Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K06.2
(1296 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence si... 196 2e-49
AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein. 192 2e-48
AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein. 188 5e-47
BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence si... 151 7e-36
AB074181-1|BAE45741.1| 164|Homo sapiens putative protein produc... 150 1e-35
BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processi... 31 6.9
BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein. 31 6.9
>BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence
similarity 18, member B protein.
Length = 205
Score = 196 bits (477), Expect = 2e-49
Identities = 88/179 (49%), Positives = 119/179 (66%), Gaps = 10/179 (5%)
Frame = +1
Query: 457 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 624
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LCG S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIIL 70
Query: 625 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 786
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 787 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIAXTLTGANLYGYIKCKFGAKESLKSXXTEF 963
L CP++W F LF + KW+ +V++ L GANLYGYI+CK +++ L S T +
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCKVRSRKHLTSMATSY 189
>AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein.
Length = 205
Score = 192 bits (469), Expect = 2e-48
Identities = 87/179 (48%), Positives = 118/179 (65%), Gaps = 10/179 (5%)
Frame = +1
Query: 457 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 624
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 625 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 786
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 787 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIAXTLTGANLYGYIKCKFGAKESLKSXXTEF 963
L CP++W F LF + KW+ +V++ L GANLYGYI+CK +++ L S T +
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCKVRSRKHLTSMATSY 189
>AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein.
Length = 181
Score = 188 bits (457), Expect = 5e-47
Identities = 85/169 (50%), Positives = 112/169 (66%), Gaps = 10/169 (5%)
Frame = +1
Query: 457 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 624
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 625 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 786
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 787 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIAXTLTGANLYGYIKCKFGAK 933
L CP++W F LF + KW+ +V++ L GANLYGYI+CK K
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCKVRKK 179
>BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence
similarity 18, member B2 protein.
Length = 276
Score = 151 bits (365), Expect = 7e-36
Identities = 73/148 (49%), Positives = 93/148 (62%), Gaps = 14/148 (9%)
Frame = +1
Query: 457 DDDTIAFG----EEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFV 612
+DDT A EE+ N+ + HP FFHL FR SAIIV +LC S SFI V
Sbjct: 7 NDDTEAVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMV 66
Query: 613 LVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRL 774
+ILLLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+
Sbjct: 67 TIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRI 126
Query: 775 FWMGLTLCPLVWSTFFIFCLFGLKFKWM 858
FW+GL C ++W F LF KW+
Sbjct: 127 FWLGLIACSVLWVIFAFSALFSFTVKWL 154
>AB074181-1|BAE45741.1| 164|Homo sapiens putative protein product
of Nbla10383 protein.
Length = 164
Score = 150 bits (363), Expect = 1e-35
Identities = 69/144 (47%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
Frame = +1
Query: 457 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 624
+D ++ EE+ N+ + HP FFHL FR SAIIV +LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIIL 70
Query: 625 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 786
LLS DFW VKN++GRL+VGLRWWN++D++GK HWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKGHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 787 LTLCPLVWSTFFIFCLFGLKFKWM 858
L C ++W F LF KW+
Sbjct: 131 LIACSVLWVIFAFSALFSFTVKWL 154
>BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processing
factor 40 homolog B (S. cerevisiae) protein.
Length = 871
Score = 31.5 bits (68), Expect = 6.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 693 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 812
E G+Q+Q P P Q PPV GP VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216
>BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein.
Length = 788
Score = 31.5 bits (68), Expect = 6.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 693 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 812
E G+Q+Q P P Q PPV GP VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,892,472
Number of Sequences: 237096
Number of extensions: 2874362
Number of successful extensions: 6746
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6741
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18660671970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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