Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_K02.2
(1281 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 231 1e-60
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 231 1e-60
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 231 1e-60
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 116 4e-26
07_03_1357 - 25982861-25983068,25983354-25983361 61 2e-09
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.64
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 7.9
02_05_1008 - 33461225-33462334 29 7.9
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 231 bits (564), Expect = 1e-60
Identities = 110/156 (70%), Positives = 131/156 (83%)
Frame = +2
Query: 176 LTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRI 355
L LKL+G GLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR+ R
Sbjct: 26 LDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRY 85
Query: 356 GVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 535
G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNI
Sbjct: 86 GLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNI 145
Query: 536 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 643
PSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 146 PSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 181
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 231 bits (564), Expect = 1e-60
Identities = 110/156 (70%), Positives = 131/156 (83%)
Frame = +2
Query: 176 LTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRI 355
L LKL+G GLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR+ R
Sbjct: 49 LDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRY 108
Query: 356 GVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 535
G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNI
Sbjct: 109 GLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNI 168
Query: 536 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 643
PSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 169 PSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 204
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 231 bits (564), Expect = 1e-60
Identities = 110/156 (70%), Positives = 131/156 (83%)
Frame = +2
Query: 176 LTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRI 355
L LKL+G GLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG ALLRR+ R
Sbjct: 242 LDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRY 301
Query: 356 GVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 535
G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNI
Sbjct: 302 GLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNI 361
Query: 536 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRK 643
PSF+VR++S KHIDFSL SPFGGG PGRVKRKN +K
Sbjct: 362 PSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKK 397
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 116 bits (279), Expect = 4e-26
Identities = 62/107 (57%), Positives = 75/107 (70%)
Frame = +2
Query: 188 LKLIGAXGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLD 367
LKL G GLR+K E+WRV+ ELLTL+EK+P+R+FEG ALLR + R G+L
Sbjct: 30 LKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEALLRHMNRYGLLG 78
Query: 368 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 508
E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LIRQ HI
Sbjct: 79 EGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 61.3 bits (142), Expect = 2e-09
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +2
Query: 509 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKN 634
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN 44
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.64
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +2
Query: 290 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 457
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 458 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 550
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 424 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 552
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 7.9
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +2
Query: 368 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 547
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 548 VRLDSGKHIDFSLKSPFGGGR 610
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,937,897
Number of Sequences: 37544
Number of extensions: 375303
Number of successful extensions: 1045
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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