Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K06.2
         (1296 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical p...   155   5e-38
U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical p...   155   5e-38
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    31   2.3  

>U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical
           protein C34D4.4b protein.
          Length = 205

 Score =  155 bits (377), Expect = 5e-38
 Identities = 66/152 (43%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
 Frame = +1

Query: 499 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 678
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 26  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 85

Query: 679 GLRWWNYVDDNGKSHWVFEARQ--SRVNRNESRLFWMGLTLCPLVWSTFFIFCLFGLKFK 852
           GLRWWN+VD +G +HW FE+ +  +R    + R+FW+GL + P  W  F +     LKF+
Sbjct: 86  GLRWWNFVDADGNNHWKFESAKDMTRFATIDRRVFWLGLVVGPAAWIFFVVTAFLTLKFE 145

Query: 853 WMLLVLIAXTLTGANLYGYIKCKFGAKESLKS 948
           WM++ L+   +  ANL+GY++C++   E + S
Sbjct: 146 WMIVALLGALMNMANLWGYLRCRWNNTEQMTS 177


>U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical
           protein C34D4.4a protein.
          Length = 247

 Score =  155 bits (377), Expect = 5e-38
 Identities = 66/152 (43%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
 Frame = +1

Query: 499 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 678
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 68  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 127

Query: 679 GLRWWNYVDDNGKSHWVFEARQ--SRVNRNESRLFWMGLTLCPLVWSTFFIFCLFGLKFK 852
           GLRWWN+VD +G +HW FE+ +  +R    + R+FW+GL + P  W  F +     LKF+
Sbjct: 128 GLRWWNFVDADGNNHWKFESAKDMTRFATIDRRVFWLGLVVGPAAWIFFVVTAFLTLKFE 187

Query: 853 WMLLVLIAXTLTGANLYGYIKCKFGAKESLKS 948
           WM++ L+   +  ANL+GY++C++   E + S
Sbjct: 188 WMIVALLGALMNMANLWGYLRCRWNNTEQMTS 219


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -2

Query: 683 SPTSNRPLIFLTVQKSADSSRMTNTKLAMNESENHPHRMYTMIAEHRNTRWKNTM 519
           +P SN  L     ++  +   M   K+  +E++N+P R   M+A   N R  NT+
Sbjct: 286 NPPSNASLKRRATEEFGNDGPMKQAKIEGSENDNNPMRKLEMMANSSNFRGGNTI 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,051,055
Number of Sequences: 27780
Number of extensions: 422204
Number of successful extensions: 1194
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3611117266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)