: 798 EVSRCFMRDPVRILV 842
+++ ++DP+ I V
Sbjct: 193 SLAKALLKDPLTIKV 207
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 132 bits (319), Expect = 2e-29
Identities = 85/231 (36%), Positives = 119/231 (51%), Gaps = 10/231 (4%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L L A GF+ PS VQ + G VIAQA+SGTGKT TF + L+
Sbjct: 38 SFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIALE 97
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIAL--------GDHLNAKCHAC--IGGTNVRE 563
++D R QAL LAPTRE A Q + + + GD C +GG V+E
Sbjct: 98 RVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGD-ARGGIETCLLVGGLPVKE 156
Query: 564 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 743
D +L S HVVVGTPGR M+ ++ + +L +LDEAD +LS F+ + + ML
Sbjct: 157 DRARLASQPHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALLSGTFERDVLFAYSML 216
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
QV SAT +L MR P ++++ + L+G++QFY IE
Sbjct: 217 PERKQVCAFSATYSKTLLGDLERLMRAPQKVMLCESTTALQGVRQFYSLIE 267
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 132 bits (319), Expect = 2e-29
Identities = 85/254 (33%), Positives = 141/254 (55%), Gaps = 8/254 (3%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQG--RXVIAQAQSGTGKTATFSI 401
+ +F + LK +L F+ P+ +Q+ A+ + +IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 402 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 578
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 735
Query: 579 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML--- 743
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 795
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETL 923
S VQ +L SAT + V+ + +++ + +++++EE L IKQFY+ K +
Sbjct: 796 SDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAI 855
Query: 924 CXLYDTLSIAQAVI 965
LY L++A +VI
Sbjct: 856 VNLYSGLAVASSVI 869
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 132 bits (319), Expect = 2e-29
Identities = 81/229 (35%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Frame = +3
Query: 291 FEKPSAVQQRAIMPCI--QGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 464
F PS +Q A+ P I + +IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PT
Sbjct: 180 FLGPSKIQAYAL-PIILSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPT 238
Query: 465 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRA 644
REL+QQ VV +LN K + + E + G + VGTPG+ D + R+
Sbjct: 239 RELSQQNYDVVCNFTKYLNVKVFLAV---PLCERYNK-SGGYQIYVGTPGKTLDFLKRKF 294
Query: 645 LHANTIKLFVLDEADEM--LSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 818
+ IKLFVLDEAD++ + Q+ + + L Q++L SAT D V + + F
Sbjct: 295 IDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQILLFSATYNDSVRKFADQFA 354
Query: 819 RDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
+I V++E+LTL+ +KQ+Y+ E K L LY +++I+Q VI
Sbjct: 355 PKATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSELYCSMTISQCVI 403
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 132 bits (318), Expect = 3e-29
Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Frame = +3
Query: 252 LKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSI 431
L A L G+ P+A+Q +AI + GR V+ AQ+G+GKTA F++ +LQQ+ +
Sbjct: 12 LLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAP 71
Query: 432 ----RECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQLESGVH 593
R + LIL PTRELA Q+ + + +L K GG ++ + L G
Sbjct: 72 TGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGAD 131
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VV TPGR+ D++ AL + + VLDEAD +L GF +++ + ++L Q + S
Sbjct: 132 IVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLFFS 191
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
AT P + ++ + DP+RI VQ T I Q I ++
Sbjct: 192 ATFPPAIEVLAESMLHDPLRIEVQAVPETKPDIAQRAIQVD 232
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 132 bits (318), Expect = 3e-29
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L L G+ + +Q AI + G+ V+ AQ+GTGKTA F++ ++ +
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 417 I---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
+ R +AL++APTRELA Q+ IGG + + ++L+ G
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRG 123
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
V V++ TPGR+ D R L ++ V+DEAD ML GF I +FKM Q +
Sbjct: 124 VDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLF 183
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SATMP ++ +++ F++DPVRI + T E I Q + +
Sbjct: 184 FSATMPPEITRLTKQFLKDPVRIEASRPATTNENITQLMVKV 225
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 132 bits (318), Expect = 3e-29
Identities = 91/275 (33%), Positives = 136/275 (49%), Gaps = 25/275 (9%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK LL GFE PS VQQ I I G ++ QA+SG GKTA F +SILQQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 417 IDTSIRE--------------------CQALILAPTRELAQQIQKVVIALGDHL-NAKCH 533
+DT+ + + L LA TRELA QI+ +L N +C
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 534 ACIGGTNVREDIRQL-ESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR- 704
GG ++ + I+ E + H+++GTPGR+ +I + L + I+ FVLDE D+ L +
Sbjct: 177 VVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKL 236
Query: 705 GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQF 881
+ + +F QV+ SATM ++ +V + F+++PV I + E +L L G+ Q
Sbjct: 237 DMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQH 296
Query: 882 YIAIELXXWKLETLCXLYDTLSIAQAVISATPVAR 986
Y+ ++ K L + D L Q +I V R
Sbjct: 297 YVKLQEKD-KTRKLIEILDALEFNQVIIFVKSVTR 330
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 131 bits (317), Expect = 3e-29
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 2/245 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L +L G E+P+ +Q++AI ++G+ VI +A++GTGKT + + I+++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA--CIGGTNVREDIRQLESGV 590
ID S E QA+IL+PT EL QI V+ L L K + +G N++ + +L++
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H++VGT GR+ ++I ++ + NTIK V+DE D++L + V K D Q ++
Sbjct: 124 HILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQKLIF 183
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SATM + LE + + I + E I+ Y +EL K++ L L +
Sbjct: 184 SATMNEKALETADELIGTSELIQAKAANKVNENIEHGYFQVELRD-KIDFLRKLIHAIGD 242
Query: 951 AQAVI 965
+ +I
Sbjct: 243 EKKII 247
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 131 bits (317), Expect = 3e-29
Identities = 74/209 (35%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F LK +L + G P+ +Q A+ ++G+ +I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 417 IDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
+ S R+ +AL+L PTRELA Q+ + A+ HL K A GGT + L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL--KVVAVYGGTGYGKQKEALLRG 120
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
VV TPGR D + + L + +++ VLDEADEMLS GF++++ + Q +L
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEE 854
SAT+P ++ +M++PV I V K+E
Sbjct: 181 FSATLPSWAKRLAERYMKNPVLINVIKDE 209
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 131 bits (317), Expect = 3e-29
Identities = 78/249 (31%), Positives = 135/249 (54%), Gaps = 3/249 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
FD + L + +L+ G+ + + VQQ+ I ++G+ ++A AQ+GTGKTA+F++ +L+Q
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 417 IDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
+ + +AL++ PTRELA Q+ + L K A GG N+ + +E G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
V ++V TPGR++D+I + L +++ V+DEAD ML GF I V ++++ + Q +L
Sbjct: 144 VDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTML 203
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLS 947
SAT D V ++S + P + V E T ++Q ++ K E L L +
Sbjct: 204 FSATYSDAVKQLSHKMLNQPEWVNV-AENTTASTVEQLVYRVDKRR-KAELLSELVGRNN 261
Query: 948 IAQAVISAT 974
Q ++ A+
Sbjct: 262 WRQVLVFAS 270
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 131 bits (317), Expect = 3e-29
Identities = 75/252 (29%), Positives = 139/252 (55%), Gaps = 1/252 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+++ + L F++PS VQ RAI + GR ++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 590
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV +
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SAT P ++ + F+RD + +++ L GIKQ+ +A LE L + ++
Sbjct: 202 SATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRY 259
Query: 951 AQAVISATPVAR 986
QA++ +++
Sbjct: 260 VQALVFCDQISK 271
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 131 bits (316), Expect = 4e-29
Identities = 61/150 (40%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ LK LL G + G+EKPS +Q+ +I + GR ++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 593
ID QAL+L PTRELA Q+ ++ I + HL K A GGTN+R+DI +L+ VH
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDE 683
VV+ TPGR+ D++ + + +++ V+DE
Sbjct: 211 VVIATPGRILDLMKKGVAKVDKVQIMVMDE 240
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 131 bits (316), Expect = 4e-29
Identities = 75/205 (36%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F+ L +L GF KP+A+Q + + + GR ++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 417 I--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
I +R AL+LAPTRELAQQIQ+V G +NA GG IR LE
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G +V+ TPGR+ D + R + VLDEAD ML GF+ QI + + D QV
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRI 836
++ SAT P +V ++ F+ D ++I
Sbjct: 304 LMWSATWPKEVRNLAEEFLNDYIQI 328
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 793
Score = 130 bits (315), Expect = 6e-29
Identities = 79/246 (32%), Positives = 126/246 (51%), Gaps = 3/246 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L ++ G+E P+ +Q +AI ++G V+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 417 IDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
+ S R ++LIL PTRELA Q+ + G +L IGG ++ E L G
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRG 412
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
V V++ TPGR+ D+ R L V+DEAD ML GF I + +L A Q +
Sbjct: 413 VDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLF 472
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLS 947
SATM ++ ++ F+R PV I V ++ I++ + + K TL L +
Sbjct: 473 FSATMAPEIRRLADAFLRHPVEITVSRQSSVATTIEEALVIVP-EDEKRRTLKKLLRREN 531
Query: 948 IAQAVI 965
+ A++
Sbjct: 532 VQSAIV 537
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 130 bits (315), Expect = 6e-29
Identities = 79/222 (35%), Positives = 119/222 (53%), Gaps = 7/222 (3%)
Frame = +3
Query: 192 PGSTCXPT-GSQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQ 368
PG+ P G + T A L AAL A G+E + VQ+ + + GR + AQ
Sbjct: 5 PGAAARPPFGRYMTQTDIAAPLAAALA----AKGYESLTPVQEAVLAEGVAGRDALVSAQ 60
Query: 369 SGTGKTATFSISILQQIDTSIRECQ------ALILAPTRELAQQIQKVVIALGDHLNAKC 530
+G+GKT F I+I QI AL +APTRELA Q+ + + L A
Sbjct: 61 TGSGKTVAFGIAIADQILQGADRLLFADTPIALAIAPTRELALQVARELGWLYGEAGAHI 120
Query: 531 HACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 710
C+GG + R + R L+ G H+VVGTPGR+ D I R +L + ++ VLDEADEML GF
Sbjct: 121 ATCVGGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEMLDLGF 180
Query: 711 KDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 836
++ + + + + ++ SAT+P ++ +++ F +D VRI
Sbjct: 181 REDLEFILGSAPEERRTLMFSATVPKEIEALAKEFQQDAVRI 222
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 130 bits (315), Expect = 6e-29
Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 1/201 (0%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 467
GF+ P+ +Q +AI +Q R VI AQ+G+GKTA F+I ILQ + + + A +LAPTR
Sbjct: 123 GFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTR 182
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRA 644
ELA QI + V ALG + + +GG ++ L HV+V TPGR+ D + +
Sbjct: 183 ELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKG 242
Query: 645 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 824
++ V+DEAD +L F I + + + + + +L SATM V ++ R +++
Sbjct: 243 FSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKN 302
Query: 825 PVRILVQKEELTLEGIKQFYI 887
PVR+ V + T+ +KQ Y+
Sbjct: 303 PVRVEVDTKYTTVSTLKQHYM 323
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 130 bits (315), Expect = 6e-29
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 8/222 (3%)
Frame = +3
Query: 246 MXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQI-- 419
+ + ++ + G EK +Q+ + P ++GR +I +A++GTGKT F I I+ +I
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 420 ----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 587
R L+LAPTRELA+Q++K L+ C GGT + + +RQL+ G
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYG 226
Query: 588 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 767
V V VGTPGRV D++ R AL+ + ++ VLDEAD+ML GF + + + + L Q ++
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMM 286
Query: 768 LSATMPDDVLEVSRCFMRDP--VRILVQKEELTLEGIKQFYI 887
SATMP + +++ ++ +P V ++ ++ +GI + I
Sbjct: 287 FSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI 328
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 130 bits (314), Expect = 8e-29
Identities = 73/200 (36%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Frame = +3
Query: 279 YAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILA 458
+A G+ + VQ++AI + GR +I Q+Q+G+GKT F + + ++ E Q LIL
Sbjct: 57 HAAGWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILT 116
Query: 459 PTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 626
PTRELA+QI +++ IA + GG + I L++G VV+GTPGR+ D
Sbjct: 117 PTRELARQIHEEFEQMKIATPRTNRMEAVLIYGGVGYQPQIDGLKNGAQVVIGTPGRILD 176
Query: 627 MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 806
I + A+T+++ VLDEADEMLS GF + D+ + + D + SATMP V V+
Sbjct: 177 HIKKDNFDASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDRVSYMYSATMPPKVRSVA 236
Query: 807 RCFMRDPVRILVQKEELTLE 866
R F+ DP + + +++++E
Sbjct: 237 REFLDDPGFLSLSTDKVSVE 256
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 130 bits (314), Expect = 8e-29
Identities = 65/205 (31%), Positives = 123/205 (60%), Gaps = 4/205 (1%)
Frame = +3
Query: 294 EKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTREL 473
+KP+ +Q R I ++GR +I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APTREL
Sbjct: 23 KKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTREL 82
Query: 474 AQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR 641
A QI + +++ D++ K GG + I +++ +V+GTPGR+ D+ +
Sbjct: 83 AWQIHEELKSILVKQPDYI--KTSLITGGMDRERQIGRVKVSPQIVIGTPGRILDLFKEQ 140
Query: 642 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 821
AL + +K +++DEAD+ML GF ++ + + L +Q+++ SAT+P+ + + +M
Sbjct: 141 ALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMMVFSATIPEKLQPFLKKYMN 200
Query: 822 DPVRILVQKEELTLEGIKQFYIAIE 896
+P V ++ T + I + ++
Sbjct: 201 NPRYAHVDPKQQTAKKIVHHTVPVK 225
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 130 bits (314), Expect = 8e-29
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + L ++L+ G A G+ P+ VQ RAI + GR ++A AQ+GTGKTA F++ +L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 417 IDTSIREC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
+ + L+L PTREL Q++ G + + GG + L +G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+V+ T GR+ D I + + +++++ +LDE D ML GF + + + + Q + S
Sbjct: 123 IVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQRQTLFFS 182
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIA 953
AT+P ++ +V+R +++P RI + + E +K + K + LC + D L
Sbjct: 183 ATIPPEIEDVARFALQNPERIEIGRARTVNESVKHAIYPVTFEQ-KFDLLCAILDKLDYE 241
Query: 954 QAVI 965
+I
Sbjct: 242 SVII 245
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 130 bits (314), Expect = 8e-29
Identities = 70/229 (30%), Positives = 128/229 (55%), Gaps = 5/229 (2%)
Frame = +3
Query: 222 QVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSI 401
Q+ F+++ L +L G + G+ KPS +Q I + G+ +IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 402 SILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CIGGTNVREDI 569
I++++ I + ++L PTRELA Q+ V + ++ +GG N+R+
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 570 RQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 746
+ L+S +V+ TPGR D I A + +++++ V+DEAD ML GF+D+++++ +L
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
Query: 747 ADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
++ Q +L SATM + + ++ PVRI++ + + Q ++ I
Sbjct: 408 SNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRI 456
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 130 bits (313), Expect = 1e-28
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 4/224 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF M L LL A F +P+ +Q+ I + G+ + A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 414 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
++ RE + L+L PTREL Q+ V L +GG +V+ L S
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRS 301
Query: 585 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 761
G V++ TPGR+ D + + N I++ +LDEAD ML F++Q+ ++ ++ S Q
Sbjct: 302 GPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQT 361
Query: 762 ILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
+L SATM ++V +++ +R+PVRI V ++Q ++ I
Sbjct: 362 LLFSATMSEEVKDLASVSLRNPVRIFVNSNTDVAPFLRQEFVRI 405
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 130 bits (313), Expect = 1e-28
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 10/225 (4%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F ++ L AL+ A G+ +P+ VQQRAI +QGR ++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 414 QI------DTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 563
++ D S R + + L+L PTRELA Q+ LN GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 564 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 743
++ + GV V+V PGR+ D+ + ++ + +++ VLDEAD ML GF + V L
Sbjct: 122 QVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARL 181
Query: 744 SADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
A Q +L SAT D+ +++ + +P RI V T+E I+Q
Sbjct: 182 PAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQ 226
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 130 bits (313), Expect = 1e-28
Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 7/221 (3%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F + + A + G GF + + +Q++A+ + G+ V QAQ+GTGKTATF ISI +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 417 IDTSIR-----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 581
+ + + +ALILAPTREL QI+K ALG + A GG + + L+
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 582 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA--DV 755
+G +V+GTPGR+ D + ++ ++ V+DEAD M GF + + + L
Sbjct: 123 AGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 756 QVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQ 878
Q +L SAT+ V+E++ FM P ++ V E++T E ++Q
Sbjct: 183 QNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQ 223
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 129 bits (312), Expect = 1e-28
Identities = 73/226 (32%), Positives = 120/226 (53%), Gaps = 1/226 (0%)
Frame = +3
Query: 291 FEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTR 467
F +P+ +Q++AI + G+ VI ++++G+GKTA + + +L ++ + +A+I+ PTR
Sbjct: 16 FTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTR 75
Query: 468 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 647
ELA Q +V LG K GG ++ + +L G +V+GTPGR+ D+ ++ L
Sbjct: 76 ELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVIGTPGRILDLYNQKYL 134
Query: 648 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 827
+ +K VLDEAD ML GF D I + Q ILLSAT+P +V ++ FM +P
Sbjct: 135 KLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILLSATLPAEVKTIANHFMNNP 194
Query: 828 VRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
+ +E IK Y E K TL + + +A++
Sbjct: 195 EFVDAGGDEAIPSSIKHLYTVSEKFD-KFSTLMSYIHSYNSRKAIV 239
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 129 bits (312), Expect = 1e-28
Identities = 65/194 (33%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Frame = +3
Query: 291 FEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQ------ALI 452
+++P+ VQ + GR ++ AQ+G+GKT + +++ + + I + ALI
Sbjct: 19 YDRPTPVQLAVLTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALI 78
Query: 453 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 632
+APTRELA Q+Q+ + L +H + + +C+GG + R + R+L +G H+VVGTPGR+ D +
Sbjct: 79 VAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQRELAAGAHIVVGTPGRLCDHL 138
Query: 633 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 812
R L + +K VLDEADEML+ GF++ + + + + +L SAT P ++ +++
Sbjct: 139 RRGRLDISELKAVVLDEADEMLNLGFREDMEFILETTPETRRTLLFSATFPRGIVALAKQ 198
Query: 813 FMRDPVRILVQKEE 854
+ + RI V +E
Sbjct: 199 YQQQAFRIEVAGDE 212
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 129 bits (312), Expect = 1e-28
Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 3/238 (1%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
TF+A+ L +L G P+ +Q+++I I GR ++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 414 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 584
+I R +AL+L+PTRELA QI + +L+ +GG + R L+
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKR 121
Query: 585 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 764
+VV TPGR+ D + R L L ++DEAD ML GF I+ + + L Q +
Sbjct: 122 NWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSL 181
Query: 765 LLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYD 938
L SAT P + E++ F D V + V+ E + I Q +I + KL L + D
Sbjct: 182 LFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKVLD 239
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 129 bits (311), Expect = 2e-28
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 2/244 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F++M L+ +L+ P+ +QQ+AI ++ R VI + +GTGKT + + + +
Sbjct: 5 FESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLFMK 64
Query: 417 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC--IGGTNVREDIRQLESGV 590
+ +E QALIL PT ELA Q+ + + L + K + IG N+ I +L+
Sbjct: 65 LSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKLKP 124
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
H++VGTPGR+ ++I +R + A+TIK ++DEAD +L D I + K + Q+++
Sbjct: 125 HIIVGTPGRILELIQKRKISAHTIKTIIIDEADRLLDDYNLDNIKAIIKTTLKERQIVMC 184
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSI 950
SAT+ +E + M++P+ I + + + I+ Y E K++ L L ++
Sbjct: 185 SATISKKTVERAMPLMKEPLVIESKADMGVPDAIEHLYFVSEQRD-KIDVLRKLVRMINP 243
Query: 951 AQAV 962
+A+
Sbjct: 244 KKAI 247
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 129 bits (311), Expect = 2e-28
Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Frame = +3
Query: 219 SQVVXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFS 398
++VV TF + ++ L+ G++ PS +Q A+ ++G+ VI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 399 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 542
I ILQ + + + + A +L+PTRELA QI + ALG ++ +C +
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLV 124
Query: 543 GGTNVREDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQ 719
GG + + L HV+V TPGR++D M + ++K VLDEAD +L+ F+
Sbjct: 125 GGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKS 184
Query: 720 IHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFY 884
++ + + + + + L SATM V ++ R +R+PV+I + T++ +KQ Y
Sbjct: 185 LNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQY 239
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 128 bits (310), Expect = 2e-28
Identities = 72/224 (32%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Frame = +3
Query: 300 PSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTREL 473
P+ VQ+++I ++G+ ++A AQ+GTGKTA F + I+Q + R ALIL PTREL
Sbjct: 30 PTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTREL 89
Query: 474 AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHA 653
AQQ+ + +H + + GGT++ +LE G +++ TPGR+ D + ++
Sbjct: 90 AQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNI 149
Query: 654 NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 833
+ + VLDEAD ML GF + + + L D Q++L SAT + ++ M PV
Sbjct: 150 SKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVE 209
Query: 834 ILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVI 965
+ V T E +KQ ++ K E L L + + Q ++
Sbjct: 210 VEVSPANTTAETVKQMVYPVDKKR-KRELLAYLIGSRNWQQVLV 252
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 128 bits (310), Expect = 2e-28
Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 2/207 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F +M L L+ G G++ P+ +Q++ I ++GR V+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 417 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ + +ALIL+PTRELA Q K + LG + K +GG ++ + +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
V+V TPGR + L N+I+ V DEAD + GF +Q+++ L + Q ++
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKE 851
SAT+P ++E +R + DPV I + E
Sbjct: 221 SATLPKLLVEFARAGLNDPVLIRLDVE 247
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 128 bits (310), Expect = 2e-28
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Frame = +3
Query: 288 GFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALI 452
GF KP+A+Q + + GR ++ AQ+G+GKT + + + I+ R + AL+
Sbjct: 176 GFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALV 235
Query: 453 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 632
LAPTRELAQQIQ+V I G + + + GG + R LE GV +V+ TPGR+ D +
Sbjct: 236 LAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFL 295
Query: 633 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 812
R VLDEAD ML GF+ QI + + + D QV++ SAT P +V +++
Sbjct: 296 ERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEE 355
Query: 813 FMRDPVRI 836
F+ + +++
Sbjct: 356 FLNNYIQV 363
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 128 bits (310), Expect = 2e-28
Identities = 83/254 (32%), Positives = 133/254 (52%), Gaps = 8/254 (3%)
Frame = +3
Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
V F LK LL GFE P+ VQ ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 408 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI--GGTNVREDIRQLE 581
L I+T + + L++ TRELAQQ + + LG + + C GG V +I+ +E
Sbjct: 132 LNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEPVSVNIQTIE 191
Query: 582 S-GVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSAD 752
+ +VVGTPGR+ D+I R+AL + +K F+LDEAD M+ + I D+F +
Sbjct: 192 TVKPQIVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSPQE 251
Query: 753 VQVILLSATMPDDVLEVSRCFMRDP---VRILVQKEELTLEGIKQFYIAIELXXWKLETL 923
Q + SAT + + F+ D I ++ E+L L+ +KQ+Y+ + K L
Sbjct: 252 KQFMAFSATFTESSRTSLKRFIADNKHIYEITIKPEQLFLDKLKQYYMKMP-EALKFHYL 310
Query: 924 CXLYDTLSIAQAVI 965
+ +T + Q +I
Sbjct: 311 RQILNTCKLNQCII 324
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 128 bits (310), Expect = 2e-28
Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 8/228 (3%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F AM L LL + F P+ +Q RAI + GR ++ A +G+GKTA F + IL+
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 414 QIDTSIR-----ECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIR 572
++ R C+ L+L PTRELA Q + V AL + L+ + +GG ++
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAH 342
Query: 573 QLESGVHVVVGTPGRVYDMITRR-ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 749
L + +++ TPGR+ D +T + + + + V+DEAD ML GF D++ ++ K
Sbjct: 343 TLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPR 402
Query: 750 DVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
Q +L SATM D V E+ + + P+R+ V + T G+ Q ++ I
Sbjct: 403 SRQTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTARGLTQEFVRI 450
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 128 bits (310), Expect = 2e-28
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 2/222 (0%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F AM L ALL GF+ P+ +Q++A+ +QG V+ A++G+GKTA F I ++++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 417 IDTSIRECQA--LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ T + A +I++P+RELA Q KVV G + + +GG ++ E + +
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNP 199
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+++ TPGR + L ++++ V DEAD + GF Q+ ++ L Q +L
Sbjct: 200 DIIIATPGRFLHLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTSRQTLLF 259
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIE 896
SAT+P ++E +R +++P I + E +K Y I+
Sbjct: 260 SATLPKSLVEFARAGLQEPKLIRLDAESKISPDLKSAYFTIK 301
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 128 bits (309), Expect = 3e-28
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Frame = +3
Query: 252 LKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSI 431
+ +AL A + + VQ+ + ++ AQ+G+GKT F ISI +
Sbjct: 7 IHSALAEAMSARSYITLTPVQEAVLKIEDSNSDLLVSAQTGSGKTLAFGISIATTLLAEK 66
Query: 432 RECQ------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
E A+I+APTRELA Q++K + L A+ +C+GG + R + R LESG H
Sbjct: 67 MEFDRPKIPLAIIIAPTRELALQVRKELEWLYVRTKAQFASCVGGMDPRAERRTLESGAH 126
Query: 594 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 773
+VVGTPGR+ D I R L + IK VLDEADEML GF++ + + + + +L S
Sbjct: 127 IVVGTPGRLRDHIERGVLRLSDIKAVVLDEADEMLDMGFREDLTFILGKAPVERRTLLFS 186
Query: 774 ATMPDDVLEVSRCFMRDPVRILVQKEE 854
AT+P ++++++ + +D VRI V ++
Sbjct: 187 ATVPTQIVKLAKTYQKDSVRISVSSKK 213
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 128 bits (309), Expect = 3e-28
Identities = 72/205 (35%), Positives = 116/205 (56%), Gaps = 6/205 (2%)
Frame = +3
Query: 282 AXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQIDTSI------RECQ 443
A G+ + + +Q AI ++G ++ AQ+GTGKTA F+I ILQ + R+ +
Sbjct: 18 AQGYSEATPIQAEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIR 77
Query: 444 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 623
AL+LAPTRELA QI + A G +L + GG R+LE G+ ++V TPGR+
Sbjct: 78 ALVLAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLL 137
Query: 624 DMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEV 803
D+I + + + ++ FVLDE D+ML G + + L + Q +L SATMP ++ ++
Sbjct: 138 DLINQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYLPRERQNMLFSATMPVEIEKL 197
Query: 804 SRCFMRDPVRILVQKEELTLEGIKQ 878
+ ++ PV+I + E L+ I+Q
Sbjct: 198 ADTILKGPVKIAMTPEFSPLDIIEQ 222
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 128 bits (309), Expect = 3e-28
Identities = 68/222 (30%), Positives = 118/222 (53%), Gaps = 2/222 (0%)
Frame = +3
Query: 234 TFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQ 413
+F + L L+ + KP+ +Q +AI P ++G +I AQ+G+GKTA F+I IL
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 414 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 593
++ A ILAPTRELAQQI++ +LG + + +GG N+ + R L H
Sbjct: 142 RLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH 201
Query: 594 VVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML-SADVQVIL 767
+++ TPGR+ D + + +K V+DEAD +L F + + K++ + + L
Sbjct: 202 IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYL 261
Query: 768 LSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAI 893
SATM + ++ R + +PV+ V + T++ + Q + +
Sbjct: 262 FSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV 303
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 128 bits (308), Expect = 4e-28
Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Frame = +3
Query: 237 FDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISILQQ 416
F +M L +L G G++ P+ +Q++ I ++GR ++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 417 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 590
+ + +ALIL+PTRELA Q K + LG K +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 591 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 770
+++ TPGR + L N I+ V DEAD + GF +QI+++ L Q +L
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 771 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTL-S 947
SAT+P +++ ++ + DPV + + E E + +I LC L + + +
Sbjct: 218 SATLPKLLVDFAKIGLNDPVLLRLDVENKIPEQLTLSFIICRPEQKLAILLCLLKNIIKN 277
Query: 948 IAQAVISA 971
Q VI A
Sbjct: 278 NTQTVIFA 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 970,622,151
Number of Sequences: 1657284
Number of extensions: 18895582
Number of successful extensions: 51145
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 46546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49398
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132819256952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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