Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K08.2
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   106   2e-24
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   1.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   4.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   6.4  
EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.         24   8.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  106 bits (254), Expect = 2e-24
 Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
 Frame = +3

Query: 228 VXTFDAMXLKAALLSGXYAXGFEKPSAVQQRAIMPCIQGRXVIAQAQSGTGKTATFSISI 407
           V +F+   L+  +++      + KP+ +Q+ AI   + GR ++A AQ+G+GKTA F + +
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPM 232

Query: 408 LQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 566
           +  +       +   R    +I+APTRELA QI             K     GGT V+  
Sbjct: 233 IHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQ 292

Query: 567 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 746
           ++ +  G HV+V TPGR+ D I R  +    +   VLDEAD ML  GF   I  V    +
Sbjct: 293 LQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHAT 352

Query: 747 ----ADVQVILLSATMPDDVLEVSRCFMRDPVRILV 842
                  Q ++ SAT P ++ E++  F+ + + + V
Sbjct: 353 MPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFV 388


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
 Frame = -2

Query: 729 HHGSGP*NLWTTFHQLH--QEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHG 556
           HHG       T   QL   Q+Q+     H+     S H    +  P  +H  P  +  H 
Sbjct: 226 HHGPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHH 285

Query: 555 HWCHQCKHGI 526
           H  HQ   G+
Sbjct: 286 HHHHQHGGGV 295


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
 Frame = -2

Query: 729 HHGSGP*NLWTTFHQLH--QEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHG 556
           HHG       T   QL   Q+Q+     H+     S H    +  P  +H  P  +  H 
Sbjct: 226 HHGPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHH 285

Query: 555 HWCHQCKHGI 526
           H  HQ   G+
Sbjct: 286 HHHHQHGGGV 295


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
 Frame = -2

Query: 729 HHGSGP*NLWTTFHQLH--QEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHG 556
           HHG       T   QL   Q+Q+     H+     S H    +  P  +H  P  +  H 
Sbjct: 178 HHGPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHH 237

Query: 555 HWCHQCKHGI 526
           H  HQ   G+
Sbjct: 238 HHHHQHGGGV 247


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 919 VSSFHXXNSIAM*NCLIPSRVSSSFCTSMRTGSLIKHRDTSNTSSG 782
           +S  H   +I + +C   S  SS+ C+S   GSL      ++ S+G
Sbjct: 224 LSPVHTAPAIPVSSCSPLSTASSASCSSSAAGSLCPTSPPASVSNG 269


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 840 VQKEELTLEGIKQFYIAIELXXWKLETLCXLYDTLSIAQAVISAT 974
           V+KE+L  E IKQ+   +     K  TL    D  +  QA + AT
Sbjct: 351 VEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRAT 395


>EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.
          Length = 64

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 589 FMWWWALQVVY 621
           FMWWW L+ ++
Sbjct: 24  FMWWWVLRHLF 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,041,498
Number of Sequences: 2352
Number of extensions: 21280
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)