Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K06.2
         (1296 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0432 + 3428920-3428934,3429007-3429111,3429341-3429397,342...   135   8e-32
01_03_0129 + 12831947-12832048,12832358-12832414,12832514-128327...   135   8e-32
08_02_1295 + 25950284-25950567,25950703-25950793                       31   2.0  
01_06_0409 + 29142409-29142870                                         31   2.6  
06_03_1036 + 27053480-27053729,27054616-27054704,27054881-270549...    30   4.6  
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536...    29   6.1  
12_01_1095 + 11436012-11436053,11436322-11436595,11470730-114707...    29   8.0  
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213...    29   8.0  

>05_01_0432 +
           3428920-3428934,3429007-3429111,3429341-3429397,
           3429499-3429702,3429790-3429849,3430797-3430923,
           3431420-3431520
          Length = 222

 Score =  135 bits (326), Expect = 8e-32
 Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
 Frame = +1

Query: 499 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 678
           + + +P    FH++F+  A++ YIL   F  SF+  FV+ + L + DFW VKN+SGR+LV
Sbjct: 44  ENYANPVTCLFHVLFKAGALVFYILFSLFVKSFVIIFVITVFLAALDFWVVKNVSGRILV 103

Query: 679 GLRWWNYVDDNGKSHWVFEARQ----SRVNRNESRLFWMGLTLCPLVWSTFFIFCLFGLK 846
           G+RWWN +DD G S W FE       +R+N+ +S LFW  L L    W    IF L  L+
Sbjct: 104 GMRWWNEIDDEGNSVWKFECLDGEALARMNKKDSWLFWWTLYLTAAAWIILGIFSLIRLE 163

Query: 847 FKWMLLVLIAXTLTGANLYGYIKCKFGAKESLK 945
             ++L+V +  TL+ AN+ G+ +C   AK++++
Sbjct: 164 ADYLLVVGVCLTLSLANIVGFTRCNKDAKKNIR 196


>01_03_0129 +
           12831947-12832048,12832358-12832414,12832514-12832717,
           12832799-12832858,12835026-12835152,12835801-12835889
          Length = 212

 Score =  135 bits (326), Expect = 8e-32
 Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
 Frame = +1

Query: 499 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 678
           + + +P   FFH++F+  A+  YIL   F  +F+  FV+ +LL + DFW VKN+SGR+LV
Sbjct: 38  ENYANPKTCFFHVLFKAGALAFYILSALFVTNFVIIFVITVLLAALDFWVVKNVSGRILV 97

Query: 679 GLRWWNYVDDNGKSHWVFEARQ----SRVNRNESRLFWMGLTLCPLVWSTFFIFCLFGLK 846
           GLRWWN +DD G S W FE       +R+N+ +S LFW  L L    W    IF L  L 
Sbjct: 98  GLRWWNEIDDEGNSVWKFECLDGESLARMNKKDSWLFWWTLYLTAAAWIVLGIFSLIRLH 157

Query: 847 FKWMLLVLIAXTLTGANLYGYIKCKFGAKESL 942
             ++L+V +  +L+ AN+ G+ KC   AK+++
Sbjct: 158 ADYLLVVGVCLSLSIANIVGFTKCNKDAKKNV 189


>08_02_1295 + 25950284-25950567,25950703-25950793
          Length = 124

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -1

Query: 582 PPTQDVHNDRRASEHQVEEHYVWMDKL------FISIILFTKCDGVIIKQRDLWHSWRCR 421
           P    +   RR S HQ +E+ VW+  L       I++ L  +    + +   +W   +C+
Sbjct: 44  PLVYAISKKRRESLHQGKENNVWVGDLALETNPHITVALVEQLVAFMDRSPWVWAPGKCK 103

Query: 420 IHSWMV 403
           +H+W +
Sbjct: 104 LHAWFI 109


>01_06_0409 + 29142409-29142870
          Length = 153

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -3

Query: 820 RKWTRPRGTASGPSRTGGSRSC*PGSDGPRTPSATCRCRPHSST 689
           R+W+RP   A G  R    R C  GS G R P+AT     H +T
Sbjct: 44  RRWSRPDLDAGGSGRR--RRQCGDGSGGGRGPAATWWLPCHLAT 85


>06_03_1036 +
           27053480-27053729,27054616-27054704,27054881-27054950,
           27055145-27055228,27055332-27055408,27055519-27055583,
           27055723-27055765,27055889-27055952,27056126-27056254,
           27056522-27056625,27056724-27056828
          Length = 359

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +1

Query: 844 KFKWMLLVLIAXTLTGANLYGYIKCKFGAKESLKSXXTEFMKQ 972
           +F W + +L+A  + G  + GY+  K+  +  + S     M Q
Sbjct: 296 RFGWFITILVASCVAGVGIAGYVFYKYRLRSYMDSEIMAIMSQ 338


>03_02_0067 +
           5364713-5364936,5365513-5367016,5367207-5368250,
           5368467-5368577,5368997-5369068,5369719-5369737,
           5369838-5371142,5371317-5371397,5372441-5372604,
           5373363-5373466,5373537-5373628,5374079-5374216,
           5374370-5374426,5374820-5375046
          Length = 1713

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 677 TSNRPLIFLTVQKSADSSRMTNTKLAMNESENHPHRMYTMIAEH 546
           TSN  L+  +V++  D+ R     L  NES +    +Y++I +H
Sbjct: 712 TSNSTLVAKSVERLVDAIRPNLCHLVRNESNSSSEFVYSVIGKH 755


>12_01_1095 +
           11436012-11436053,11436322-11436595,11470730-11470762,
           11470770-11471494
          Length = 357

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 738 PSEPGQQEREPPVLDGPDAVPLGLVHFLYILPFRTQ 845
           P EP QQ   PP L    +VPLG+V+ L + PFR++
Sbjct: 5   PPEPPQQ---PPQL----SVPLGIVNVLSLYPFRSE 33


>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
            28821481-28821702,28821796-28822034,28822107-28822632,
            28822726-28822999,28823098-28823737,28823833-28824061,
            28824299-28824565,28824700-28824963,28825045-28825689
          Length = 1274

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 22/76 (28%), Positives = 29/76 (38%)
 Frame = +1

Query: 697  YVDDNGKSHWVFEARQSRVNRNESRLFWMGLTLCPLVWSTFFIFCLFGLKFKWMLLVLIA 876
            + DD   S     AR S    N  RL    L L   V ST     +  +   W L ++I 
Sbjct: 799  WFDDPRNSSGALGARLSVDALNVRRLVGDNLALAVQVVSTLITGIVIAMIADWKLTLIIL 858

Query: 877  XTLTGANLYGYIKCKF 924
              +    L GY + KF
Sbjct: 859  CVIPLVGLQGYAQVKF 874


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,943,318
Number of Sequences: 37544
Number of extensions: 499634
Number of successful extensions: 1371
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)